RNA–Protein interactions for RNA: ENST00000505077.1

RFC1-210, Transcript of replication factor C subunit 1, humanhuman

TSL 4

Gene RFC1, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-210ENST00000505077 USP40Q9NVE5 1235 aa12.28□□□□□ -0.44
RFC1-210ENST00000505077 OTOFQ9HC10 1997 aa12.28□□□□□ -0.44
RFC1-210ENST00000505077 ATRNL1Q5VV63 1379 aa12.28□□□□□ -0.44
RFC1-210ENST00000505077 ENTPD3O75355 529 aa12.27□□□□□ -0.45
RFC1-210ENST00000505077 WDHD1O75717 1129 aaPredicted RBP12.27□□□□□ -0.45
RFC1-210ENST00000505077 TNNI2P48788 182 aa12.27□□□□□ -0.45
RFC1-210ENST00000505077 DYNLL1P63167 89 aaKnown RBP12.27□□□□□ -0.45
RFC1-210ENST00000505077 ALX1Q15699 326 aa12.27□□□□□ -0.45
RFC1-210ENST00000505077 NBPF9Q3BBW0 867 aa12.27□□□□□ -0.45
RFC1-210ENST00000505077 SLFNL1Q499Z3 407 aa12.27□□□□□ -0.45
RFC1-210ENST00000505077 AMOTL1Q8IY63 956 aa12.27□□□□□ -0.45
RFC1-210ENST00000505077 ZNF70Q9UC06 446 aaPredicted RBP12.27□□□□□ -0.45
RFC1-210ENST00000505077 PPP2R3BQ9Y5P8 575 aa12.27□□□□□ -0.45
RFC1-210ENST00000505077 SLC4A4Q9Y6R1 1079 aa12.27□□□□□ -0.45
RFC1-210ENST00000505077 FLT1P17948 1338 aa12.27□□□□□ -0.45
RFC1-210ENST00000505077 GREB1LQ9C091 1923 aaPredicted RBP12.27□□□□□ -0.45
RFC1-210ENST00000505077 PATL2C9JE40 543 aaKnown RBP12.26□□□□□ -0.45
RFC1-210ENST00000505077 EGFRP00533 1210 aa12.26□□□□□ -0.45
RFC1-210ENST00000505077 HSPD1P10809 573 aaKnown RBP12.26□□□□□ -0.45
RFC1-210ENST00000505077 USP5P45974 858 aa12.26□□□□□ -0.45
RFC1-210ENST00000505077 CCDC129Q6ZRS4 1044 aa12.26□□□□□ -0.45
RFC1-210ENST00000505077 DHX36Q9H2U1 1008 aaKnown RBP12.26□□□□□ -0.45
RFC1-210ENST00000505077 TDRD3Q9H7E2 651 aaKnown RBP12.26□□□□□ -0.45
RFC1-210ENST00000505077 DCP1AQ9NPI6 582 aaPredicted RBP12.26□□□□□ -0.45
RFC1-210ENST00000505077 TSHZ2Q9NRE2 1034 aa12.26□□□□□ -0.45
RFC1-210ENST00000505077 ARPP21Q9UBL0 812 aaPredicted RBP12.26□□□□□ -0.45
RFC1-210ENST00000505077 CTNNA3Q9UI47 895 aa12.26□□□□□ -0.45
RFC1-210ENST00000505077 MYH4Q9Y623 1939 aa12.26□□□□□ -0.45
RFC1-210ENST00000505077 ROBO3Q96MS0 1386 aa12.26□□□□□ -0.45
RFC1-210ENST00000505077 GSG1L2A8MUP6 293 aa12.25□□□□□ -0.45
RFC1-210ENST00000505077 POTECB2RU33 542 aa12.25□□□□□ -0.45
RFC1-210ENST00000505077 TDO2P48775 406 aa12.25□□□□□ -0.45
RFC1-210ENST00000505077 RBM26Q5T8P6 1007 aaKnown RBP12.25□□□□□ -0.45
RFC1-210ENST00000505077 NAPBQ9H115 298 aa12.25□□□□□ -0.45
RFC1-210ENST00000505077 IL25Q9H293 177 aa12.25□□□□□ -0.45
RFC1-210ENST00000505077 VEZTQ9HBM0 779 aa12.25□□□□□ -0.45
RFC1-210ENST00000505077 ANO2Q9NQ90 1003 aa12.25□□□□□ -0.45
RFC1-210ENST00000505077 GGA3Q9NZ52 723 aa12.25□□□□□ -0.45
RFC1-210ENST00000505077 MKRN1Q9UHC7 482 aaKnown RBP12.25□□□□□ -0.45
RFC1-210ENST00000505077 PGAP2Q9UHJ9 254 aa12.25□□□□□ -0.45
RFC1-210ENST00000505077 PCDHAC2Q9Y5I4 1007 aa12.25□□□□□ -0.45
RFC1-210ENST00000505077 FOXP2O15409 715 aa12.24□□□□□ -0.45
RFC1-210ENST00000505077 APPP05067 770 aa12.24□□□□□ -0.45
RFC1-210ENST00000505077 NT5C2P49902 561 aa12.24□□□□□ -0.45
RFC1-210ENST00000505077 HIRAP54198 1017 aaPredicted RBP12.24□□□□□ -0.45
RFC1-210ENST00000505077 CNTNAP1P78357 1384 aa12.24□□□□□ -0.45
RFC1-210ENST00000505077 SBK1Q52WX2 424 aa12.24□□□□□ -0.45
RFC1-210ENST00000505077 ANGEL2Q5VTE6 544 aaKnown RBP12.24□□□□□ -0.45
RFC1-210ENST00000505077 LDHDQ86WU2 507 aa12.24□□□□□ -0.45
RFC1-210ENST00000505077 IFNL3Q8IZI9 196 aa12.24□□□□□ -0.45
RFC1-210ENST00000505077 TGFBRAP1Q8WUH2 860 aa12.24□□□□□ -0.45
RFC1-210ENST00000505077 SDR42E1Q8WUS8 393 aa12.24□□□□□ -0.45
RFC1-210ENST00000505077 FAM151AQ8WW52 585 aa12.24□□□□□ -0.45
RFC1-210ENST00000505077 MAP4K1Q92918 833 aa12.24□□□□□ -0.45
RFC1-210ENST00000505077 DCPSQ96C86 337 aaKnown RBP12.24□□□□□ -0.45
RFC1-210ENST00000505077 HOOK2Q96ED9 719 aa12.24□□□□□ -0.45
RFC1-210ENST00000505077 LSG1Q9H089 658 aaKnown RBP12.24□□□□□ -0.45
RFC1-210ENST00000505077 OSBPL5Q9H0X9 879 aaPredicted RBP12.24□□□□□ -0.45
RFC1-210ENST00000505077 UPF2Q9HAU5 1272 aaKnown RBP12.24□□□□□ -0.45
RFC1-210ENST00000505077 GPBP1L1Q9HC44 474 aaPredicted RBP12.24□□□□□ -0.45
RFC1-210ENST00000505077 CLRN2A0PK11 232 aa12.23□□□□□ -0.45
RFC1-210ENST00000505077 PRKAB2O43741 272 aa12.23□□□□□ -0.45
RFC1-210ENST00000505077 PCP11498 1178 aaKnown RBP12.23□□□□□ -0.45
RFC1-210ENST00000505077 MCCP23508 829 aa12.23□□□□□ -0.45
RFC1-210ENST00000505077 NFIAQ12857 509 aa12.23□□□□□ -0.45
RFC1-210ENST00000505077 VPS53Q5VIR6 699 aa12.23□□□□□ -0.45
RFC1-210ENST00000505077 RNF20Q5VTR2 975 aa12.23□□□□□ -0.45
RFC1-210ENST00000505077 TTC6Q86TZ1 520 aa12.23□□□□□ -0.45
RFC1-210ENST00000505077 MAPKAPK5Q8IW41 473 aa12.23□□□□□ -0.45
RFC1-210ENST00000505077 SULF1Q8IWU6 871 aa12.23□□□□□ -0.45
RFC1-210ENST00000505077 BACH2Q9BYV9 841 aa12.23□□□□□ -0.45
RFC1-210ENST00000505077 EHD4Q9H223 541 aa12.23□□□□□ -0.45
RFC1-210ENST00000505077 RRAGCQ9HB90 399 aa12.23□□□□□ -0.45
RFC1-210ENST00000505077 EPB41L4AQ9HCS5 686 aaPredicted RBP12.23□□□□□ -0.45
RFC1-210ENST00000505077 NMRK2Q9NPI5 230 aa12.23□□□□□ -0.45
RFC1-210ENST00000505077 MCM9Q9NXL9 1143 aa12.23□□□□□ -0.45
RFC1-210ENST00000505077 FAM198AQ9UFP1 575 aa12.23□□□□□ -0.45
RFC1-210ENST00000505077 PTPRFP10586 1907 aa12.23□□□□□ -0.45
RFC1-210ENST00000505077 FGAP02671 866 aa12.22□□□□□ -0.45
RFC1-210ENST00000505077 HLA-DOAP06340 250 aa12.22□□□□□ -0.45
RFC1-210ENST00000505077 SLC3A2P08195 630 aaKnown RBP12.22□□□□□ -0.45
RFC1-210ENST00000505077 PICALMQ13492 652 aa12.22□□□□□ -0.45
RFC1-210ENST00000505077 IMMTQ16891 758 aaKnown RBP12.22□□□□□ -0.45
RFC1-210ENST00000505077 EAPPQ56P03 285 aaPredicted RBP12.22□□□□□ -0.45
RFC1-210ENST00000505077 DEFB129Q9H1M3 183 aa12.22□□□□□ -0.45
RFC1-210ENST00000505077 ZNF287Q9HBT7 754 aa12.22□□□□□ -0.45
RFC1-210ENST00000505077 DDX4Q9NQI0 724 aaKnown RBP12.22□□□□□ -0.45
RFC1-210ENST00000505077 ANAPC4Q9UJX5 808 aa12.22□□□□□ -0.45
RFC1-210ENST00000505077 PHIPQ8WWQ0 1821 aa12.22□□□□□ -0.45
RFC1-210ENST00000505077 TCP10L2B9ZVM9 353 aa12.21□□□□□ -0.45
RFC1-210ENST00000505077 YY1P25490 414 aa12.21□□□□□ -0.45
RFC1-210ENST00000505077 CACNB3P54284 484 aa12.21□□□□□ -0.45
RFC1-210ENST00000505077 PTH1RQ03431 593 aa12.21□□□□□ -0.45
RFC1-210ENST00000505077 RASA3Q14644 834 aa12.21□□□□□ -0.45
RFC1-210ENST00000505077 C12orf60Q5U649 245 aa12.21□□□□□ -0.45
RFC1-210ENST00000505077 KRT26Q7Z3Y9 468 aa12.21□□□□□ -0.45
RFC1-210ENST00000505077 PI4KBQ9UBF8 816 aa12.21□□□□□ -0.45
RFC1-210ENST00000505077 HERC5Q9UII4 1024 aaKnown RBP12.21□□□□□ -0.45
RFC1-210ENST00000505077 RBM8AQ9Y5S9 174 aaKnown RBP12.21□□□□□ -0.45
RFC1-210ENST00000505077 ASTN2O75129 1339 aaPredicted RBP12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms