RNA–Protein interactions for RNA: ENST00000505676.5

TRAPPC11-204, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best)

Gene TRAPPC11, Length 2,244 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-204ENST00000505676 CCDC88AQ3V6T2 1871 aa20.12■□□□□ 0.81
TRAPPC11-204ENST00000505676 IFNAR1P17181 557 aa20.12■□□□□ 0.81
TRAPPC11-204ENST00000505676 IARSP41252 1262 aaKnown RBP20.12■□□□□ 0.81
TRAPPC11-204ENST00000505676 SBK1Q52WX2 424 aa20.12■□□□□ 0.81
TRAPPC11-204ENST00000505676 TDRD7Q8NHU6 1098 aaKnown RBP20.12■□□□□ 0.81
TRAPPC11-204ENST00000505676 BICD2Q8TD16 824 aa20.12■□□□□ 0.81
TRAPPC11-204ENST00000505676 KLRG2A4D1S0 409 aaPredicted RBP20.11■□□□□ 0.81
TRAPPC11-204ENST00000505676 DTNBO60941 627 aa20.11■□□□□ 0.81
TRAPPC11-204ENST00000505676 CAVIN2O95810 425 aa20.11■□□□□ 0.81
TRAPPC11-204ENST00000505676 TRIM29Q14134 588 aa20.11■□□□□ 0.81
TRAPPC11-204ENST00000505676 RBM43Q6ZSC3 357 aaKnown RBP20.11■□□□□ 0.81
TRAPPC11-204ENST00000505676 FLAD1Q8NFF5 587 aa20.11■□□□□ 0.81
TRAPPC11-204ENST00000505676 KCNG4Q8TDN1 519 aa20.11■□□□□ 0.81
TRAPPC11-204ENST00000505676 FUCA2Q9BTY2 467 aa20.11■□□□□ 0.81
TRAPPC11-204ENST00000505676 POLR3EQ9NVU0 708 aa20.11■□□□□ 0.81
TRAPPC11-204ENST00000505676 CLSTN2Q9H4D0 955 aa20.11■□□□□ 0.81
TRAPPC11-204ENST00000505676 PODXL2Q9NZ53 605 aa20.11■□□□□ 0.81
TRAPPC11-204ENST00000505676 BRWD3Q6RI45 1802 aa20.11■□□□□ 0.81
TRAPPC11-204ENST00000505676 PLSCR1O15162 318 aa20.1■□□□□ 0.81
TRAPPC11-204ENST00000505676 ORC4O43929 436 aa20.1■□□□□ 0.81
TRAPPC11-204ENST00000505676 LDHCP07864 332 aa20.1■□□□□ 0.81
TRAPPC11-204ENST00000505676 RBM6P78332 1123 aaKnown RBP20.1■□□□□ 0.81
TRAPPC11-204ENST00000505676 SSRP1Q08945 709 aaKnown RBP20.1■□□□□ 0.81
TRAPPC11-204ENST00000505676 MICU3Q86XE3 530 aa20.1■□□□□ 0.81
TRAPPC11-204ENST00000505676 DZIP1Q86YF9 867 aaKnown RBP20.1■□□□□ 0.81
TRAPPC11-204ENST00000505676 TRIM22Q8IYM9 498 aa20.1■□□□□ 0.81
TRAPPC11-204ENST00000505676 ALG1Q9BT22 464 aa20.1■□□□□ 0.81
TRAPPC11-204ENST00000505676 TOMM22Q9NS69 142 aa20.1■□□□□ 0.81
TRAPPC11-204ENST00000505676 TFCP2L1Q9NZI6 479 aa20.1■□□□□ 0.81
TRAPPC11-204ENST00000505676 FMNL1O95466 1100 aaPredicted RBP20.1■□□□□ 0.81
TRAPPC11-204ENST00000505676 CALM1P0DP23 149 aa20.1■□□□□ 0.81
TRAPPC11-204ENST00000505676 CALM2P0DP24 149 aa20.1■□□□□ 0.81
TRAPPC11-204ENST00000505676 CALM3P0DP25 149 aa20.1■□□□□ 0.81
TRAPPC11-204ENST00000505676 NTRK3Q16288 839 aa20.1■□□□□ 0.81
TRAPPC11-204ENST00000505676 IQCA1Q86XH1 822 aa20.1■□□□□ 0.81
TRAPPC11-204ENST00000505676 TNMDQ9H2S6 317 aa20.1■□□□□ 0.81
TRAPPC11-204ENST00000505676 A0A1W2PQ27 194 aa20.09■□□□□ 0.81
TRAPPC11-204ENST00000505676 A0A1W2PQ64 194 aa20.09■□□□□ 0.81
TRAPPC11-204ENST00000505676 A0A1W2PQD8 194 aa20.09■□□□□ 0.81
TRAPPC11-204ENST00000505676 KLRK1P26718 216 aa20.09■□□□□ 0.81
TRAPPC11-204ENST00000505676 RTN1Q16799 776 aa20.09■□□□□ 0.81
TRAPPC11-204ENST00000505676 SDR42E1Q8WUS8 393 aa20.09■□□□□ 0.81
TRAPPC11-204ENST00000505676 PGBD1Q96JS3 809 aa20.09■□□□□ 0.81
TRAPPC11-204ENST00000505676 LDHBP07195 334 aaKnown RBP20.08■□□□□ 0.81
TRAPPC11-204ENST00000505676 TXNRD1Q16881 649 aa20.08■□□□□ 0.81
TRAPPC11-204ENST00000505676 RRP12Q5JTH9 1297 aaKnown RBP20.08■□□□□ 0.81
TRAPPC11-204ENST00000505676 CCDC73Q6ZRK6 1079 aa20.08■□□□□ 0.81
TRAPPC11-204ENST00000505676 USP28Q96RU2 1077 aa20.08■□□□□ 0.81
TRAPPC11-204ENST00000505676 DACT1Q9NYF0 836 aa20.08■□□□□ 0.81
TRAPPC11-204ENST00000505676 MINDY4BA8MYZ0 360 aa20.08■□□□□ 0.8
TRAPPC11-204ENST00000505676 TRIM37O94972 964 aa20.08■□□□□ 0.8
TRAPPC11-204ENST00000505676 BAG3O95817 575 aa20.08■□□□□ 0.8
TRAPPC11-204ENST00000505676 LIG1P18858 919 aa20.08■□□□□ 0.8
TRAPPC11-204ENST00000505676 KIF23Q02241 960 aaPredicted RBP20.08■□□□□ 0.8
TRAPPC11-204ENST00000505676 MYSM1Q5VVJ2 828 aa20.08■□□□□ 0.8
TRAPPC11-204ENST00000505676 ZNF384Q8TF68 577 aa20.08■□□□□ 0.8
TRAPPC11-204ENST00000505676 NOL10Q9BSC4 688 aaKnown RBP20.08■□□□□ 0.8
TRAPPC11-204ENST00000505676 GGA1Q9UJY5 639 aa20.08■□□□□ 0.8
TRAPPC11-204ENST00000505676 LAMB1P07942 1786 aa20.07■□□□□ 0.8
TRAPPC11-204ENST00000505676 CHAF1AQ13111 956 aaPredicted RBP20.07■□□□□ 0.8
TRAPPC11-204ENST00000505676 RBM28Q9NW13 759 aaKnown RBP20.07■□□□□ 0.8
TRAPPC11-204ENST00000505676 POLRMTO00411 1230 aaKnown RBP20.07■□□□□ 0.8
TRAPPC11-204ENST00000505676 CDC27P30260 824 aa20.07■□□□□ 0.8
TRAPPC11-204ENST00000505676 SEC23AQ15436 765 aa20.07■□□□□ 0.8
TRAPPC11-204ENST00000505676 CCDC178Q5BJE1 867 aa20.07■□□□□ 0.8
TRAPPC11-204ENST00000505676 CTR9Q6PD62 1173 aa20.07■□□□□ 0.8
TRAPPC11-204ENST00000505676 ILDR1Q86SU0 546 aaPredicted RBP20.07■□□□□ 0.8
TRAPPC11-204ENST00000505676 NLGN1Q8N2Q7 840 aa20.07■□□□□ 0.8
TRAPPC11-204ENST00000505676 CCDC24Q8N4L8 307 aa20.07■□□□□ 0.8
TRAPPC11-204ENST00000505676 FAM217BQ9NTX9 383 aaPredicted RBP20.07■□□□□ 0.8
TRAPPC11-204ENST00000505676 TACC3Q9Y6A5 838 aa20.07■□□□□ 0.8
TRAPPC11-204ENST00000505676 WTIPA6NIX2 430 aaPredicted RBP20.06■□□□□ 0.8
TRAPPC11-204ENST00000505676 PPP4CP60510 307 aa20.06■□□□□ 0.8
TRAPPC11-204ENST00000505676 DYNLL1P63167 89 aaKnown RBP20.06■□□□□ 0.8
TRAPPC11-204ENST00000505676 ADALQ6DHV7 355 aa20.06■□□□□ 0.8
TRAPPC11-204ENST00000505676 SLF2Q8IX21 1173 aa20.06■□□□□ 0.8
TRAPPC11-204ENST00000505676 AMOTL1Q8IY63 956 aa20.06■□□□□ 0.8
TRAPPC11-204ENST00000505676 ZNF654Q8IZM8 581 aa20.06■□□□□ 0.8
TRAPPC11-204ENST00000505676 ZSCAN10Q96SZ4 725 aaPredicted RBP20.06■□□□□ 0.8
TRAPPC11-204ENST00000505676 DCP1AQ9NPI6 582 aaPredicted RBP20.06■□□□□ 0.8
TRAPPC11-204ENST00000505676 DDX52Q9Y2R4 599 aaKnown RBP eCLIP20.06■□□□□ 0.8
TRAPPC11-204ENST00000505676 LRRC37AA6NMS7 1700 aa20.06■□□□□ 0.8
TRAPPC11-204ENST00000505676 DDAH1O94760 285 aa20.06■□□□□ 0.8
TRAPPC11-204ENST00000505676 DEXIO95424 95 aa20.06■□□□□ 0.8
TRAPPC11-204ENST00000505676 IL1R1P14778 569 aa20.06■□□□□ 0.8
TRAPPC11-204ENST00000505676 PRDX5P30044 214 aa20.06■□□□□ 0.8
TRAPPC11-204ENST00000505676 GUCY1B3Q02153 619 aa20.06■□□□□ 0.8
TRAPPC11-204ENST00000505676 PDE4BQ07343 736 aa20.06■□□□□ 0.8
TRAPPC11-204ENST00000505676 JMYQ8N9B5 988 aa20.06■□□□□ 0.8
TRAPPC11-204ENST00000505676 TBC1D22AQ8WUA7 517 aa20.06■□□□□ 0.8
TRAPPC11-204ENST00000505676 SAFBQ15424 915 aaKnown RBP eCLIP20.05■□□□□ 0.8
TRAPPC11-204ENST00000505676 LINC00301Q8NCQ3 95 aa20.05■□□□□ 0.8
TRAPPC11-204ENST00000505676 TNKSO95271 1327 aa20.05■□□□□ 0.8
TRAPPC11-204ENST00000505676 U2AF2P26368 475 aaKnown RBP eCLIP20.04■□□□□ 0.81e-7■■□□□ 12.8
TRAPPC11-204ENST00000505676 FOSBP53539 338 aa20.04■□□□□ 0.8
TRAPPC11-204ENST00000505676 FAM160A1Q05DH4 1040 aa20.04■□□□□ 0.8
TRAPPC11-204ENST00000505676 STK38Q15208 465 aa20.04■□□□□ 0.8
TRAPPC11-204ENST00000505676 KRT40Q6A162 431 aa20.04■□□□□ 0.8
TRAPPC11-204ENST00000505676 CATIPQ7Z7H3 387 aa20.04■□□□□ 0.8
TRAPPC11-204ENST00000505676 FANCBQ8NB91 859 aa20.04■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms