RNA–Protein interactions for RNA: ENST00000505732.5

TTC39B-204, Transcript of tetratricopeptide repeat domain 39B, humanhuman

TSL 1 (best)

Gene TTC39B, Length 1,881 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39B-204ENST00000505732 PROM2Q8N271 834 aa24.41■■□□□ 1.5
TTC39B-204ENST00000505732 PHKBQ93100 1093 aa24.41■■□□□ 1.5
TTC39B-204ENST00000505732 ERICH2A1L162 156 aa24.4■■□□□ 1.5
TTC39B-204ENST00000505732 AIFM3Q96NN9 605 aa24.4■■□□□ 1.5
TTC39B-204ENST00000505732 AATFQ9NY61 560 aaKnown RBP eCLIP24.4■■□□□ 1.5
TTC39B-204ENST00000505732 CHD4Q14839 1912 aa24.39■■□□□ 1.5
TTC39B-204ENST00000505732 CYP2D7A0A087X1C5 515 aa24.39■■□□□ 1.5
TTC39B-204ENST00000505732 CAMK4Q16566 473 aa24.39■■□□□ 1.5
TTC39B-204ENST00000505732 TXNRD1Q16881 649 aa24.39■■□□□ 1.5
TTC39B-204ENST00000505732 PDLIM2Q96JY6 352 aa24.39■■□□□ 1.5
TTC39B-204ENST00000505732 ALG1Q9BT22 464 aa24.39■■□□□ 1.5
TTC39B-204ENST00000505732 NR1I2O75469 434 aa24.38■■□□□ 1.49
TTC39B-204ENST00000505732 POLR3DP05423 398 aaPredicted RBP24.38■■□□□ 1.49
TTC39B-204ENST00000505732 CTR9Q6PD62 1173 aa24.38■■□□□ 1.49
TTC39B-204ENST00000505732 TMTC2Q8N394 836 aa24.38■■□□□ 1.49
TTC39B-204ENST00000505732 RGS22Q8NE09 1264 aa24.38■■□□□ 1.49
TTC39B-204ENST00000505732 ESR2Q92731 530 aa24.38■■□□□ 1.49
TTC39B-204ENST00000505732 RRAGDQ9NQL2 400 aaPredicted RBP24.38■■□□□ 1.49
TTC39B-204ENST00000505732 DDX19AQ9NUU7 478 aaKnown RBP24.38■■□□□ 1.49
TTC39B-204ENST00000505732 RANBP6O60518 1105 aaKnown RBP24.38■■□□□ 1.49
TTC39B-204ENST00000505732 IARSP41252 1262 aaKnown RBP24.38■■□□□ 1.49
TTC39B-204ENST00000505732 SPTY2D1Q68D10 685 aaPredicted RBP24.38■■□□□ 1.49
TTC39B-204ENST00000505732 RBM17Q96I25 401 aaKnown RBP24.38■■□□□ 1.49
TTC39B-204ENST00000505732 GPSM2P81274 684 aa24.37■■□□□ 1.49
TTC39B-204ENST00000505732 DDR1Q08345 913 aa24.37■■□□□ 1.49
TTC39B-204ENST00000505732 MAP3K11Q16584 847 aa24.37■■□□□ 1.49
TTC39B-204ENST00000505732 BRAPQ7Z569 592 aa24.37■■□□□ 1.49
TTC39B-204ENST00000505732 TDRD7Q8NHU6 1098 aaKnown RBP24.37■■□□□ 1.49
TTC39B-204ENST00000505732 UBAC1Q9BSL1 405 aa24.37■■□□□ 1.49
TTC39B-204ENST00000505732 TNMDQ9H2S6 317 aa24.37■■□□□ 1.49
TTC39B-204ENST00000505732 BRWD3Q6RI45 1802 aa24.37■■□□□ 1.49
TTC39B-204ENST00000505732 USP17L12C9JPN9 530 aa24.36■■□□□ 1.49
TTC39B-204ENST00000505732 USP17L21D6R901 530 aa24.36■■□□□ 1.49
TTC39B-204ENST00000505732 KIF23Q02241 960 aaPredicted RBP24.36■■□□□ 1.49
TTC39B-204ENST00000505732 TMED8Q6PL24 325 aaPredicted RBP24.36■■□□□ 1.49
TTC39B-204ENST00000505732 GPR101Q96P66 508 aaPredicted RBP24.36■■□□□ 1.49
TTC39B-204ENST00000505732 CRNKL1Q9BZJ0 848 aaKnown RBP24.36■■□□□ 1.49
TTC39B-204ENST00000505732 RTEL1Q9NZ71 1219 aa24.36■■□□□ 1.49
TTC39B-204ENST00000505732 KIF28PB7ZC32 967 aa24.36■■□□□ 1.49
TTC39B-204ENST00000505732 POLRMTO00411 1230 aaKnown RBP24.36■■□□□ 1.49
TTC39B-204ENST00000505732 UVSSAQ2YD98 709 aa24.36■■□□□ 1.49
TTC39B-204ENST00000505732 DZIP1Q86YF9 867 aaKnown RBP24.36■■□□□ 1.49
TTC39B-204ENST00000505732 WDR66Q8TBY9 1149 aa24.36■■□□□ 1.49
TTC39B-204ENST00000505732 CLSTN2Q9H4D0 955 aa24.36■■□□□ 1.49
TTC39B-204ENST00000505732 NID2Q14112 1375 aa24.35■■□□□ 1.49
TTC39B-204ENST00000505732 C15orf52Q6ZUT6 534 aaKnown RBP24.35■■□□□ 1.49
TTC39B-204ENST00000505732 ZNF804AQ7Z570 1209 aa24.35■■□□□ 1.49
TTC39B-204ENST00000505732 DCP1AQ9NPI6 582 aaPredicted RBP24.35■■□□□ 1.49
TTC39B-204ENST00000505732 FGRP09769 529 aa24.34■■□□□ 1.49
TTC39B-204ENST00000505732 CCDC192P0DO97 292 aa24.34■■□□□ 1.49
TTC39B-204ENST00000505732 SSRP1Q08945 709 aaKnown RBP24.34■■□□□ 1.49
TTC39B-204ENST00000505732 SEC23AQ15436 765 aa24.34■■□□□ 1.49
TTC39B-204ENST00000505732 MYSM1Q5VVJ2 828 aa24.34■■□□□ 1.49
TTC39B-204ENST00000505732 KRT40Q6A162 431 aa24.34■■□□□ 1.49
TTC39B-204ENST00000505732 SLC26A6Q9BXS9 759 aa24.34■■□□□ 1.49
TTC39B-204ENST00000505732 ATP8A2Q9NTI2 1148 aa24.34■■□□□ 1.49
TTC39B-204ENST00000505732 MYH13Q9UKX3 1938 aa24.34■■□□□ 1.49
TTC39B-204ENST00000505732 MYH15Q9Y2K3 1946 aa24.34■■□□□ 1.49
TTC39B-204ENST00000505732 IFNAR1P17181 557 aa24.34■■□□□ 1.49
TTC39B-204ENST00000505732 RTN1Q16799 776 aa24.34■■□□□ 1.49
TTC39B-204ENST00000505732 CCAR1Q8IX12 1150 aaKnown RBP24.34■■□□□ 1.49
TTC39B-204ENST00000505732 TNKSO95271 1327 aa24.33■■□□□ 1.49
TTC39B-204ENST00000505732 PRDM1O75626 825 aa24.33■■□□□ 1.49
TTC39B-204ENST00000505732 BBOX1O75936 387 aa24.33■■□□□ 1.49
TTC39B-204ENST00000505732 FMNL1O95466 1100 aaPredicted RBP24.33■■□□□ 1.49
TTC39B-204ENST00000505732 LDHBP07195 334 aaKnown RBP24.33■■□□□ 1.49
TTC39B-204ENST00000505732 PCP11498 1178 aaKnown RBP24.33■■□□□ 1.49
TTC39B-204ENST00000505732 ME1P48163 572 aa24.33■■□□□ 1.49
TTC39B-204ENST00000505732 CKAP2LQ8IYA6 745 aa24.33■■□□□ 1.49
TTC39B-204ENST00000505732 ZNF654Q8IZM8 581 aa24.33■■□□□ 1.49
TTC39B-204ENST00000505732 TAOK2Q9UL54 1235 aa24.33■■□□□ 1.49
TTC39B-204ENST00000505732 CLIC4Q9Y696 253 aa24.33■■□□□ 1.49
TTC39B-204ENST00000505732 STK36Q9NRP7 1315 aa24.33■■□□□ 1.49
TTC39B-204ENST00000505732 UBE2Q2LH0YL09 131 aa24.32■■□□□ 1.48
TTC39B-204ENST00000505732 UFL1O94874 794 aa24.32■■□□□ 1.48
TTC39B-204ENST00000505732 ATP2B4P23634 1241 aa24.32■■□□□ 1.48
TTC39B-204ENST00000505732 RCAN1P53805 252 aa24.32■■□□□ 1.48
TTC39B-204ENST00000505732 RBM43Q6ZSC3 357 aaKnown RBP24.32■■□□□ 1.48
TTC39B-204ENST00000505732 LINC00301Q8NCQ3 95 aa24.32■■□□□ 1.48
TTC39B-204ENST00000505732 POLR3EQ9NVU0 708 aa24.32■■□□□ 1.48
TTC39B-204ENST00000505732 ESPNB1AK53 854 aa24.32■■□□□ 1.48
TTC39B-204ENST00000505732 HOXA10P31260 410 aaPredicted RBP24.32■■□□□ 1.48
TTC39B-204ENST00000505732 EVX2Q03828 476 aa24.32■■□□□ 1.48
TTC39B-204ENST00000505732 FANCBQ8NB91 859 aa24.32■■□□□ 1.48
TTC39B-204ENST00000505732 NUP133Q8WUM0 1156 aa24.32■■□□□ 1.48
TTC39B-204ENST00000505732 ZSCAN10Q96SZ4 725 aaPredicted RBP24.32■■□□□ 1.48
TTC39B-204ENST00000505732 PCDHA7Q9UN72 937 aa24.32■■□□□ 1.48
TTC39B-204ENST00000505732 HMGB2P26583 209 aaKnown RBP24.31■■□□□ 1.48
TTC39B-204ENST00000505732 ENAHQ8N8S7 591 aaPredicted RBP24.31■■□□□ 1.48
TTC39B-204ENST00000505732 GOLPH3LQ9H4A5 285 aa24.31■■□□□ 1.48
TTC39B-204ENST00000505732 GGA1Q9UJY5 639 aa24.31■■□□□ 1.48
TTC39B-204ENST00000505732 BAZ2AQ9UIF9 1905 aaKnown RBP24.31■■□□□ 1.48
TTC39B-204ENST00000505732 CCDC196A0A1B0GTZ2 297 aa24.3■■□□□ 1.48
TTC39B-204ENST00000505732 IGSF3O75054 1194 aa24.3■■□□□ 1.48
TTC39B-204ENST00000505732 RBM6P78332 1123 aaKnown RBP24.3■■□□□ 1.48
TTC39B-204ENST00000505732 TRIM29Q14134 588 aa24.3■■□□□ 1.48
TTC39B-204ENST00000505732 STK38Q15208 465 aa24.3■■□□□ 1.48
TTC39B-204ENST00000505732 GRIK5Q16478 980 aa24.3■■□□□ 1.48
TTC39B-204ENST00000505732 KLRG2A4D1S0 409 aaPredicted RBP24.3■■□□□ 1.48
TTC39B-204ENST00000505732 YEATS4O95619 227 aa24.3■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms