RNA–Protein interactions for RNA: ENST00000505199.5

SNCA-208, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 411 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-208ENST00000505199 RAD50Q92878 1312 aa14.98□□□□□ -0.01
SNCA-208ENST00000505199 GSPT1P15170 499 aaKnown RBP14.98□□□□□ -0.01
SNCA-208ENST00000505199 SDSP20132 328 aa14.98□□□□□ -0.01
SNCA-208ENST00000505199 METTL16Q86W50 562 aaKnown RBP14.98□□□□□ -0.01
SNCA-208ENST00000505199 C2orf69Q8N8R5 385 aa14.98□□□□□ -0.01
SNCA-208ENST00000505199 MIGA1Q8NAN2 632 aa14.98□□□□□ -0.01
SNCA-208ENST00000505199 RILPL2Q969X0 211 aa14.98□□□□□ -0.01
SNCA-208ENST00000505199 PUS7LQ9H0K6 701 aaKnown RBP14.98□□□□□ -0.01
SNCA-208ENST00000505199 EHD4Q9H223 541 aa14.98□□□□□ -0.01
SNCA-208ENST00000505199 PI4KBQ9UBF8 816 aa14.98□□□□□ -0.01
SNCA-208ENST00000505199 HERC5Q9UII4 1024 aaKnown RBP14.98□□□□□ -0.01
SNCA-208ENST00000505199 DDX60LQ5H9U9 1706 aaKnown RBP14.97□□□□□ -0.01
SNCA-208ENST00000505199 ZMYM6O95789 1325 aa14.97□□□□□ -0.01
SNCA-208ENST00000505199 MBD4O95243 580 aa14.97□□□□□ -0.01
SNCA-208ENST00000505199 CELF2O95319 508 aaKnown RBP14.97□□□□□ -0.01
SNCA-208ENST00000505199 MCMDC2Q4G0Z9 681 aa14.97□□□□□ -0.01
SNCA-208ENST00000505199 CST9Q5W186 159 aa14.97□□□□□ -0.01
SNCA-208ENST00000505199 RUFY2Q8WXA3 655 aa14.97□□□□□ -0.01
SNCA-208ENST00000505199 OSBP2Q969R2 916 aa14.97□□□□□ -0.01
SNCA-208ENST00000505199 STRBPQ96SI9 672 aaKnown RBP14.97□□□□□ -0.01
SNCA-208ENST00000505199 TMEM39BQ9GZU3 492 aa14.97□□□□□ -0.01
SNCA-208ENST00000505199 GBA2Q9HCG7 927 aaPredicted RBP14.97□□□□□ -0.01
SNCA-208ENST00000505199 TRAF5O00463 557 aa14.96□□□□□ -0.01
SNCA-208ENST00000505199 GPAA1O43292 621 aa14.96□□□□□ -0.01
SNCA-208ENST00000505199 HLA-DOAP06340 250 aa14.96□□□□□ -0.01
SNCA-208ENST00000505199 USP5P45974 858 aa14.96□□□□□ -0.01
SNCA-208ENST00000505199 IREB2P48200 963 aaKnown RBP14.96□□□□□ -0.01
SNCA-208ENST00000505199 CACNB3P54284 484 aa14.96□□□□□ -0.01
SNCA-208ENST00000505199 ARMC9Q7Z3E5 817 aa14.96□□□□□ -0.01
SNCA-208ENST00000505199 TTC6Q86TZ1 520 aa14.96□□□□□ -0.01
SNCA-208ENST00000505199 FOXP4Q8IVH2 680 aaPredicted RBP14.96□□□□□ -0.01
SNCA-208ENST00000505199 AMOTL1Q8IY63 956 aa14.96□□□□□ -0.01
SNCA-208ENST00000505199 LCORLQ8N3X6 602 aa14.96□□□□□ -0.01
SNCA-208ENST00000505199 TGFBRAP1Q8WUH2 860 aa14.96□□□□□ -0.01
SNCA-208ENST00000505199 CSRNP1Q96S65 589 aa14.96□□□□□ -0.01
SNCA-208ENST00000505199 NACAP1Q9BZK3 213 aa14.96□□□□□ -0.01
SNCA-208ENST00000505199 DCP1AQ9NPI6 582 aaPredicted RBP14.96□□□□□ -0.01
SNCA-208ENST00000505199 DDX4Q9NQI0 724 aaKnown RBP14.96□□□□□ -0.01
SNCA-208ENST00000505199 DIAPH3Q9NSV4 1193 aa14.96□□□□□ -0.01
SNCA-208ENST00000505199 TLL2Q9Y6L7 1015 aa14.96□□□□□ -0.01
SNCA-208ENST00000505199 NT5C2P49902 561 aa14.95□□□□□ -0.02
SNCA-208ENST00000505199 DYNLL1P63167 89 aaKnown RBP14.95□□□□□ -0.02
SNCA-208ENST00000505199 SAPCD2Q86UD0 394 aa14.95□□□□□ -0.02
SNCA-208ENST00000505199 GINM1Q9NU53 330 aa14.95□□□□□ -0.02
SNCA-208ENST00000505199 ARPP21Q9UBL0 812 aaPredicted RBP14.95□□□□□ -0.02
SNCA-208ENST00000505199 SSC5DA1L4H1 1573 aa14.94□□□□□ -0.02
SNCA-208ENST00000505199 MYH1P12882 1939 aa14.94□□□□□ -0.02
SNCA-208ENST00000505199 RASSF10A6NK89 507 aa14.94□□□□□ -0.02
SNCA-208ENST00000505199 PATL2C9JE40 543 aaKnown RBP14.94□□□□□ -0.02
SNCA-208ENST00000505199 TCP10Q12799 353 aa14.94□□□□□ -0.02
SNCA-208ENST00000505199 PICALMQ13492 652 aa14.94□□□□□ -0.02
SNCA-208ENST00000505199 SBK1Q52WX2 424 aa14.94□□□□□ -0.02
SNCA-208ENST00000505199 LDLRAD1Q5T700 205 aa14.94□□□□□ -0.02
SNCA-208ENST00000505199 NBPF12Q5TAG4 269 aaPredicted RBP14.94□□□□□ -0.02
SNCA-208ENST00000505199 ARMT1Q9H993 441 aa14.94□□□□□ -0.02
SNCA-208ENST00000505199 SLC4A4Q9Y6R1 1079 aa14.94□□□□□ -0.02
SNCA-208ENST00000505199 NAV1Q8NEY1 1877 aa14.94□□□□□ -0.02
SNCA-208ENST00000505199 ALX1Q15699 326 aa14.93□□□□□ -0.02
SNCA-208ENST00000505199 CASC1Q6TDU7 716 aa14.93□□□□□ -0.02
SNCA-208ENST00000505199 ZSCAN29Q8IWY8 852 aaPredicted RBP14.93□□□□□ -0.02
SNCA-208ENST00000505199 ANKRD13AQ8IZ07 590 aa14.93□□□□□ -0.02
SNCA-208ENST00000505199 KLRG1Q96E93 195 aa14.93□□□□□ -0.02
SNCA-208ENST00000505199 ZNF341Q9BYN7 854 aa14.93□□□□□ -0.02
SNCA-208ENST00000505199 SERPINB13Q9UIV8 391 aa14.93□□□□□ -0.02
SNCA-208ENST00000505199 ZNF112Q9UJU3 913 aa14.93□□□□□ -0.02
SNCA-208ENST00000505199 CCDC171Q6TFL3 1326 aa14.92□□□□□ -0.02
SNCA-208ENST00000505199 A0A0D9SFI3 127 aa14.92□□□□□ -0.02
SNCA-208ENST00000505199 DDTLA6NHG4 134 aaPredicted RBP14.92□□□□□ -0.02
SNCA-208ENST00000505199 GSG1L2A8MUP6 293 aa14.92□□□□□ -0.02
SNCA-208ENST00000505199 M0R2C6 588 aa14.92□□□□□ -0.02
SNCA-208ENST00000505199 CHMLP26374 656 aa14.92□□□□□ -0.02
SNCA-208ENST00000505199 SH3BP5LQ7L8J4 393 aa14.92□□□□□ -0.02
SNCA-208ENST00000505199 MAPKAPK5Q8IW41 473 aa14.92□□□□□ -0.02
SNCA-208ENST00000505199 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.92□□□□□ -0.02
SNCA-208ENST00000505199 TBC1D2Q9BYX2 928 aa14.92□□□□□ -0.02
SNCA-208ENST00000505199 ZNF287Q9HBT7 754 aa14.92□□□□□ -0.02
SNCA-208ENST00000505199 SWAP70Q9UH65 585 aa14.92□□□□□ -0.02
SNCA-208ENST00000505199 ROBO3Q96MS0 1386 aa14.91□□□□□ -0.02
SNCA-208ENST00000505199 EIF5BO60841 1220 aaKnown RBP14.91□□□□□ -0.02
SNCA-208ENST00000505199 USP2O75604 605 aaPredicted RBP14.91□□□□□ -0.02
SNCA-208ENST00000505199 ECE1P42892 770 aa14.91□□□□□ -0.02
SNCA-208ENST00000505199 NMIQ13287 307 aaPredicted RBP14.91□□□□□ -0.02
SNCA-208ENST00000505199 NOL9Q5SY16 702 aaKnown RBP14.91□□□□□ -0.02
SNCA-208ENST00000505199 ZFPM1Q8IX07 1006 aa14.91□□□□□ -0.02
SNCA-208ENST00000505199 SDR42E1Q8WUS8 393 aa14.91□□□□□ -0.02
SNCA-208ENST00000505199 CCDC102AQ96A19 550 aa14.91□□□□□ -0.02
SNCA-208ENST00000505199 FAM227BQ96M60 508 aa14.91□□□□□ -0.02
SNCA-208ENST00000505199 DSCC1Q9BVC3 393 aa14.91□□□□□ -0.02
SNCA-208ENST00000505199 MCM9Q9NXL9 1143 aa14.91□□□□□ -0.02
SNCA-208ENST00000505199 CTNND1O60716 968 aaKnown RBP14.9□□□□□ -0.02
SNCA-208ENST00000505199 CHGBP05060 677 aa14.9□□□□□ -0.02
SNCA-208ENST00000505199 POLR3DP05423 398 aaPredicted RBP14.9□□□□□ -0.02
SNCA-208ENST00000505199 PCP11498 1178 aaKnown RBP14.9□□□□□ -0.02
SNCA-208ENST00000505199 HUNKP57058 714 aa14.9□□□□□ -0.02
SNCA-208ENST00000505199 MAP3K9P80192 1104 aa14.9□□□□□ -0.02
SNCA-208ENST00000505199 GABPAQ06546 454 aa14.9□□□□□ -0.02
SNCA-208ENST00000505199 C12orf60Q5U649 245 aa14.9□□□□□ -0.02
SNCA-208ENST00000505199 PRAMEF18Q5VWM3 479 aa14.9□□□□□ -0.02
SNCA-208ENST00000505199 CWC27Q6UX04 472 aaKnown RBP14.9□□□□□ -0.02
SNCA-208ENST00000505199 REM2Q8IYK8 340 aaPredicted RBP14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms