RNA–Protein interactions for RNA: ENST00000504526.1

TRAPPC11-203, Transcript of trafficking protein particle complex 11, humanhuman

TSL 4

Gene TRAPPC11, Length 503 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-203ENST00000504526 IDH1O75874 414 aaKnown RBP25.79■■□□□ 1.72
TRAPPC11-203ENST00000504526 ALDH1A1P00352 501 aa25.79■■□□□ 1.72
TRAPPC11-203ENST00000504526 PPP4CP60510 307 aa25.79■■□□□ 1.72
TRAPPC11-203ENST00000504526 PICALMQ13492 652 aa25.79■■□□□ 1.72
TRAPPC11-203ENST00000504526 CERS3Q8IU89 383 aa25.79■■□□□ 1.72
TRAPPC11-203ENST00000504526 DDX4Q9NQI0 724 aaKnown RBP25.79■■□□□ 1.72
TRAPPC11-203ENST00000504526 ZNF112Q9UJU3 913 aa25.79■■□□□ 1.72
TRAPPC11-203ENST00000504526 TEX11Q8IYF3 940 aa25.78■■□□□ 1.72
TRAPPC11-203ENST00000504526 SPDYE5A6NIY4 337 aa25.77■■□□□ 1.72
TRAPPC11-203ENST00000504526 GJA5P36382 358 aa25.77■■□□□ 1.72
TRAPPC11-203ENST00000504526 ERO1BQ86YB8 467 aa25.77■■□□□ 1.72
TRAPPC11-203ENST00000504526 CRBNQ96SW2 442 aa25.77■■□□□ 1.72
TRAPPC11-203ENST00000504526 BCL11AQ9H165 835 aa25.77■■□□□ 1.72
TRAPPC11-203ENST00000504526 AATFQ9NY61 560 aaKnown RBP eCLIP25.77■■□□□ 1.72
TRAPPC11-203ENST00000504526 SNCAIPQ9Y6H5 919 aa25.77■■□□□ 1.72
TRAPPC11-203ENST00000504526 ATRNL1Q5VV63 1379 aa25.77■■□□□ 1.72
TRAPPC11-203ENST00000504526 ATP5JP18859 108 aa25.76■■□□□ 1.71
TRAPPC11-203ENST00000504526 CYP7A1P22680 504 aa25.76■■□□□ 1.71
TRAPPC11-203ENST00000504526 AAMPQ13685 434 aa25.76■■□□□ 1.71
TRAPPC11-203ENST00000504526 OTUD7BQ6GQQ9 843 aa25.76■■□□□ 1.71
TRAPPC11-203ENST00000504526 SH3BP5LQ7L8J4 393 aa25.76■■□□□ 1.71
TRAPPC11-203ENST00000504526 SH3RF3Q8TEJ3 882 aaPredicted RBP25.76■■□□□ 1.71
TRAPPC11-203ENST00000504526 ZKSCAN4Q969J2 545 aaPredicted RBP25.76■■□□□ 1.71
TRAPPC11-203ENST00000504526 ANTXR1Q9H6X2 564 aa25.76■■□□□ 1.71
TRAPPC11-203ENST00000504526 PCDHB15Q9Y5E8 787 aa25.76■■□□□ 1.71
TRAPPC11-203ENST00000504526 NDUFB9Q9Y6M9 179 aa25.76■■□□□ 1.71
TRAPPC11-203ENST00000504526 COL2A1P02458 1487 aaPredicted RBP25.76■■□□□ 1.71
TRAPPC11-203ENST00000504526 AK9Q5TCS8 1911 aa25.76■■□□□ 1.71
TRAPPC11-203ENST00000504526 LAMB1P07942 1786 aa25.75■■□□□ 1.71
TRAPPC11-203ENST00000504526 TESPA1A2RU30 521 aaPredicted RBP25.75■■□□□ 1.71
TRAPPC11-203ENST00000504526 DDTLA6NHG4 134 aaPredicted RBP25.75■■□□□ 1.71
TRAPPC11-203ENST00000504526 GTF2A2P52657 109 aa25.75■■□□□ 1.71
TRAPPC11-203ENST00000504526 MAP3K10Q02779 954 aa25.75■■□□□ 1.71
TRAPPC11-203ENST00000504526 IFNL1Q8IU54 200 aa25.75■■□□□ 1.71
TRAPPC11-203ENST00000504526 OTUD5Q96G74 571 aa25.75■■□□□ 1.71
TRAPPC11-203ENST00000504526 CFHR5Q9BXR6 569 aa25.75■■□□□ 1.71
TRAPPC11-203ENST00000504526 OSBPL5Q9H0X9 879 aaPredicted RBP25.75■■□□□ 1.71
TRAPPC11-203ENST00000504526 INPP5BP32019 993 aa25.74■■□□□ 1.71
TRAPPC11-203ENST00000504526 NOL9Q5SY16 702 aaKnown RBP25.74■■□□□ 1.71
TRAPPC11-203ENST00000504526 ADGRA1Q86SQ6 560 aa25.74■■□□□ 1.71
TRAPPC11-203ENST00000504526 MAGEB6Q8N7X4 407 aa25.74■■□□□ 1.71
TRAPPC11-203ENST00000504526 DOCK2Q92608 1830 aa25.73■■□□□ 1.71
TRAPPC11-203ENST00000504526 SMARCA5O60264 1052 aaPredicted RBP25.73■■□□□ 1.71
TRAPPC11-203ENST00000504526 PPATQ06203 517 aa25.73■■□□□ 1.71
TRAPPC11-203ENST00000504526 NOM1Q5C9Z4 860 aaKnown RBP25.73■■□□□ 1.71
TRAPPC11-203ENST00000504526 DNAJC2Q99543 621 aaKnown RBP25.73■■□□□ 1.71
TRAPPC11-203ENST00000504526 DHX36Q9H2U1 1008 aaKnown RBP25.73■■□□□ 1.71
TRAPPC11-203ENST00000504526 TBC1D12O60347 775 aa25.72■■□□□ 1.71
TRAPPC11-203ENST00000504526 PPIL2Q13356 520 aa25.72■■□□□ 1.71
TRAPPC11-203ENST00000504526 CNKSR2Q8WXI2 1034 aa25.72■■□□□ 1.71
TRAPPC11-203ENST00000504526 MS4A4AQ96JQ5 239 aa25.72■■□□□ 1.71
TRAPPC11-203ENST00000504526 GOLIM4O00461 696 aa25.71■■□□□ 1.71
TRAPPC11-203ENST00000504526 GPATCH3Q96I76 525 aa25.71■■□□□ 1.71
TRAPPC11-203ENST00000504526 HAUS7Q99871 368 aa25.71■■□□□ 1.71
TRAPPC11-203ENST00000504526 BOLA2Q9H3K6 86 aa25.71■■□□□ 1.71
TRAPPC11-203ENST00000504526 MYO5AQ9Y4I1 1855 aaKnown RBP25.7■■□□□ 1.71
TRAPPC11-203ENST00000504526 PHF20L1A8MW92 1017 aa25.7■■□□□ 1.7
TRAPPC11-203ENST00000504526 IGF2BP3O00425 579 aaKnown RBP eCLIP25.7■■□□□ 1.7
TRAPPC11-203ENST00000504526 TBC1D8O95759 1140 aa25.7■■□□□ 1.7
TRAPPC11-203ENST00000504526 TGFBRAP1Q8WUH2 860 aa25.7■■□□□ 1.7
TRAPPC11-203ENST00000504526 ECHDC1Q9NTX5 307 aa25.7■■□□□ 1.7
TRAPPC11-203ENST00000504526 PAG1Q9NWQ8 432 aa25.7■■□□□ 1.7
TRAPPC11-203ENST00000504526 SNAPC2Q13487 334 aa25.69■■□□□ 1.7
TRAPPC11-203ENST00000504526 SLC9C2Q5TAH2 1124 aa25.69■■□□□ 1.7
TRAPPC11-203ENST00000504526 SCYL3Q8IZE3 742 aa25.69■■□□□ 1.7
TRAPPC11-203ENST00000504526 FLT1P17948 1338 aa25.68■■□□□ 1.7
TRAPPC11-203ENST00000504526 CCL15-CCL14A0A0B4J2E2 113 aa25.68■■□□□ 1.7
TRAPPC11-203ENST00000504526 IRF6O14896 467 aa25.68■■□□□ 1.7
TRAPPC11-203ENST00000504526 CTNND1O60716 968 aaKnown RBP25.68■■□□□ 1.7
TRAPPC11-203ENST00000504526 CETPP11597 493 aa25.68■■□□□ 1.7
TRAPPC11-203ENST00000504526 DYNLL1P63167 89 aaKnown RBP25.68■■□□□ 1.7
TRAPPC11-203ENST00000504526 CCL15Q16663 113 aa25.68■■□□□ 1.7
TRAPPC11-203ENST00000504526 MIGA1Q8NAN2 632 aa25.68■■□□□ 1.7
TRAPPC11-203ENST00000504526 XPO5Q9HAV4 1204 aaKnown RBP eCLIP25.68■■□□□ 1.7
TRAPPC11-203ENST00000504526 PICK1Q9NRD5 415 aa25.68■■□□□ 1.7
TRAPPC11-203ENST00000504526 PI4KBQ9UBF8 816 aa25.68■■□□□ 1.7
TRAPPC11-203ENST00000504526 HERC5Q9UII4 1024 aaKnown RBP25.68■■□□□ 1.7
TRAPPC11-203ENST00000504526 GPR25O00155 361 aa25.67■■□□□ 1.7
TRAPPC11-203ENST00000504526 PDE6AP16499 860 aa25.67■■□□□ 1.7
TRAPPC11-203ENST00000504526 MAPKAPK5Q8IW41 473 aa25.67■■□□□ 1.7
TRAPPC11-203ENST00000504526 BRI3BPQ8WY22 251 aa25.67■■□□□ 1.7
TRAPPC11-203ENST00000504526 PTPN18Q99952 460 aa25.67■■□□□ 1.7
TRAPPC11-203ENST00000504526 DDX24Q9GZR7 859 aaKnown RBP eCLIP25.67■■□□□ 1.7
TRAPPC11-203ENST00000504526 ZCCHC17Q9NP64 241 aaKnown RBP25.66■■□□□ 1.7
TRAPPC11-203ENST00000504526 KCNH4Q9UQ05 1017 aa25.66■■□□□ 1.7
TRAPPC11-203ENST00000504526 CASP8AP2Q9UKL3 1982 aa25.65■■□□□ 1.7
TRAPPC11-203ENST00000504526 USP5P45974 858 aa25.65■■□□□ 1.7
TRAPPC11-203ENST00000504526 HDAC1Q13547 482 aaPredicted RBP25.65■■□□□ 1.7
TRAPPC11-203ENST00000504526 EDC3Q96F86 508 aaKnown RBP25.65■■□□□ 1.7
TRAPPC11-203ENST00000504526 ZBTB47Q9UFB7 747 aaPredicted RBP25.65■■□□□ 1.7
TRAPPC11-203ENST00000504526 ZNF532Q9HCE3 1301 aa25.64■■□□□ 1.7
TRAPPC11-203ENST00000504526 MAGEB6P1A0A0J9YX57 407 aa25.64■■□□□ 1.7
TRAPPC11-203ENST00000504526 FOXP4Q8IVH2 680 aaPredicted RBP25.64■■□□□ 1.7
TRAPPC11-203ENST00000504526 ZNF296Q8WUU4 475 aaPredicted RBP25.64■■□□□ 1.7
TRAPPC11-203ENST00000504526 GCC1Q96CN9 775 aa25.64■■□□□ 1.7
TRAPPC11-203ENST00000504526 RIOK1Q9BRS2 568 aaKnown RBP25.64■■□□□ 1.7
TRAPPC11-203ENST00000504526 CXCL11O14625 94 aa25.63■■□□□ 1.69
TRAPPC11-203ENST00000504526 HLA-DOAP06340 250 aa25.63■■□□□ 1.69
TRAPPC11-203ENST00000504526 PTPRAP18433 802 aa25.63■■□□□ 1.69
TRAPPC11-203ENST00000504526 FOCADQ5VW36 1801 aa25.63■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms