RNA–Protein interactions for RNA: ENST00000507485.1

RPS3A-206, Transcript of ribosomal protein S3A, humanhuman

TSL 1 (best)

Gene RPS3A, Length 1,526 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3A-206ENST00000507485 UBE4AQ14139 1066 aa11.38□□□□□ -0.59
RPS3A-206ENST00000507485 PKN2Q16513 984 aaKnown RBP11.38□□□□□ -0.59
RPS3A-206ENST00000507485 RABL6Q3YEC7 729 aaPredicted RBP11.38□□□□□ -0.59
RPS3A-206ENST00000507485 TAF7LQ5H9L4 462 aa11.38□□□□□ -0.59
RPS3A-206ENST00000507485 VGLL2Q8N8G2 317 aa11.38□□□□□ -0.59
RPS3A-206ENST00000507485 TTF2Q9UNY4 1162 aaKnown RBP11.38□□□□□ -0.59
RPS3A-206ENST00000507485 PPP1R12BO60237 982 aaPredicted RBP11.37□□□□□ -0.59
RPS3A-206ENST00000507485 HIBADHP31937 336 aaKnown RBP11.37□□□□□ -0.59
RPS3A-206ENST00000507485 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.37□□□□□ -0.59
RPS3A-206ENST00000507485 OTOP1Q7RTM1 612 aa11.37□□□□□ -0.59
RPS3A-206ENST00000507485 FBXO33Q7Z6M2 555 aa11.37□□□□□ -0.59
RPS3A-206ENST00000507485 DZIP1LQ8IYY4 767 aaKnown RBP11.37□□□□□ -0.59
RPS3A-206ENST00000507485 TMEM39BQ9GZU3 492 aa11.37□□□□□ -0.59
RPS3A-206ENST00000507485 ELP3Q9H9T3 547 aa11.37□□□□□ -0.59
RPS3A-206ENST00000507485 TCP10L2B9ZVM9 353 aa11.36□□□□□ -0.59
RPS3A-206ENST00000507485 CRKP46108 304 aa11.36□□□□□ -0.59
RPS3A-206ENST00000507485 CACNB3P54284 484 aa11.36□□□□□ -0.59
RPS3A-206ENST00000507485 CRHR2Q13324 411 aa11.36□□□□□ -0.59
RPS3A-206ENST00000507485 SUPT20HL1Q3ZLR7 823 aa11.36□□□□□ -0.59
RPS3A-206ENST00000507485 SERPINA10Q9UK55 444 aa11.36□□□□□ -0.59
RPS3A-206ENST00000507485 ZSWIM8A7E2V4 1837 aa11.36□□□□□ -0.59
RPS3A-206ENST00000507485 TESPA1A2RU30 521 aaPredicted RBP11.35□□□□□ -0.59
RPS3A-206ENST00000507485 MYO1BO43795 1136 aa11.35□□□□□ -0.59
RPS3A-206ENST00000507485 CD99L2Q8TCZ2 262 aa11.35□□□□□ -0.59
RPS3A-206ENST00000507485 TRIM17Q9Y577 477 aa11.35□□□□□ -0.59
RPS3A-206ENST00000507485 ALDH1A1P00352 501 aa11.35□□□□□ -0.59
RPS3A-206ENST00000507485 IREB2P48200 963 aaKnown RBP11.35□□□□□ -0.59
RPS3A-206ENST00000507485 INHBEP58166 350 aa11.35□□□□□ -0.59
RPS3A-206ENST00000507485 CHAF1AQ13111 956 aaPredicted RBP11.35□□□□□ -0.59
RPS3A-206ENST00000507485 ANKRD13AQ8IZ07 590 aa11.35□□□□□ -0.59
RPS3A-206ENST00000507485 BRI3BPQ8WY22 251 aa11.35□□□□□ -0.59
RPS3A-206ENST00000507485 SSH1Q8WYL5 1049 aa11.35□□□□□ -0.59
RPS3A-206ENST00000507485 OPTNQ96CV9 577 aa11.35□□□□□ -0.59
RPS3A-206ENST00000507485 USP44Q9H0E7 712 aa11.35□□□□□ -0.59
RPS3A-206ENST00000507485 MROH5Q6ZUA9 1318 aa11.34□□□□□ -0.59
RPS3A-206ENST00000507485 UNCXA6NJT0 531 aa11.34□□□□□ -0.59
RPS3A-206ENST00000507485 FGFR2P21802 821 aa11.34□□□□□ -0.59
RPS3A-206ENST00000507485 RFX5P48382 616 aaPredicted RBP11.34□□□□□ -0.59
RPS3A-206ENST00000507485 VGLL4Q14135 290 aa11.34□□□□□ -0.59
RPS3A-206ENST00000507485 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.34□□□□□ -0.59
RPS3A-206ENST00000507485 PDE8BO95263 885 aa11.33□□□□□ -0.6
RPS3A-206ENST00000507485 CAMK2BQ13554 666 aa11.33□□□□□ -0.6
RPS3A-206ENST00000507485 METTL24Q5JXM2 366 aa11.33□□□□□ -0.6
RPS3A-206ENST00000507485 PRPF38BQ5VTL8 546 aaKnown RBP11.33□□□□□ -0.6
RPS3A-206ENST00000507485 TRAF7Q6Q0C0 670 aa11.33□□□□□ -0.6
RPS3A-206ENST00000507485 PACS2Q86VP3 889 aa11.33□□□□□ -0.6
RPS3A-206ENST00000507485 FAM43AQ8N2R8 423 aa11.33□□□□□ -0.6
RPS3A-206ENST00000507485 PTPN22Q9Y2R2 807 aa11.33□□□□□ -0.6
RPS3A-206ENST00000507485 SNCAIPQ9Y6H5 919 aa11.33□□□□□ -0.6
RPS3A-206ENST00000507485 RBBP6Q7Z6E9 1792 aaKnown RBP11.33□□□□□ -0.6
RPS3A-206ENST00000507485 DPYSL4O14531 572 aa11.32□□□□□ -0.6
RPS3A-206ENST00000507485 TNFAIP1Q13829 316 aa11.32□□□□□ -0.6
RPS3A-206ENST00000507485 APOBEC3HQ6NTF7 200 aaKnown RBP11.32□□□□□ -0.6
RPS3A-206ENST00000507485 CDCA7LQ96GN5 454 aa11.32□□□□□ -0.6
RPS3A-206ENST00000507485 GFRA3O60609 400 aa11.31□□□□□ -0.6
RPS3A-206ENST00000507485 ATG9AQ7Z3C6 839 aa11.31□□□□□ -0.6
RPS3A-206ENST00000507485 CENPFP49454 3210 aa11.3□□□□□ -0.6
RPS3A-206ENST00000507485 CCL15-CCL14A0A0B4J2E2 113 aa11.3□□□□□ -0.6
RPS3A-206ENST00000507485 HDLBPQ00341 1268 aaKnown RBP11.3□□□□□ -0.6
RPS3A-206ENST00000507485 SP3Q02447 781 aa11.3□□□□□ -0.6
RPS3A-206ENST00000507485 SLFN5Q08AF3 891 aa11.3□□□□□ -0.6
RPS3A-206ENST00000507485 CCL15Q16663 113 aa11.3□□□□□ -0.6
RPS3A-206ENST00000507485 ZKSCAN4Q969J2 545 aaPredicted RBP11.3□□□□□ -0.6
RPS3A-206ENST00000507485 ERO1AQ96HE7 468 aa11.3□□□□□ -0.6
RPS3A-206ENST00000507485 ZDHHC15Q96MV8 337 aa11.3□□□□□ -0.6
RPS3A-206ENST00000507485 MYH13Q9UKX3 1938 aa11.3□□□□□ -0.6
RPS3A-206ENST00000507485 MKI67P46013 3256 aaKnown RBP11.3□□□□□ -0.6
RPS3A-206ENST00000507485 KIAA0100Q14667 2235 aaKnown RBP11.3□□□□□ -0.6
RPS3A-206ENST00000507485 PTPRCP08575 1304 aa11.3□□□□□ -0.6
RPS3A-206ENST00000507485 SPDYE5A6NIY4 337 aa11.3□□□□□ -0.6
RPS3A-206ENST00000507485 PPP4CP60510 307 aa11.3□□□□□ -0.6
RPS3A-206ENST00000507485 VPS37DQ86XT2 251 aa11.3□□□□□ -0.6
RPS3A-206ENST00000507485 TEKT1Q969V4 418 aa11.3□□□□□ -0.6
RPS3A-206ENST00000507485 ARMC5Q96C12 935 aa11.3□□□□□ -0.6
RPS3A-206ENST00000507485 ARHGAP39Q9C0H5 1083 aa11.3□□□□□ -0.6
RPS3A-206ENST00000507485 EFCC1Q9HA90 598 aa11.3□□□□□ -0.6
RPS3A-206ENST00000507485 BRCA2P51587 3418 aa11.29□□□□□ -0.6
RPS3A-206ENST00000507485 EYA2O00167 538 aa11.29□□□□□ -0.6
RPS3A-206ENST00000507485 EN2P19622 333 aaPredicted RBP11.29□□□□□ -0.6
RPS3A-206ENST00000507485 PUM3Q15397 648 aaKnown RBP11.29□□□□□ -0.6
RPS3A-206ENST00000507485 TAF1CQ15572 869 aaPredicted RBP11.29□□□□□ -0.6
RPS3A-206ENST00000507485 DIXDC1Q155Q3 683 aa11.29□□□□□ -0.6
RPS3A-206ENST00000507485 CAVIN4Q5BKX8 364 aa11.29□□□□□ -0.6
RPS3A-206ENST00000507485 TBC1D22AQ8WUA7 517 aa11.29□□□□□ -0.6
RPS3A-206ENST00000507485 DDX12PQ92771 950 aa11.29□□□□□ -0.6
RPS3A-206ENST00000507485 MRIQ9BWK5 157 aa11.29□□□□□ -0.6
RPS3A-206ENST00000507485 PTCH2Q9Y6C5 1203 aa11.29□□□□□ -0.6
RPS3A-206ENST00000507485 KIF16BQ96L93 1317 aa11.28□□□□□ -0.6
RPS3A-206ENST00000507485 BTBD19C9JJ37 291 aa11.28□□□□□ -0.6
RPS3A-206ENST00000507485 E9PSI1 815 aa11.28□□□□□ -0.6
RPS3A-206ENST00000507485 IRF6O14896 467 aa11.28□□□□□ -0.6
RPS3A-206ENST00000507485 FRAT2O75474 233 aaPredicted RBP11.28□□□□□ -0.6
RPS3A-206ENST00000507485 CTGFP29279 349 aa11.28□□□□□ -0.6
RPS3A-206ENST00000507485 PRDX5P30044 214 aa11.28□□□□□ -0.6
RPS3A-206ENST00000507485 INPP5BP32019 993 aa11.28□□□□□ -0.6
RPS3A-206ENST00000507485 TNNI2P48788 182 aa11.28□□□□□ -0.6
RPS3A-206ENST00000507485 GTF2A2P52657 109 aa11.28□□□□□ -0.6
RPS3A-206ENST00000507485 NFIAQ12857 509 aa11.28□□□□□ -0.6
RPS3A-206ENST00000507485 OTUD7BQ6GQQ9 843 aa11.28□□□□□ -0.6
RPS3A-206ENST00000507485 WRNIP1Q96S55 665 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms