RNA–Protein interactions for RNA: ENST00000504676.5

CSNK1A1-204, Transcript of casein kinase 1 alpha 1, humanhuman

TSL 2 BASIC

Gene CSNK1A1, Length 1,772 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1-204ENST00000504676 RNF135Q8IUD6 432 aa8.34□□□□□ -1.07
CSNK1A1-204ENST00000504676 ANKRD24Q8TF21 1146 aa8.34□□□□□ -1.07
CSNK1A1-204ENST00000504676 COPRSQ9NQ92 184 aa8.34□□□□□ -1.07
CSNK1A1-204ENST00000504676 DDX41Q9UJV9 622 aaKnown RBP8.34□□□□□ -1.07
CSNK1A1-204ENST00000504676 NSFL1CQ9UNZ2 370 aaKnown RBP8.34□□□□□ -1.07
CSNK1A1-204ENST00000504676 JCADQ9P266 1359 aa8.34□□□□□ -1.07
CSNK1A1-204ENST00000504676 MRC1P22897 1456 aa8.34□□□□□ -1.07
CSNK1A1-204ENST00000504676 TMEM94Q12767 1356 aa8.33□□□□□ -1.08
CSNK1A1-204ENST00000504676 KCNQ3O43525 872 aa8.33□□□□□ -1.08
CSNK1A1-204ENST00000504676 LDHBP07195 334 aaKnown RBP8.33□□□□□ -1.08
CSNK1A1-204ENST00000504676 FKBP4Q02790 459 aaKnown RBP eCLIP8.33□□□□□ -1.08
CSNK1A1-204ENST00000504676 NCOA4Q13772 614 aa8.33□□□□□ -1.08
CSNK1A1-204ENST00000504676 HSP90AA2PQ14568 343 aaPredicted RBP8.33□□□□□ -1.08
CSNK1A1-204ENST00000504676 USPL1Q5W0Q7 1092 aa8.33□□□□□ -1.08
CSNK1A1-204ENST00000504676 MPRIPQ6WCQ1 1025 aa8.33□□□□□ -1.08
CSNK1A1-204ENST00000504676 FERMT3Q86UX7 667 aa8.33□□□□□ -1.08
CSNK1A1-204ENST00000504676 AACSQ86V21 672 aa8.33□□□□□ -1.08
CSNK1A1-204ENST00000504676 RBM33Q96EV2 1170 aaKnown RBP8.33□□□□□ -1.08
CSNK1A1-204ENST00000504676 PRIMPOLQ96LW4 560 aa8.33□□□□□ -1.08
CSNK1A1-204ENST00000504676 MPHOSPH6Q99547 160 aaKnown RBP8.33□□□□□ -1.08
CSNK1A1-204ENST00000504676 PDCL3Q9H2J4 239 aa8.33□□□□□ -1.08
CSNK1A1-204ENST00000504676 SEPT3Q9UH03 358 aa8.33□□□□□ -1.08
CSNK1A1-204ENST00000504676 MTMR6Q9Y217 621 aa8.33□□□□□ -1.08
CSNK1A1-204ENST00000504676 TREHO43280 583 aa8.33□□□□□ -1.08
CSNK1A1-204ENST00000504676 CAVIN2O95810 425 aa8.33□□□□□ -1.08
CSNK1A1-204ENST00000504676 ATP5JP18859 108 aa8.33□□□□□ -1.08
CSNK1A1-204ENST00000504676 CREB3L3Q68CJ9 461 aa8.33□□□□□ -1.08
CSNK1A1-204ENST00000504676 PCGF5Q86SE9 256 aa8.33□□□□□ -1.08
CSNK1A1-204ENST00000504676 KHSRPQ92945 711 aaKnown RBP eCLIP8.33□□□□□ -1.088e-8■■□□□ 14.2
CSNK1A1-204ENST00000504676 JAKMIP1Q96N16 626 aaKnown RBP8.33□□□□□ -1.08
CSNK1A1-204ENST00000504676 METTL22Q9BUU2 404 aaPredicted RBP8.33□□□□□ -1.08
CSNK1A1-204ENST00000504676 SCAND2PQ9GZW5 306 aaPredicted RBP8.33□□□□□ -1.08
CSNK1A1-204ENST00000504676 USP25Q9UHP3 1055 aa8.33□□□□□ -1.08
CSNK1A1-204ENST00000504676 SPG7Q9UQ90 795 aa8.33□□□□□ -1.08
CSNK1A1-204ENST00000504676 SIPA1L3O60292 1781 aaPredicted RBP8.32□□□□□ -1.08
CSNK1A1-204ENST00000504676 KIF1AQ12756 1690 aa8.32□□□□□ -1.08
CSNK1A1-204ENST00000504676 ATP5J2-PTCD1G3V325 749 aa8.32□□□□□ -1.08
CSNK1A1-204ENST00000504676 GADD45BO75293 160 aaPredicted RBP8.32□□□□□ -1.08
CSNK1A1-204ENST00000504676 SASH1O94885 1247 aa8.32□□□□□ -1.08
CSNK1A1-204ENST00000504676 SLC34A2O95436 690 aa8.32□□□□□ -1.08
CSNK1A1-204ENST00000504676 GJB2P29033 226 aa8.32□□□□□ -1.08
CSNK1A1-204ENST00000504676 PTH1RQ03431 593 aa8.32□□□□□ -1.08
CSNK1A1-204ENST00000504676 NR6A1Q15406 480 aa8.32□□□□□ -1.08
CSNK1A1-204ENST00000504676 PRPF40BQ6NWY9 871 aaKnown RBP8.32□□□□□ -1.08
CSNK1A1-204ENST00000504676 ZNF790Q6PG37 636 aa8.32□□□□□ -1.08
CSNK1A1-204ENST00000504676 SDR16C5Q8N3Y7 309 aa8.32□□□□□ -1.08
CSNK1A1-204ENST00000504676 KAZALD1Q96I82 304 aa8.32□□□□□ -1.08
CSNK1A1-204ENST00000504676 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.32□□□□□ -1.081e-14■□□□□ 10.2
CSNK1A1-204ENST00000504676 FUCA2Q9BTY2 467 aa8.32□□□□□ -1.08
CSNK1A1-204ENST00000504676 RBM8AQ9Y5S9 174 aaKnown RBP8.32□□□□□ -1.08
CSNK1A1-204ENST00000504676 MED23Q9ULK4 1368 aa8.31□□□□□ -1.08
CSNK1A1-204ENST00000504676 NEURL1BA8MQ27 555 aa8.31□□□□□ -1.08
CSNK1A1-204ENST00000504676 DYNC1I1O14576 645 aa8.31□□□□□ -1.08
CSNK1A1-204ENST00000504676 SLC27A2O14975 620 aa8.31□□□□□ -1.08
CSNK1A1-204ENST00000504676 CD53P19397 219 aa8.31□□□□□ -1.08
CSNK1A1-204ENST00000504676 KRT85P78386 507 aa8.31□□□□□ -1.08
CSNK1A1-204ENST00000504676 KIAA2012Q0VF49 1180 aa8.31□□□□□ -1.08
CSNK1A1-204ENST00000504676 GCKRQ14397 625 aa8.31□□□□□ -1.08
CSNK1A1-204ENST00000504676 RABL6Q3YEC7 729 aaPredicted RBP8.31□□□□□ -1.08
CSNK1A1-204ENST00000504676 TTC39BQ5VTQ0 682 aaPredicted RBP8.31□□□□□ -1.08
CSNK1A1-204ENST00000504676 BLOC1S2Q6QNY1 142 aa8.31□□□□□ -1.08
CSNK1A1-204ENST00000504676 EAF2Q96CJ1 260 aaPredicted RBP8.31□□□□□ -1.08
CSNK1A1-204ENST00000504676 SUCLG2Q96I99 432 aa8.31□□□□□ -1.08
CSNK1A1-204ENST00000504676 APBA2Q99767 749 aa8.31□□□□□ -1.08
CSNK1A1-204ENST00000504676 RBCK1Q9BYM8 510 aa8.31□□□□□ -1.08
CSNK1A1-204ENST00000504676 C12orf49Q9H741 205 aa8.31□□□□□ -1.08
CSNK1A1-204ENST00000504676 SLC52A2Q9HAB3 445 aa8.31□□□□□ -1.08
CSNK1A1-204ENST00000504676 ARHGEF10LQ9HCE6 1279 aa8.31□□□□□ -1.08
CSNK1A1-204ENST00000504676 NPHP4O75161 1426 aaPredicted RBP8.31□□□□□ -1.08
CSNK1A1-204ENST00000504676 SETD1BQ9UPS6 1966 aaKnown RBP8.31□□□□□ -1.08
CSNK1A1-204ENST00000504676 RGS20O76081 388 aa8.3□□□□□ -1.08
CSNK1A1-204ENST00000504676 FGAP02671 866 aa8.3□□□□□ -1.08
CSNK1A1-204ENST00000504676 SNRPA1P09661 255 aaKnown RBP8.3□□□□□ -1.08
CSNK1A1-204ENST00000504676 CCDC192P0DO97 292 aa8.3□□□□□ -1.08
CSNK1A1-204ENST00000504676 RPS6KB1P23443 525 aa8.3□□□□□ -1.08
CSNK1A1-204ENST00000504676 KCNJ4P48050 445 aa8.3□□□□□ -1.08
CSNK1A1-204ENST00000504676 HMGN5P82970 282 aaKnown RBP8.3□□□□□ -1.08
CSNK1A1-204ENST00000504676 LARP1BQ659C4 914 aaKnown RBP8.3□□□□□ -1.08
CSNK1A1-204ENST00000504676 ATL3Q6DD88 541 aa8.3□□□□□ -1.08
CSNK1A1-204ENST00000504676 SASS6Q6UVJ0 657 aa8.3□□□□□ -1.08
CSNK1A1-204ENST00000504676 WDR75Q8IWA0 830 aaKnown RBP8.3□□□□□ -1.08
CSNK1A1-204ENST00000504676 PNMA1Q8ND90 353 aa8.3□□□□□ -1.08
CSNK1A1-204ENST00000504676 RAPGEF4Q8WZA2 1011 aa8.3□□□□□ -1.08
CSNK1A1-204ENST00000504676 LRRC59Q96AG4 307 aaKnown RBP8.3□□□□□ -1.08
CSNK1A1-204ENST00000504676 LLPHQ9BRT6 129 aaKnown RBP8.3□□□□□ -1.08
CSNK1A1-204ENST00000504676 BICC1Q9H694 974 aaKnown RBP8.3□□□□□ -1.08
CSNK1A1-204ENST00000504676 GPR108Q9NPR9 543 aa8.3□□□□□ -1.08
CSNK1A1-204ENST00000504676 CHST12Q9NRB3 414 aa8.3□□□□□ -1.08
CSNK1A1-204ENST00000504676 CNPY2Q9Y2B0 182 aa8.3□□□□□ -1.08
CSNK1A1-204ENST00000504676 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.3□□□□□ -1.08
CSNK1A1-204ENST00000504676 IGKV5-2P06315 115 aa8.3□□□□□ -1.08
CSNK1A1-204ENST00000504676 TATP17735 454 aaPredicted RBP8.3□□□□□ -1.08
CSNK1A1-204ENST00000504676 PSMD2Q13200 908 aa8.3□□□□□ -1.08
CSNK1A1-204ENST00000504676 NMIQ13287 307 aaPredicted RBP8.3□□□□□ -1.08
CSNK1A1-204ENST00000504676 ME3Q16798 604 aa8.3□□□□□ -1.08
CSNK1A1-204ENST00000504676 PROSER3Q2NL68 480 aa8.3□□□□□ -1.08
CSNK1A1-204ENST00000504676 SYCP2LQ5T4T6 812 aa8.3□□□□□ -1.08
CSNK1A1-204ENST00000504676 ANKRD13DQ6ZTN6 518 aa8.3□□□□□ -1.08
CSNK1A1-204ENST00000504676 KRT28Q7Z3Y7 464 aa8.3□□□□□ -1.08
CSNK1A1-204ENST00000504676 CCDC83Q8IWF9 413 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms