RNA–Protein interactions for RNA: ENST00000505657.1

CHD1-203, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 3

Gene CHD1, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-203ENST00000505657 TMEM87AQ8NBN3 555 aa6.68□□□□□ -1.34
CHD1-203ENST00000505657 RNF114Q9Y508 228 aa6.68□□□□□ -1.34
CHD1-203ENST00000505657 SAMM50Q9Y512 469 aa6.68□□□□□ -1.34
CHD1-203ENST00000505657 KIAA1324LA8MWY0 1029 aaPredicted RBP6.67□□□□□ -1.34
CHD1-203ENST00000505657 SART1O43290 800 aaKnown RBP6.67□□□□□ -1.34
CHD1-203ENST00000505657 ADAMTS4O75173 837 aa6.67□□□□□ -1.34
CHD1-203ENST00000505657 TRIM37O94972 964 aa6.67□□□□□ -1.34
CHD1-203ENST00000505657 IGLV1-40P01703 118 aa6.67□□□□□ -1.34
CHD1-203ENST00000505657 VAMP1P23763 118 aa6.67□□□□□ -1.34
CHD1-203ENST00000505657 CDK8P49336 464 aa6.67□□□□□ -1.34
CHD1-203ENST00000505657 HP1BP3Q5SSJ5 553 aaPredicted RBP6.67□□□□□ -1.34
CHD1-203ENST00000505657 CDPF1Q6NVV7 123 aa6.67□□□□□ -1.34
CHD1-203ENST00000505657 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.67□□□□□ -1.34
CHD1-203ENST00000505657 PHC3Q8NDX5 983 aa6.67□□□□□ -1.34
CHD1-203ENST00000505657 MYRFLQ96LU7 910 aa6.67□□□□□ -1.34
CHD1-203ENST00000505657 FAM105AQ9NUU6 356 aa6.67□□□□□ -1.34
CHD1-203ENST00000505657 CYP8B1Q9UNU6 501 aa6.67□□□□□ -1.34
CHD1-203ENST00000505657 RAXQ9Y2V3 346 aa6.67□□□□□ -1.34
CHD1-203ENST00000505657 GAS2O43903 313 aaKnown RBP6.66□□□□□ -1.34
CHD1-203ENST00000505657 BMP3P12645 472 aa6.66□□□□□ -1.34
CHD1-203ENST00000505657 RPS26P62854 115 aaKnown RBP6.66□□□□□ -1.34
CHD1-203ENST00000505657 FANCCQ00597 558 aa6.66□□□□□ -1.34
CHD1-203ENST00000505657 FZD5Q13467 585 aa6.66□□□□□ -1.34
CHD1-203ENST00000505657 LRRC14Q15048 493 aa6.66□□□□□ -1.34
CHD1-203ENST00000505657 UVSSAQ2YD98 709 aa6.66□□□□□ -1.34
CHD1-203ENST00000505657 DYMQ7RTS9 669 aa6.66□□□□□ -1.34
CHD1-203ENST00000505657 ERMP1Q7Z2K6 904 aa6.66□□□□□ -1.34
CHD1-203ENST00000505657 ACSBG1Q96GR2 724 aa6.66□□□□□ -1.34
CHD1-203ENST00000505657 RHOVQ96L33 236 aa6.66□□□□□ -1.34
CHD1-203ENST00000505657 CRIM1Q9NZV1 1036 aa6.66□□□□□ -1.34
CHD1-203ENST00000505657 CSADQ9Y600 493 aa6.66□□□□□ -1.34
CHD1-203ENST00000505657 ARID1BQ8NFD5 2236 aaPredicted RBP6.65□□□□□ -1.34
CHD1-203ENST00000505657 DCDC2CA8MYV0 355 aa6.65□□□□□ -1.34
CHD1-203ENST00000505657 ITGAEP38570 1179 aa6.65□□□□□ -1.34
CHD1-203ENST00000505657 RBM25P49756 843 aaKnown RBP6.65□□□□□ -1.34
CHD1-203ENST00000505657 ID3Q02535 119 aa6.65□□□□□ -1.34
CHD1-203ENST00000505657 ZC3H12AQ5D1E8 599 aaKnown RBP6.65□□□□□ -1.34
CHD1-203ENST00000505657 FAM20CQ8IXL6 584 aa6.65□□□□□ -1.34
CHD1-203ENST00000505657 FBLIM1Q8WUP2 373 aa6.65□□□□□ -1.34
CHD1-203ENST00000505657 FANCD2OSQ96PS1 177 aa6.65□□□□□ -1.34
CHD1-203ENST00000505657 GSX1Q9H4S2 264 aaPredicted RBP6.65□□□□□ -1.34
CHD1-203ENST00000505657 KBTBD4Q9NVX7 518 aa6.65□□□□□ -1.34
CHD1-203ENST00000505657 PCDHA4Q9UN74 947 aa6.65□□□□□ -1.34
CHD1-203ENST00000505657 SYNGAP1Q96PV0 1343 aa6.65□□□□□ -1.35
CHD1-203ENST00000505657 PF4P02776 101 aa6.64□□□□□ -1.35
CHD1-203ENST00000505657 NEFMP07197 916 aa6.64□□□□□ -1.35
CHD1-203ENST00000505657 INPP5AQ14642 412 aa6.64□□□□□ -1.35
CHD1-203ENST00000505657 LRFN4Q6PJG9 635 aa6.64□□□□□ -1.35
CHD1-203ENST00000505657 RSRP1Q9BUV0 290 aa6.64□□□□□ -1.35
CHD1-203ENST00000505657 BCL11AQ9H165 835 aa6.64□□□□□ -1.35
CHD1-203ENST00000505657 DISC1Q9NRI5 854 aa6.64□□□□□ -1.35
CHD1-203ENST00000505657 STOML1Q9UBI4 398 aa6.64□□□□□ -1.35
CHD1-203ENST00000505657 MINDY4BA8MYZ0 360 aa6.63□□□□□ -1.35
CHD1-203ENST00000505657 GSC2O15499 205 aa6.63□□□□□ -1.35
CHD1-203ENST00000505657 DHX15O43143 795 aaKnown RBP6.63□□□□□ -1.35
CHD1-203ENST00000505657 SLFN14P0C7P3 912 aa6.63□□□□□ -1.35
CHD1-203ENST00000505657 RAB6AP20340 208 aa6.63□□□□□ -1.35
CHD1-203ENST00000505657 GARTP22102 1010 aa6.63□□□□□ -1.35
CHD1-203ENST00000505657 MAP4P27816 1152 aaKnown RBP6.63□□□□□ -1.35
CHD1-203ENST00000505657 GBP2P32456 591 aaPredicted RBP6.63□□□□□ -1.35
CHD1-203ENST00000505657 ZNF76P36508 570 aa6.63□□□□□ -1.35
CHD1-203ENST00000505657 ASPAP45381 313 aa6.63□□□□□ -1.35
CHD1-203ENST00000505657 FAM160A1Q05DH4 1040 aa6.63□□□□□ -1.35
CHD1-203ENST00000505657 BNC2Q6ZN30 1099 aaPredicted RBP6.63□□□□□ -1.35
CHD1-203ENST00000505657 C12orf40Q86WS4 652 aa6.63□□□□□ -1.35
CHD1-203ENST00000505657 TMEM74Q96NL1 305 aa6.63□□□□□ -1.35
CHD1-203ENST00000505657 KCNF1Q9H3M0 494 aa6.63□□□□□ -1.35
CHD1-203ENST00000505657 ACSS3Q9H6R3 686 aa6.63□□□□□ -1.35
CHD1-203ENST00000505657 C7orf69Q9H7B7 122 aa6.63□□□□□ -1.35
CHD1-203ENST00000505657 GGT7Q9UJ14 662 aa6.63□□□□□ -1.35
CHD1-203ENST00000505657 HMX2A2RU54 273 aa6.62□□□□□ -1.35
CHD1-203ENST00000505657 HCLS1P14317 486 aaPredicted RBP6.62□□□□□ -1.35
CHD1-203ENST00000505657 NTF4P34130 210 aa6.62□□□□□ -1.35
CHD1-203ENST00000505657 USP11P51784 963 aa6.62□□□□□ -1.35
CHD1-203ENST00000505657 LMNB2Q03252 620 aa6.62□□□□□ -1.35
CHD1-203ENST00000505657 CAMK2GQ13555 558 aaPredicted RBP6.62□□□□□ -1.35
CHD1-203ENST00000505657 TTLL4Q14679 1199 aa6.62□□□□□ -1.35
CHD1-203ENST00000505657 PPM1JQ5JR12 505 aa6.62□□□□□ -1.35
CHD1-203ENST00000505657 BEND4Q6ZU67 534 aa6.62□□□□□ -1.35
CHD1-203ENST00000505657 HS2ST1Q7LGA3 356 aa6.62□□□□□ -1.35
CHD1-203ENST00000505657 UBE3DQ7Z6J8 389 aa6.62□□□□□ -1.35
CHD1-203ENST00000505657 ZDHHC13Q8IUH4 622 aa6.62□□□□□ -1.35
CHD1-203ENST00000505657 TRIM42Q8IWZ5 723 aa6.62□□□□□ -1.35
CHD1-203ENST00000505657 JARID2Q92833 1246 aaPredicted RBP6.62□□□□□ -1.35
CHD1-203ENST00000505657 PLPPR2Q96GM1 343 aa6.62□□□□□ -1.35
CHD1-203ENST00000505657 MIR1-1HGQ9H1L0 117 aa6.62□□□□□ -1.35
CHD1-203ENST00000505657 SEMA6CQ9H3T2 930 aa6.62□□□□□ -1.35
CHD1-203ENST00000505657 HIF3AQ9Y2N7 669 aa6.62□□□□□ -1.35
CHD1-203ENST00000505657 DYNC1LI2O43237 492 aaPredicted RBP6.61□□□□□ -1.35
CHD1-203ENST00000505657 NFICP08651 508 aa6.61□□□□□ -1.35
CHD1-203ENST00000505657 RLBP1P12271 317 aa6.61□□□□□ -1.35
CHD1-203ENST00000505657 SPINK2P20155 84 aa6.61□□□□□ -1.35
CHD1-203ENST00000505657 RXRBP28702 533 aa6.61□□□□□ -1.35
CHD1-203ENST00000505657 RING1Q06587 406 aa6.61□□□□□ -1.35
CHD1-203ENST00000505657 ZNF394Q53GI3 561 aa6.61□□□□□ -1.35
CHD1-203ENST00000505657 WIPI1Q5MNZ9 446 aaPredicted RBP6.61□□□□□ -1.35
CHD1-203ENST00000505657 C9orf131Q5VYM1 1079 aa6.61□□□□□ -1.35
CHD1-203ENST00000505657 SCARA3Q6AZY7 606 aa6.61□□□□□ -1.35
CHD1-203ENST00000505657 METTL16Q86W50 562 aaKnown RBP6.61□□□□□ -1.35
CHD1-203ENST00000505657 RELL1Q8IUW5 271 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms