RNA–Protein interactions for RNA: ENST00000506409.1

MED28-204, Transcript of mediator complex subunit 28, humanhuman

TSL 2

Gene MED28, Length 347 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED28-204ENST00000506409 BAG3O95817 575 aa18.94■□□□□ 0.62
MED28-204ENST00000506409 TEX11Q8IYF3 940 aa18.94■□□□□ 0.62
MED28-204ENST00000506409 CNKSR2Q8WXI2 1034 aa18.94■□□□□ 0.62
MED28-204ENST00000506409 OTUD5Q96G74 571 aa18.94■□□□□ 0.62
MED28-204ENST00000506409 ANTXR1Q9H6X2 564 aa18.94■□□□□ 0.62
MED28-204ENST00000506409 AATFQ9NY61 560 aaKnown RBP eCLIP18.94■□□□□ 0.62
MED28-204ENST00000506409 SNCAIPQ9Y6H5 919 aa18.94■□□□□ 0.62
MED28-204ENST00000506409 MYO5AQ9Y4I1 1855 aaKnown RBP18.93■□□□□ 0.62
MED28-204ENST00000506409 SPDYE5A6NIY4 337 aa18.93■□□□□ 0.62
MED28-204ENST00000506409 NPM3O75607 178 aaKnown RBP18.93■□□□□ 0.62
MED28-204ENST00000506409 PLCG2P16885 1265 aa18.93■□□□□ 0.62
MED28-204ENST00000506409 SH3BP5LQ7L8J4 393 aa18.93■□□□□ 0.62
MED28-204ENST00000506409 ADGRA1Q86SQ6 560 aa18.93■□□□□ 0.62
MED28-204ENST00000506409 SH3RF3Q8TEJ3 882 aaPredicted RBP18.93■□□□□ 0.62
MED28-204ENST00000506409 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.93■□□□□ 0.62
MED28-204ENST00000506409 CRBNQ96SW2 442 aa18.93■□□□□ 0.62
MED28-204ENST00000506409 DCTPP1Q9H773 170 aa18.93■□□□□ 0.62
MED28-204ENST00000506409 DOCK2Q92608 1830 aa18.93■□□□□ 0.62
MED28-204ENST00000506409 ATRNL1Q5VV63 1379 aa18.93■□□□□ 0.62
MED28-204ENST00000506409 CASP8AP2Q9UKL3 1982 aa18.92■□□□□ 0.62
MED28-204ENST00000506409 DDTLA6NHG4 134 aaPredicted RBP18.92■□□□□ 0.62
MED28-204ENST00000506409 SMARCA5O60264 1052 aaPredicted RBP18.92■□□□□ 0.62
MED28-204ENST00000506409 ALDH1A1P00352 501 aa18.92■□□□□ 0.62
MED28-204ENST00000506409 CYP7A1P22680 504 aa18.92■□□□□ 0.62
MED28-204ENST00000506409 INPP5BP32019 993 aa18.92■□□□□ 0.62
MED28-204ENST00000506409 PPP4CP60510 307 aa18.92■□□□□ 0.62
MED28-204ENST00000506409 MAP3K12Q12852 859 aa18.92■□□□□ 0.62
MED28-204ENST00000506409 TTF1Q15361 905 aaPredicted RBP18.92■□□□□ 0.62
MED28-204ENST00000506409 ERO1BQ86YB8 467 aa18.92■□□□□ 0.62
MED28-204ENST00000506409 IFNL1Q8IU54 200 aa18.92■□□□□ 0.62
MED28-204ENST00000506409 MAGEB6Q8N7X4 407 aa18.92■□□□□ 0.62
MED28-204ENST00000506409 DNAJC2Q99543 621 aaKnown RBP18.92■□□□□ 0.62
MED28-204ENST00000506409 ZNF112Q9UJU3 913 aa18.92■□□□□ 0.62
MED28-204ENST00000506409 PCDHB15Q9Y5E8 787 aa18.92■□□□□ 0.62
MED28-204ENST00000506409 LAMB1P07942 1786 aa18.91■□□□□ 0.62
MED28-204ENST00000506409 TBC1D8O95759 1140 aa18.91■□□□□ 0.62
MED28-204ENST00000506409 OSBPL5Q9H0X9 879 aaPredicted RBP18.91■□□□□ 0.62
MED28-204ENST00000506409 IGF2BP3O00425 579 aaKnown RBP eCLIP18.9■□□□□ 0.62
MED28-204ENST00000506409 GOLIM4O00461 696 aa18.9■□□□□ 0.62
MED28-204ENST00000506409 GTF2A2P52657 109 aa18.9■□□□□ 0.62
MED28-204ENST00000506409 OTUD7BQ6GQQ9 843 aa18.9■□□□□ 0.62
MED28-204ENST00000506409 TMED8Q6PL24 325 aaPredicted RBP18.9■□□□□ 0.62
MED28-204ENST00000506409 MS4A4AQ96JQ5 239 aa18.9■□□□□ 0.62
MED28-204ENST00000506409 COL2A1P02458 1487 aaPredicted RBP18.9■□□□□ 0.62
MED28-204ENST00000506409 TESPA1A2RU30 521 aaPredicted RBP18.89■□□□□ 0.61
MED28-204ENST00000506409 ATP5JP18859 108 aa18.89■□□□□ 0.61
MED28-204ENST00000506409 MIGA1Q8NAN2 632 aa18.89■□□□□ 0.61
MED28-204ENST00000506409 BOLA2Q9H3K6 86 aa18.89■□□□□ 0.61
MED28-204ENST00000506409 CCL15-CCL14A0A0B4J2E2 113 aa18.88■□□□□ 0.61
MED28-204ENST00000506409 PHF20L1A8MW92 1017 aa18.88■□□□□ 0.61
MED28-204ENST00000506409 IRF6O14896 467 aa18.88■□□□□ 0.61
MED28-204ENST00000506409 DYNLL1P63167 89 aaKnown RBP18.88■□□□□ 0.61
MED28-204ENST00000506409 MAP3K10Q02779 954 aa18.88■□□□□ 0.61
MED28-204ENST00000506409 PPATQ06203 517 aa18.88■□□□□ 0.61
MED28-204ENST00000506409 PPIL2Q13356 520 aa18.88■□□□□ 0.61
MED28-204ENST00000506409 CCL15Q16663 113 aa18.88■□□□□ 0.61
MED28-204ENST00000506409 NOL9Q5SY16 702 aaKnown RBP18.88■□□□□ 0.61
MED28-204ENST00000506409 CERS3Q8IU89 383 aa18.88■□□□□ 0.61
MED28-204ENST00000506409 TGFBRAP1Q8WUH2 860 aa18.88■□□□□ 0.61
MED28-204ENST00000506409 CFHR5Q9BXR6 569 aa18.88■□□□□ 0.61
MED28-204ENST00000506409 SLURP2P0DP57 97 aa18.87■□□□□ 0.61
MED28-204ENST00000506409 FLT1P17948 1338 aa18.87■□□□□ 0.61
MED28-204ENST00000506409 SLC9C2Q5TAH2 1124 aa18.87■□□□□ 0.61
MED28-204ENST00000506409 MAPKAPK5Q8IW41 473 aa18.87■□□□□ 0.61
MED28-204ENST00000506409 BRI3BPQ8WY22 251 aa18.87■□□□□ 0.61
MED28-204ENST00000506409 EDC3Q96F86 508 aaKnown RBP18.87■□□□□ 0.61
MED28-204ENST00000506409 PTPN18Q99952 460 aa18.87■□□□□ 0.61
MED28-204ENST00000506409 PAG1Q9NWQ8 432 aa18.87■□□□□ 0.61
MED28-204ENST00000506409 GPR25O00155 361 aa18.86■□□□□ 0.61
MED28-204ENST00000506409 TBC1D12O60347 775 aa18.86■□□□□ 0.61
MED28-204ENST00000506409 CETPP11597 493 aa18.86■□□□□ 0.61
MED28-204ENST00000506409 PDE6AP16499 860 aa18.86■□□□□ 0.61
MED28-204ENST00000506409 SNAPC2Q13487 334 aa18.86■□□□□ 0.61
MED28-204ENST00000506409 NOM1Q5C9Z4 860 aaKnown RBP18.86■□□□□ 0.61
MED28-204ENST00000506409 SCYL3Q8IZE3 742 aa18.86■□□□□ 0.61
MED28-204ENST00000506409 HAUS7Q99871 368 aa18.86■□□□□ 0.61
MED28-204ENST00000506409 DHX36Q9H2U1 1008 aaKnown RBP18.86■□□□□ 0.61
MED28-204ENST00000506409 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.86■□□□□ 0.61
MED28-204ENST00000506409 FAM196BA6NMK8 535 aa18.85■□□□□ 0.61
MED28-204ENST00000506409 ZNF296Q8WUU4 475 aaPredicted RBP18.85■□□□□ 0.61
MED28-204ENST00000506409 GPATCH3Q96I76 525 aa18.85■□□□□ 0.61
MED28-204ENST00000506409 R3HDMLQ9H3Y0 253 aa18.85■□□□□ 0.61
MED28-204ENST00000506409 PICK1Q9NRD5 415 aa18.85■□□□□ 0.61
MED28-204ENST00000506409 ECHDC1Q9NTX5 307 aa18.85■□□□□ 0.61
MED28-204ENST00000506409 PI4KBQ9UBF8 816 aa18.85■□□□□ 0.61
MED28-204ENST00000506409 CDK5RAP2Q96SN8 1893 aa18.84■□□□□ 0.61
MED28-204ENST00000506409 CTNND1O60716 968 aaKnown RBP18.84■□□□□ 0.61
MED28-204ENST00000506409 CAPN15O75808 1086 aa18.84■□□□□ 0.61
MED28-204ENST00000506409 DGKZQ13574 1117 aa18.84■□□□□ 0.61
MED28-204ENST00000506409 MCOLN1Q9GZU1 580 aa18.84■□□□□ 0.61
MED28-204ENST00000506409 HERC5Q9UII4 1024 aaKnown RBP18.84■□□□□ 0.61
MED28-204ENST00000506409 FOCADQ5VW36 1801 aa18.84■□□□□ 0.61
MED28-204ENST00000506409 ZNF532Q9HCE3 1301 aa18.83■□□□□ 0.61
MED28-204ENST00000506409 MAGEB6P1A0A0J9YX57 407 aa18.83■□□□□ 0.6
MED28-204ENST00000506409 USP5P45974 858 aa18.83■□□□□ 0.6
MED28-204ENST00000506409 CRHR2Q13324 411 aa18.83■□□□□ 0.6
MED28-204ENST00000506409 AAMPQ13685 434 aa18.83■□□□□ 0.6
MED28-204ENST00000506409 RIOK1Q9BRS2 568 aaKnown RBP18.83■□□□□ 0.6
MED28-204ENST00000506409 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.83■□□□□ 0.6
MED28-204ENST00000506409 SAP30BPQ9UHR5 308 aaKnown RBP18.83■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms