RNA–Protein interactions for RNA: ENST00000504677.5

POLR2J3-210, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 5

Gene POLR2J3, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-210ENST00000504677 TPCN1Q9ULQ1 816 aa14.09□□□□□ -0.15
POLR2J3-210ENST00000504677 NEDD4P46934 1319 aa14.09□□□□□ -0.15
POLR2J3-210ENST00000504677 MINDY4BA8MYZ0 360 aa14.08□□□□□ -0.16
POLR2J3-210ENST00000504677 USP17L12C9JPN9 530 aa14.08□□□□□ -0.16
POLR2J3-210ENST00000504677 USP17L21D6R901 530 aa14.08□□□□□ -0.16
POLR2J3-210ENST00000504677 FGRP09769 529 aa14.08□□□□□ -0.16
POLR2J3-210ENST00000504677 EVCP57679 992 aa14.08□□□□□ -0.16
POLR2J3-210ENST00000504677 RHBDL3P58872 404 aa14.08□□□□□ -0.16
POLR2J3-210ENST00000504677 NUCB2P80303 420 aa14.08□□□□□ -0.16
POLR2J3-210ENST00000504677 CTDSPL2Q05D32 466 aa14.08□□□□□ -0.16
POLR2J3-210ENST00000504677 SART3Q15020 963 aaKnown RBP14.08□□□□□ -0.16
POLR2J3-210ENST00000504677 CTR9Q6PD62 1173 aa14.08□□□□□ -0.16
POLR2J3-210ENST00000504677 ESR2Q92731 530 aa14.08□□□□□ -0.16
POLR2J3-210ENST00000504677 BRF1Q92994 677 aa14.08□□□□□ -0.16
POLR2J3-210ENST00000504677 TCEANC2Q96MN5 208 aa14.08□□□□□ -0.16
POLR2J3-210ENST00000504677 ZDHHC15Q96MV8 337 aa14.08□□□□□ -0.16
POLR2J3-210ENST00000504677 MCM9Q9NXL9 1143 aa14.08□□□□□ -0.16
POLR2J3-210ENST00000504677 MKRN1Q9UHC7 482 aaKnown RBP14.08□□□□□ -0.16
POLR2J3-210ENST00000504677 SERPINA10Q9UK55 444 aa14.08□□□□□ -0.16
POLR2J3-210ENST00000504677 ZNRF3Q9ULT6 936 aa14.08□□□□□ -0.16
POLR2J3-210ENST00000504677 BCS1LQ9Y276 419 aa14.08□□□□□ -0.16
POLR2J3-210ENST00000504677 YDJCA8MPS7 323 aa14.07□□□□□ -0.16
POLR2J3-210ENST00000504677 B4E1Z4 1266 aa14.07□□□□□ -0.16
POLR2J3-210ENST00000504677 F8W031 263 aaPredicted RBP14.07□□□□□ -0.16
POLR2J3-210ENST00000504677 ORC4O43929 436 aa14.07□□□□□ -0.16
POLR2J3-210ENST00000504677 PDIA4P13667 645 aaKnown RBP14.07□□□□□ -0.16
POLR2J3-210ENST00000504677 CRKP46108 304 aa14.07□□□□□ -0.16
POLR2J3-210ENST00000504677 MMP14P50281 582 aa14.07□□□□□ -0.16
POLR2J3-210ENST00000504677 PDE4BQ07343 736 aa14.07□□□□□ -0.16
POLR2J3-210ENST00000504677 ME3Q16798 604 aa14.07□□□□□ -0.16
POLR2J3-210ENST00000504677 RSBN1LQ6PCB5 846 aaPredicted RBP14.07□□□□□ -0.16
POLR2J3-210ENST00000504677 JDP2Q8WYK2 163 aa14.07□□□□□ -0.16
POLR2J3-210ENST00000504677 ZNF274Q96GC6 653 aaPredicted RBP14.07□□□□□ -0.16
POLR2J3-210ENST00000504677 ZNF287Q9HBT7 754 aa14.07□□□□□ -0.16
POLR2J3-210ENST00000504677 FOXD4L1Q9NU39 408 aa14.07□□□□□ -0.16
POLR2J3-210ENST00000504677 ANGEL1Q9UNK9 670 aaKnown RBP14.07□□□□□ -0.16
POLR2J3-210ENST00000504677 MYH1P12882 1939 aa14.06□□□□□ -0.16
POLR2J3-210ENST00000504677 ERICH2A1L162 156 aa14.06□□□□□ -0.16
POLR2J3-210ENST00000504677 PFKFB2O60825 505 aa14.06□□□□□ -0.16
POLR2J3-210ENST00000504677 ANTXR2P58335 489 aa14.06□□□□□ -0.16
POLR2J3-210ENST00000504677 COL9A3Q14050 684 aaPredicted RBP14.06□□□□□ -0.16
POLR2J3-210ENST00000504677 C12orf60Q5U649 245 aa14.06□□□□□ -0.16
POLR2J3-210ENST00000504677 KIAA0825Q8IV33 1275 aa14.06□□□□□ -0.16
POLR2J3-210ENST00000504677 CCDC83Q8IWF9 413 aa14.06□□□□□ -0.16
POLR2J3-210ENST00000504677 TGFBRAP1Q8WUH2 860 aa14.06□□□□□ -0.16
POLR2J3-210ENST00000504677 GTF3C6Q969F1 213 aa14.06□□□□□ -0.16
POLR2J3-210ENST00000504677 TOMM22Q9NS69 142 aa14.06□□□□□ -0.16
POLR2J3-210ENST00000504677 HDAC9Q9UKV0 1011 aa14.06□□□□□ -0.16
POLR2J3-210ENST00000504677 SMC3Q9UQE7 1217 aa14.06□□□□□ -0.16
POLR2J3-210ENST00000504677 COL4A5P29400 1685 aa14.06□□□□□ -0.16
POLR2J3-210ENST00000504677 FLT1P17948 1338 aa14.06□□□□□ -0.16
POLR2J3-210ENST00000504677 ADAMTSL1Q8N6G6 1762 aa14.06□□□□□ -0.16
POLR2J3-210ENST00000504677 NFKBIEO00221 500 aa14.05□□□□□ -0.16
POLR2J3-210ENST00000504677 SH2B2O14492 632 aaPredicted RBP14.05□□□□□ -0.16
POLR2J3-210ENST00000504677 KDM4AO75164 1064 aa14.05□□□□□ -0.16
POLR2J3-210ENST00000504677 LARGE1O95461 756 aa14.05□□□□□ -0.16
POLR2J3-210ENST00000504677 VIL1P09327 827 aaKnown RBP14.05□□□□□ -0.16
POLR2J3-210ENST00000504677 LIFRP42702 1097 aa14.05□□□□□ -0.16
POLR2J3-210ENST00000504677 TMTC2Q8N394 836 aa14.05□□□□□ -0.16
POLR2J3-210ENST00000504677 AGBL3Q8NEM8 1001 aa14.05□□□□□ -0.16
POLR2J3-210ENST00000504677 LLPHQ9BRT6 129 aaKnown RBP14.05□□□□□ -0.16
POLR2J3-210ENST00000504677 MXD3Q9BW11 206 aa14.05□□□□□ -0.16
POLR2J3-210ENST00000504677 LRRC2Q9BYS8 371 aa14.05□□□□□ -0.16
POLR2J3-210ENST00000504677 KCNQ5Q9NR82 932 aa14.05□□□□□ -0.16
POLR2J3-210ENST00000504677 TAOK2Q9UL54 1235 aa14.05□□□□□ -0.16
POLR2J3-210ENST00000504677 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.05□□□□□ -0.16
POLR2J3-210ENST00000504677 NPM3O75607 178 aaKnown RBP14.04□□□□□ -0.16
POLR2J3-210ENST00000504677 POLR3DP05423 398 aaPredicted RBP14.04□□□□□ -0.16
POLR2J3-210ENST00000504677 SCNN1DP51172 638 aa14.04□□□□□ -0.16
POLR2J3-210ENST00000504677 RCAN1P53805 252 aa14.04□□□□□ -0.16
POLR2J3-210ENST00000504677 APOBRQ0VD83 1088 aa14.04□□□□□ -0.16
POLR2J3-210ENST00000504677 RAB3GAP1Q15042 981 aa14.04□□□□□ -0.16
POLR2J3-210ENST00000504677 RRP12Q5JTH9 1297 aaKnown RBP14.04□□□□□ -0.16
POLR2J3-210ENST00000504677 CYB5R4Q7L1T6 521 aa14.04□□□□□ -0.16
POLR2J3-210ENST00000504677 CHST3Q7LGC8 479 aa14.04□□□□□ -0.16
POLR2J3-210ENST00000504677 SGMS1Q86VZ5 419 aa14.04□□□□□ -0.16
POLR2J3-210ENST00000504677 IQCA1Q86XH1 822 aa14.04□□□□□ -0.16
POLR2J3-210ENST00000504677 MAPKAPK5Q8IW41 473 aa14.04□□□□□ -0.16
POLR2J3-210ENST00000504677 UBAC1Q9BSL1 405 aa14.04□□□□□ -0.16
POLR2J3-210ENST00000504677 KIF3AQ9Y496 699 aa14.04□□□□□ -0.16
POLR2J3-210ENST00000504677 PSMD14O00487 310 aa14.03□□□□□ -0.16
POLR2J3-210ENST00000504677 IFIT3O14879 490 aaKnown RBP14.03□□□□□ -0.16
POLR2J3-210ENST00000504677 DHX16O60231 1041 aaKnown RBP14.03□□□□□ -0.16
POLR2J3-210ENST00000504677 USP17L8P0C7I0 530 aa14.03□□□□□ -0.16
POLR2J3-210ENST00000504677 TNIP1Q15025 636 aa14.03□□□□□ -0.16
POLR2J3-210ENST00000504677 CCDC178Q5BJE1 867 aa14.03□□□□□ -0.16
POLR2J3-210ENST00000504677 TMEM67Q5HYA8 995 aa14.03□□□□□ -0.16
POLR2J3-210ENST00000504677 CIAPIN1Q6FI81 312 aa14.03□□□□□ -0.16
POLR2J3-210ENST00000504677 APOBEC3HQ6NTF7 200 aaKnown RBP14.03□□□□□ -0.16
POLR2J3-210ENST00000504677 TTC6Q86TZ1 520 aa14.03□□□□□ -0.16
POLR2J3-210ENST00000504677 OGFOD1Q8N543 542 aa14.03□□□□□ -0.16
POLR2J3-210ENST00000504677 NLGN2Q8NFZ4 835 aa14.03□□□□□ -0.16
POLR2J3-210ENST00000504677 LARP6Q9BRS8 491 aaKnown RBP14.03□□□□□ -0.16
POLR2J3-210ENST00000504677 USP40Q9NVE5 1235 aa14.03□□□□□ -0.16
POLR2J3-210ENST00000504677 ZSWIM5Q9P217 1185 aa14.03□□□□□ -0.16
POLR2J3-210ENST00000504677 COL2A1P02458 1487 aaPredicted RBP14.03□□□□□ -0.16
POLR2J3-210ENST00000504677 NID2Q14112 1375 aa14.02□□□□□ -0.17
POLR2J3-210ENST00000504677 CYP2D7A0A087X1C5 515 aa14.02□□□□□ -0.17
POLR2J3-210ENST00000504677 KLF18A0A0U1RQI7 1052 aa14.02□□□□□ -0.17
POLR2J3-210ENST00000504677 GOLGA8BA8MQT2 603 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms