RNA–Protein interactions for RNA: ENST00000507594.1

SMAD1-207, Transcript of SMAD family member 1, humanhuman

TSL 4

Gene SMAD1, Length 558 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-207ENST00000507594 ZMYM1Q5SVZ6 1142 aa10.83□□□□□ -0.68
SMAD1-207ENST00000507594 PNMA8AQ86V59 439 aaPredicted RBP10.83□□□□□ -0.68
SMAD1-207ENST00000507594 ZSCAN29Q8IWY8 852 aaPredicted RBP10.83□□□□□ -0.68
SMAD1-207ENST00000507594 LCORLQ8N3X6 602 aa10.83□□□□□ -0.68
SMAD1-207ENST00000507594 KCNV2Q8TDN2 545 aa10.83□□□□□ -0.68
SMAD1-207ENST00000507594 SH3RF3Q8TEJ3 882 aaPredicted RBP10.83□□□□□ -0.68
SMAD1-207ENST00000507594 DCPSQ96C86 337 aaKnown RBP10.83□□□□□ -0.68
SMAD1-207ENST00000507594 SEC62Q99442 399 aaKnown RBP10.83□□□□□ -0.68
SMAD1-207ENST00000507594 PUS7LQ9H0K6 701 aaKnown RBP10.83□□□□□ -0.68
SMAD1-207ENST00000507594 TAF1DQ9H5J8 278 aaPredicted RBP10.83□□□□□ -0.68
SMAD1-207ENST00000507594 NMRK2Q9NPI5 230 aa10.83□□□□□ -0.68
SMAD1-207ENST00000507594 ANO2Q9NQ90 1003 aa10.83□□□□□ -0.68
SMAD1-207ENST00000507594 GGA3Q9NZ52 723 aa10.83□□□□□ -0.68
SMAD1-207ENST00000507594 ECM29Q5VYK3 1845 aa10.83□□□□□ -0.68
SMAD1-207ENST00000507594 NAV1Q8NEY1 1877 aa10.83□□□□□ -0.68
SMAD1-207ENST00000507594 GAKO14976 1311 aa10.83□□□□□ -0.68
SMAD1-207ENST00000507594 CCDC171Q6TFL3 1326 aa10.83□□□□□ -0.68
SMAD1-207ENST00000507594 RAD50Q92878 1312 aa10.83□□□□□ -0.68
SMAD1-207ENST00000507594 GPR75-ASB3A0A0A6YYF3 556 aa10.82□□□□□ -0.68
SMAD1-207ENST00000507594 TCRBV5S4A2TA0A5A2 114 aa10.82□□□□□ -0.68
SMAD1-207ENST00000507594 WNT10BO00744 389 aa10.82□□□□□ -0.68
SMAD1-207ENST00000507594 EGFRP00533 1210 aa10.82□□□□□ -0.68
SMAD1-207ENST00000507594 TCP10Q12799 353 aa10.82□□□□□ -0.68
SMAD1-207ENST00000507594 TNFAIP1Q13829 316 aa10.82□□□□□ -0.68
SMAD1-207ENST00000507594 SLC4A8Q2Y0W8 1093 aa10.82□□□□□ -0.68
SMAD1-207ENST00000507594 ANGEL2Q5VTE6 544 aaKnown RBP10.82□□□□□ -0.68
SMAD1-207ENST00000507594 CHADLQ6NUI6 762 aa10.82□□□□□ -0.68
SMAD1-207ENST00000507594 CDC42EP5Q6NZY7 148 aa10.82□□□□□ -0.68
SMAD1-207ENST00000507594 USP50Q70EL3 339 aaPredicted RBP10.82□□□□□ -0.68
SMAD1-207ENST00000507594 MAPKAPK5Q8IW41 473 aa10.82□□□□□ -0.68
SMAD1-207ENST00000507594 ZNF384Q8TF68 577 aa10.82□□□□□ -0.68
SMAD1-207ENST00000507594 TGFBRAP1Q8WUH2 860 aa10.82□□□□□ -0.68
SMAD1-207ENST00000507594 OSBP2Q969R2 916 aa10.82□□□□□ -0.68
SMAD1-207ENST00000507594 PRMT6Q96LA8 375 aaPredicted RBP10.82□□□□□ -0.68
SMAD1-207ENST00000507594 MFRPQ9BY79 579 aa10.82□□□□□ -0.68
SMAD1-207ENST00000507594 TRIM34Q9BYJ4 488 aa10.82□□□□□ -0.68
SMAD1-207ENST00000507594 NACAP1Q9BZK3 213 aa10.82□□□□□ -0.68
SMAD1-207ENST00000507594 ZNF70Q9UC06 446 aaPredicted RBP10.82□□□□□ -0.68
SMAD1-207ENST00000507594 GNAT2P19087 354 aa10.81□□□□□ -0.68
SMAD1-207ENST00000507594 APOBEC3HQ6NTF7 200 aaKnown RBP10.81□□□□□ -0.68
SMAD1-207ENST00000507594 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.81□□□□□ -0.68
SMAD1-207ENST00000507594 TICAM2Q86XR7 235 aa10.81□□□□□ -0.68
SMAD1-207ENST00000507594 APOBEC3FQ8IUX4 373 aaKnown RBP10.81□□□□□ -0.68
SMAD1-207ENST00000507594 SULF1Q8IWU6 871 aa10.81□□□□□ -0.68
SMAD1-207ENST00000507594 SDR42E1Q8WUS8 393 aa10.81□□□□□ -0.68
SMAD1-207ENST00000507594 FAM163AQ96GL9 167 aaPredicted RBP10.81□□□□□ -0.68
SMAD1-207ENST00000507594 ESYT1Q9BSJ8 1104 aa10.81□□□□□ -0.68
SMAD1-207ENST00000507594 MRIQ9BWK5 157 aa10.81□□□□□ -0.68
SMAD1-207ENST00000507594 SAP30BPQ9UHR5 308 aaKnown RBP10.81□□□□□ -0.68
SMAD1-207ENST00000507594 PCDHB8Q9UN66 801 aa10.81□□□□□ -0.68
SMAD1-207ENST00000507594 SCAF8Q9UPN6 1271 aaKnown RBP10.81□□□□□ -0.68
SMAD1-207ENST00000507594 PCDHB13Q9Y5F0 798 aa10.81□□□□□ -0.68
SMAD1-207ENST00000507594 EIF5BO60841 1220 aaKnown RBP10.8□□□□□ -0.68
SMAD1-207ENST00000507594 POLR3DP05423 398 aaPredicted RBP10.8□□□□□ -0.68
SMAD1-207ENST00000507594 ZNF589Q86UQ0 364 aaPredicted RBP10.8□□□□□ -0.68
SMAD1-207ENST00000507594 MTMR14Q8NCE2 650 aa10.8□□□□□ -0.68
SMAD1-207ENST00000507594 NAPBQ9H115 298 aa10.8□□□□□ -0.68
SMAD1-207ENST00000507594 ASTN2O75129 1339 aaPredicted RBP10.8□□□□□ -0.68
SMAD1-207ENST00000507594 MINDY4BA8MYZ0 360 aa10.79□□□□□ -0.68
SMAD1-207ENST00000507594 SGSM2O43147 1006 aa10.79□□□□□ -0.68
SMAD1-207ENST00000507594 PRKAB2O43741 272 aa10.79□□□□□ -0.68
SMAD1-207ENST00000507594 REC8O95072 547 aa10.79□□□□□ -0.68
SMAD1-207ENST00000507594 HLA-DOAP06340 250 aa10.79□□□□□ -0.68
SMAD1-207ENST00000507594 PPP4CP60510 307 aa10.79□□□□□ -0.68
SMAD1-207ENST00000507594 STRBPQ96SI9 672 aaKnown RBP10.79□□□□□ -0.68
SMAD1-207ENST00000507594 RIOK1Q9BRS2 568 aaKnown RBP10.79□□□□□ -0.68
SMAD1-207ENST00000507594 ZNF408Q9H9D4 720 aa10.79□□□□□ -0.68
SMAD1-207ENST00000507594 UPF2Q9HAU5 1272 aaKnown RBP10.79□□□□□ -0.68
SMAD1-207ENST00000507594 MCM9Q9NXL9 1143 aa10.79□□□□□ -0.68
SMAD1-207ENST00000507594 MYH1P12882 1939 aa10.79□□□□□ -0.68
SMAD1-207ENST00000507594 FLT1P17948 1338 aa10.79□□□□□ -0.68
SMAD1-207ENST00000507594 CDK5RAP2Q96SN8 1893 aa10.78□□□□□ -0.68
SMAD1-207ENST00000507594 BAZ2AQ9UIF9 1905 aaKnown RBP10.78□□□□□ -0.68
SMAD1-207ENST00000507594 MCCP23508 829 aa10.78□□□□□ -0.68
SMAD1-207ENST00000507594 NF2P35240 595 aa10.78□□□□□ -0.68
SMAD1-207ENST00000507594 HIRAP54198 1017 aaPredicted RBP10.78□□□□□ -0.68
SMAD1-207ENST00000507594 RHBDL3P58872 404 aa10.78□□□□□ -0.68
SMAD1-207ENST00000507594 NFIAQ12857 509 aa10.78□□□□□ -0.68
SMAD1-207ENST00000507594 MAP1SQ66K74 1059 aaPredicted RBP10.78□□□□□ -0.68
SMAD1-207ENST00000507594 KRT26Q7Z3Y9 468 aa10.78□□□□□ -0.68
SMAD1-207ENST00000507594 LDHDQ86WU2 507 aa10.78□□□□□ -0.68
SMAD1-207ENST00000507594 STK11IPQ8N1F8 1099 aa10.78□□□□□ -0.68
SMAD1-207ENST00000507594 CRACR2BQ8N4Y2 399 aaPredicted RBP10.78□□□□□ -0.68
SMAD1-207ENST00000507594 FOCADQ5VW36 1801 aa10.77□□□□□ -0.68
SMAD1-207ENST00000507594 POTECB2RU33 542 aa10.77□□□□□ -0.69
SMAD1-207ENST00000507594 PATL2C9JE40 543 aaKnown RBP10.77□□□□□ -0.69
SMAD1-207ENST00000507594 ADM5C9JUS6 153 aa10.77□□□□□ -0.69
SMAD1-207ENST00000507594 WDHD1O75717 1129 aaPredicted RBP10.77□□□□□ -0.69
SMAD1-207ENST00000507594 SLC3A2P08195 630 aaKnown RBP10.77□□□□□ -0.69
SMAD1-207ENST00000507594 POTEIP0CG38 1075 aa10.77□□□□□ -0.69
SMAD1-207ENST00000507594 POTEJP0CG39 1038 aa10.77□□□□□ -0.69
SMAD1-207ENST00000507594 HSPD1P10809 573 aaKnown RBP10.77□□□□□ -0.69
SMAD1-207ENST00000507594 TTLL12Q14166 644 aaPredicted RBP10.77□□□□□ -0.69
SMAD1-207ENST00000507594 RASA3Q14644 834 aa10.77□□□□□ -0.69
SMAD1-207ENST00000507594 VPS53Q5VIR6 699 aa10.77□□□□□ -0.69
SMAD1-207ENST00000507594 USP48Q86UV5 1035 aa10.77□□□□□ -0.69
SMAD1-207ENST00000507594 ZC3H15Q8WU90 426 aaKnown RBP10.77□□□□□ -0.69
SMAD1-207ENST00000507594 ZBED3Q96IU2 234 aaPredicted RBP10.77□□□□□ -0.69
SMAD1-207ENST00000507594 CSRNP1Q96S65 589 aa10.77□□□□□ -0.69
SMAD1-207ENST00000507594 TMEM39BQ9GZU3 492 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 130.1 ms