RNA–Protein interactions for RNA: ENST00000504959.5

SNX25-203, Transcript of sorting nexin 25, humanhuman

TSL 2

Gene SNX25, Length 1,868 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX25-203ENST00000504959 RHPN1Q8TCX5 695 aa7.04□□□□□ -1.28
SNX25-203ENST00000504959 SNX29Q8TEQ0 813 aa7.04□□□□□ -1.28
SNX25-203ENST00000504959 ITPKCQ96DU7 683 aa7.04□□□□□ -1.28
SNX25-203ENST00000504959 ZFYVE28Q9HCC9 887 aa7.04□□□□□ -1.28
SNX25-203ENST00000504959 NEUROD4Q9HD90 331 aa7.04□□□□□ -1.28
SNX25-203ENST00000504959 KBTBD4Q9NVX7 518 aa7.04□□□□□ -1.28
SNX25-203ENST00000504959 FAM13BQ9NYF5 915 aa7.04□□□□□ -1.28
SNX25-203ENST00000504959 PIK3C2AO00443 1686 aa7.03□□□□□ -1.28
SNX25-203ENST00000504959 RGPD1P0DJD0 1748 aa7.03□□□□□ -1.28
SNX25-203ENST00000504959 F6X3S4 739 aa7.03□□□□□ -1.28
SNX25-203ENST00000504959 GIPC1O14908 333 aa7.03□□□□□ -1.28
SNX25-203ENST00000504959 ZNF853P0CG23 659 aa7.03□□□□□ -1.28
SNX25-203ENST00000504959 KCNA6P17658 529 aa7.03□□□□□ -1.28
SNX25-203ENST00000504959 IDH3AP50213 366 aa7.03□□□□□ -1.28
SNX25-203ENST00000504959 FOXC1Q12948 553 aa7.03□□□□□ -1.28
SNX25-203ENST00000504959 NNTQ13423 1086 aa7.03□□□□□ -1.28
SNX25-203ENST00000504959 DCTN1Q14203 1278 aa7.03□□□□□ -1.28
SNX25-203ENST00000504959 ZNF438Q7Z4V0 828 aa7.03□□□□□ -1.28
SNX25-203ENST00000504959 ZNF775Q96BV0 537 aaPredicted RBP7.03□□□□□ -1.28
SNX25-203ENST00000504959 BCO2Q9BYV7 579 aa7.03□□□□□ -1.28
SNX25-203ENST00000504959 UPF2Q9HAU5 1272 aaKnown RBP7.03□□□□□ -1.28
SNX25-203ENST00000504959 TMEM63CQ9P1W3 806 aa7.03□□□□□ -1.28
SNX25-203ENST00000504959 PIK3R4Q99570 1358 aa7.03□□□□□ -1.28
SNX25-203ENST00000504959 ANKARQ7Z5J8 1434 aa7.03□□□□□ -1.28
SNX25-203ENST00000504959 HDAC1Q13547 482 aaPredicted RBP7.02□□□□□ -1.28
SNX25-203ENST00000504959 XKR5Q6UX68 686 aa7.02□□□□□ -1.28
SNX25-203ENST00000504959 TSPYL6Q8N831 410 aa7.02□□□□□ -1.28
SNX25-203ENST00000504959 RTF1Q92541 710 aaKnown RBP7.02□□□□□ -1.28
SNX25-203ENST00000504959 ARHGAP45Q92619 1136 aa7.02□□□□□ -1.28
SNX25-203ENST00000504959 SUSD3Q96L08 255 aa7.02□□□□□ -1.28
SNX25-203ENST00000504959 SBNO1A3KN83 1393 aa7.02□□□□□ -1.28
SNX25-203ENST00000504959 FLT4P35916 1363 aa7.02□□□□□ -1.28
SNX25-203ENST00000504959 LMTK3Q96Q04 1460 aa7.02□□□□□ -1.28
SNX25-203ENST00000504959 SSH2Q76I76 1423 aa7.02□□□□□ -1.29
SNX25-203ENST00000504959 ARHGEF10O15013 1369 aa7.02□□□□□ -1.29
SNX25-203ENST00000504959 WNT7AO00755 349 aa7.02□□□□□ -1.29
SNX25-203ENST00000504959 C4orf17Q53FE4 359 aa7.02□□□□□ -1.29
SNX25-203ENST00000504959 AIDAQ96BJ3 306 aa7.02□□□□□ -1.29
SNX25-203ENST00000504959 ZBTB40Q9NUA8 1239 aa7.02□□□□□ -1.29
SNX25-203ENST00000504959 KCNMB2Q9Y691 235 aa7.02□□□□□ -1.29
SNX25-203ENST00000504959 MAP3K19Q56UN5 1328 aa7.01□□□□□ -1.29
SNX25-203ENST00000504959 PHACTR2O75167 634 aa7.01□□□□□ -1.29
SNX25-203ENST00000504959 ALDH1A1P00352 501 aa7.01□□□□□ -1.29
SNX25-203ENST00000504959 NUTM2GQ5VZR2 741 aa7.01□□□□□ -1.29
SNX25-203ENST00000504959 MCM10Q7L590 875 aa7.01□□□□□ -1.29
SNX25-203ENST00000504959 C8orf58Q8NAV2 365 aa7.01□□□□□ -1.29
SNX25-203ENST00000504959 RASGRP4Q8TDF6 673 aa7.01□□□□□ -1.29
SNX25-203ENST00000504959 API5Q9BZZ5 524 aaKnown RBP7.01□□□□□ -1.29
SNX25-203ENST00000504959 ZFAND3Q9H8U3 227 aa7.01□□□□□ -1.29
SNX25-203ENST00000504959 ZNF408Q9H9D4 720 aa7.01□□□□□ -1.29
SNX25-203ENST00000504959 ELP3Q9H9T3 547 aa7.01□□□□□ -1.29
SNX25-203ENST00000504959 RTCBQ9Y3I0 505 aaKnown RBP7.01□□□□□ -1.29
SNX25-203ENST00000504959 LTN1O94822 1766 aa7.01□□□□□ -1.29
SNX25-203ENST00000504959 POTECB2RU33 542 aa7□□□□□ -1.29
SNX25-203ENST00000504959 K7ELQ4 463 aaPredicted RBP7□□□□□ -1.29
SNX25-203ENST00000504959 INPP5BP32019 993 aa7□□□□□ -1.29
SNX25-203ENST00000504959 SERINC3Q13530 473 aa7□□□□□ -1.29
SNX25-203ENST00000504959 PDE12Q6L8Q7 609 aaKnown RBP7□□□□□ -1.29
SNX25-203ENST00000504959 CMTR1Q8N1G2 835 aaKnown RBP7□□□□□ -1.29
SNX25-203ENST00000504959 TRIM56Q9BRZ2 755 aaKnown RBP7□□□□□ -1.29
SNX25-203ENST00000504959 KLF16Q9BXK1 252 aaPredicted RBP7□□□□□ -1.29
SNX25-203ENST00000504959 CHRDQ9H2X0 955 aa7□□□□□ -1.29
SNX25-203ENST00000504959 AAASQ9NRG9 546 aa7□□□□□ -1.29
SNX25-203ENST00000504959 TOR4AQ9NXH8 423 aa7□□□□□ -1.29
SNX25-203ENST00000504959 USP54Q70EL1 1684 aa7□□□□□ -1.29
SNX25-203ENST00000504959 UBAP1LF5GYI3 381 aa7□□□□□ -1.29
SNX25-203ENST00000504959 GRNP28799 593 aaKnown RBP7□□□□□ -1.29
SNX25-203ENST00000504959 GRM2Q14416 872 aa7□□□□□ -1.29
SNX25-203ENST00000504959 IER5Q5VY09 327 aa7□□□□□ -1.29
SNX25-203ENST00000504959 CKAP2LQ8IYA6 745 aa7□□□□□ -1.29
SNX25-203ENST00000504959 SPON2Q9BUD6 331 aa7□□□□□ -1.29
SNX25-203ENST00000504959 SRCIN1Q9C0H9 1055 aa7□□□□□ -1.29
SNX25-203ENST00000504959 ADAMTS1Q9UHI8 967 aa7□□□□□ -1.29
SNX25-203ENST00000504959 MARF1Q9Y4F3 1742 aaKnown RBP7□□□□□ -1.29
SNX25-203ENST00000504959 EREGO14944 169 aa6.99□□□□□ -1.29
SNX25-203ENST00000504959 ST8SIA5O15466 376 aa6.99□□□□□ -1.29
SNX25-203ENST00000504959 GADD45BO75293 160 aaPredicted RBP6.99□□□□□ -1.29
SNX25-203ENST00000504959 ZIC2O95409 532 aaPredicted RBP6.99□□□□□ -1.29
SNX25-203ENST00000504959 BECN1Q14457 450 aa6.99□□□□□ -1.29
SNX25-203ENST00000504959 GRIP2Q9C0E4 1043 aa6.99□□□□□ -1.29
SNX25-203ENST00000504959 MRVI1Q9Y6F6 885 aa6.99□□□□□ -1.29
SNX25-203ENST00000504959 CHL1O00533 1208 aa6.98□□□□□ -1.29
SNX25-203ENST00000504959 RAB11FIP3O75154 756 aa6.98□□□□□ -1.29
SNX25-203ENST00000504959 PHKA2P46019 1235 aa6.98□□□□□ -1.29
SNX25-203ENST00000504959 ARSDP51689 593 aa6.98□□□□□ -1.29
SNX25-203ENST00000504959 MTHFSDQ2M296 383 aaKnown RBP6.98□□□□□ -1.29
SNX25-203ENST00000504959 GNASQ5JWF2 1037 aa6.98□□□□□ -1.29
SNX25-203ENST00000504959 KIAA0825Q8IV33 1275 aa6.98□□□□□ -1.29
SNX25-203ENST00000504959 SMC5Q8IY18 1101 aa6.98□□□□□ -1.29
SNX25-203ENST00000504959 CRIPAKQ8N1N5 446 aa6.98□□□□□ -1.29
SNX25-203ENST00000504959 C1orf127Q8N9H9 656 aa6.98□□□□□ -1.29
SNX25-203ENST00000504959 GCC1Q96CN9 775 aa6.98□□□□□ -1.29
SNX25-203ENST00000504959 LTV1Q96GA3 475 aaPredicted RBP6.98□□□□□ -1.29
SNX25-203ENST00000504959 CNTN3Q9P232 1028 aa6.98□□□□□ -1.29
SNX25-203ENST00000504959 TSPYL4Q9UJ04 414 aa6.98□□□□□ -1.29
SNX25-203ENST00000504959 FNDC3AQ9Y2H6 1198 aaKnown RBP6.98□□□□□ -1.29
SNX25-203ENST00000504959 ABCC4O15439 1325 aa6.98□□□□□ -1.29
SNX25-203ENST00000504959 KIF24Q5T7B8 1368 aa6.98□□□□□ -1.29
SNX25-203ENST00000504959 KIAA0232Q92628 1395 aa6.98□□□□□ -1.29
SNX25-203ENST00000504959 CACNA1FO60840 1977 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms