RNA–Protein interactions for RNA: ENST00000504430.5

NIPBL-204, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 2

Gene NIPBL, Length 3,455 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-204ENST00000504430 SLC4A9Q96Q91 983 aa6.37□□□□□ -1.39
NIPBL-204ENST00000504430 SELENOOQ9BVL4 669 aa6.37□□□□□ -1.39
NIPBL-204ENST00000504430 LRRC4BQ9NT99 713 aa6.37□□□□□ -1.39
NIPBL-204ENST00000504430 FAM86C1Q9NVL1 165 aa6.37□□□□□ -1.39
NIPBL-204ENST00000504430 CWC25Q9NXE8 425 aaPredicted RBP6.37□□□□□ -1.39
NIPBL-204ENST00000504430 TRHDEQ9UKU6 1024 aa6.37□□□□□ -1.39
NIPBL-204ENST00000504430 PCDHB5Q9Y5E4 795 aa6.37□□□□□ -1.39
NIPBL-204ENST00000504430 GABRDO14764 452 aa6.37□□□□□ -1.39
NIPBL-204ENST00000504430 GRIN3BO60391 1043 aa6.37□□□□□ -1.39
NIPBL-204ENST00000504430 ZSCAN20P17040 1043 aaPredicted RBP6.37□□□□□ -1.39
NIPBL-204ENST00000504430 ABCB5Q2M3G0 1257 aa6.37□□□□□ -1.39
NIPBL-204ENST00000504430 FAM102BQ5T8I3 360 aa6.37□□□□□ -1.39
NIPBL-204ENST00000504430 CFAP161Q6P656 301 aa6.37□□□□□ -1.39
NIPBL-204ENST00000504430 CMTR1Q8N1G2 835 aaKnown RBP6.37□□□□□ -1.39
NIPBL-204ENST00000504430 PPHLN1Q8NEY8 458 aaKnown RBP6.37□□□□□ -1.39
NIPBL-204ENST00000504430 ZFYVE28Q9HCC9 887 aa6.37□□□□□ -1.39
NIPBL-204ENST00000504430 PLAAQ9Y263 795 aa6.37□□□□□ -1.39
NIPBL-204ENST00000504430 METTL12A8MUP2 240 aa6.37□□□□□ -1.39
NIPBL-204ENST00000504430 ALG1L2C9J202 215 aa6.37□□□□□ -1.39
NIPBL-204ENST00000504430 PCSK2P16519 638 aa6.37□□□□□ -1.39
NIPBL-204ENST00000504430 FSHRP23945 695 aa6.37□□□□□ -1.39
NIPBL-204ENST00000504430 VASH1Q7L8A9 365 aaPredicted RBP6.37□□□□□ -1.39
NIPBL-204ENST00000504430 LSRQ86X29 649 aaPredicted RBP6.37□□□□□ -1.39
NIPBL-204ENST00000504430 CNKSR1Q969H4 720 aa6.37□□□□□ -1.39
NIPBL-204ENST00000504430 CHRDQ9H2X0 955 aa6.37□□□□□ -1.39
NIPBL-204ENST00000504430 USP25Q9UHP3 1055 aa6.37□□□□□ -1.39
NIPBL-204ENST00000504430 ZBTB21Q9ULJ3 1066 aa6.37□□□□□ -1.39
NIPBL-204ENST00000504430 TNKSO95271 1327 aa6.37□□□□□ -1.39
NIPBL-204ENST00000504430 SH3BP2P78314 561 aa6.36□□□□□ -1.39
NIPBL-204ENST00000504430 CLCQ05315 142 aa6.36□□□□□ -1.39
NIPBL-204ENST00000504430 AKAP4Q5JQC9 854 aa6.36□□□□□ -1.39
NIPBL-204ENST00000504430 RASIP1Q5U651 963 aa6.36□□□□□ -1.39
NIPBL-204ENST00000504430 SLC12A5Q9H2X9 1139 aa6.36□□□□□ -1.39
NIPBL-204ENST00000504430 CXorf56Q9H5V9 222 aa6.36□□□□□ -1.39
NIPBL-204ENST00000504430 ADCY3O60266 1144 aa6.36□□□□□ -1.39
NIPBL-204ENST00000504430 EYA4O95677 639 aa6.36□□□□□ -1.39
NIPBL-204ENST00000504430 CYP2E1P05181 493 aaPredicted RBP6.36□□□□□ -1.39
NIPBL-204ENST00000504430 ACPPP15309 386 aa6.36□□□□□ -1.39
NIPBL-204ENST00000504430 GIPRP48546 466 aa6.36□□□□□ -1.39
NIPBL-204ENST00000504430 ZNF460Q14592 562 aa6.36□□□□□ -1.39
NIPBL-204ENST00000504430 DOK7Q18PE1 504 aa6.36□□□□□ -1.39
NIPBL-204ENST00000504430 LRRTM3Q86VH5 581 aa6.36□□□□□ -1.39
NIPBL-204ENST00000504430 TCEAL8Q8IYN2 117 aa6.36□□□□□ -1.39
NIPBL-204ENST00000504430 WDR66Q8TBY9 1149 aa6.36□□□□□ -1.39
NIPBL-204ENST00000504430 CRBNQ96SW2 442 aa6.36□□□□□ -1.39
NIPBL-204ENST00000504430 BRMS1Q9HCU9 246 aa6.36□□□□□ -1.39
NIPBL-204ENST00000504430 RIC8AQ9NPQ8 531 aa6.36□□□□□ -1.39
NIPBL-204ENST00000504430 TSR3Q9UJK0 312 aaKnown RBP6.36□□□□□ -1.39
NIPBL-204ENST00000504430 GTF2A1LQ9UNN4 478 aa6.36□□□□□ -1.39
NIPBL-204ENST00000504430 LIG3P49916 1009 aa6.35□□□□□ -1.39
NIPBL-204ENST00000504430 ZYXQ15942 572 aaKnown RBP6.35□□□□□ -1.39
NIPBL-204ENST00000504430 RTN1Q16799 776 aa6.35□□□□□ -1.39
NIPBL-204ENST00000504430 TNNI3KQ59H18 835 aa6.35□□□□□ -1.39
NIPBL-204ENST00000504430 SNX32Q86XE0 403 aa6.35□□□□□ -1.39
NIPBL-204ENST00000504430 EXOC2Q96KP1 924 aa6.35□□□□□ -1.39
NIPBL-204ENST00000504430 DDX24Q9GZR7 859 aaKnown RBP eCLIP6.35□□□□□ -1.39
NIPBL-204ENST00000504430 NBPF7P0C2Y1 421 aaPredicted RBP6.35□□□□□ -1.39
NIPBL-204ENST00000504430 NAT2P11245 290 aa6.35□□□□□ -1.39
NIPBL-204ENST00000504430 STK3Q13188 491 aa6.35□□□□□ -1.39
NIPBL-204ENST00000504430 GRM1Q13255 1194 aa6.35□□□□□ -1.39
NIPBL-204ENST00000504430 DNAJC21Q5F1R6 531 aaKnown RBP6.35□□□□□ -1.39
NIPBL-204ENST00000504430 GPATCH4Q5T3I0 446 aaKnown RBP6.35□□□□□ -1.39
NIPBL-204ENST00000504430 PJA1Q8NG27 643 aa6.35□□□□□ -1.39
NIPBL-204ENST00000504430 TBC1D20Q96BZ9 403 aa6.35□□□□□ -1.39
NIPBL-204ENST00000504430 LRCH3Q96II8 777 aa6.35□□□□□ -1.39
NIPBL-204ENST00000504430 ELP3Q9H9T3 547 aa6.35□□□□□ -1.39
NIPBL-204ENST00000504430 A0A1W2PRQ8 180 aa6.35□□□□□ -1.39
NIPBL-204ENST00000504430 BICDL2A1A5D9 508 aa6.35□□□□□ -1.39
NIPBL-204ENST00000504430 CCNFP41002 786 aa6.35□□□□□ -1.39
NIPBL-204ENST00000504430 NUCB1Q02818 461 aa6.35□□□□□ -1.39
NIPBL-204ENST00000504430 CHAF1AQ13111 956 aaPredicted RBP6.35□□□□□ -1.39
NIPBL-204ENST00000504430 TRIM14Q14142 442 aa6.35□□□□□ -1.39
NIPBL-204ENST00000504430 GRM3Q14832 879 aa6.35□□□□□ -1.39
NIPBL-204ENST00000504430 SEPT2Q15019 361 aa6.35□□□□□ -1.39
NIPBL-204ENST00000504430 PCBP1Q15365 356 aaKnown RBP eCLIP6.35□□□□□ -1.39
NIPBL-204ENST00000504430 COBLL1Q53SF7 1204 aa6.35□□□□□ -1.39
NIPBL-204ENST00000504430 PEAR1Q5VY43 1037 aaPredicted RBP6.35□□□□□ -1.39
NIPBL-204ENST00000504430 ZCCHC8Q6NZY4 707 aaKnown RBP6.35□□□□□ -1.39
NIPBL-204ENST00000504430 KRT77Q7Z794 578 aa6.35□□□□□ -1.39
NIPBL-204ENST00000504430 ZBTB46Q86UZ6 589 aa6.35□□□□□ -1.39
NIPBL-204ENST00000504430 SMAP1Q8IYB5 467 aaPredicted RBP6.35□□□□□ -1.39
NIPBL-204ENST00000504430 SCLT1Q96NL6 688 aa6.35□□□□□ -1.39
NIPBL-204ENST00000504430 OXCT2Q9BYC2 517 aaPredicted RBP6.35□□□□□ -1.39
NIPBL-204ENST00000504430 GTF2IRD1Q9UHL9 959 aa6.35□□□□□ -1.39
NIPBL-204ENST00000504430 HAX1O00165 279 aa6.34□□□□□ -1.39
NIPBL-204ENST00000504430 MTA2O94776 668 aa6.34□□□□□ -1.39
NIPBL-204ENST00000504430 MICAL2O94851 1124 aa6.34□□□□□ -1.39
NIPBL-204ENST00000504430 GSTT1P30711 240 aa6.34□□□□□ -1.39
NIPBL-204ENST00000504430 MTFR1Q15390 333 aa6.34□□□□□ -1.39
NIPBL-204ENST00000504430 FXNQ16595 210 aa6.34□□□□□ -1.39
NIPBL-204ENST00000504430 ATP13A4Q4VNC1 1196 aa6.34□□□□□ -1.39
NIPBL-204ENST00000504430 FAM209AQ5JX71 171 aa6.34□□□□□ -1.39
NIPBL-204ENST00000504430 FAM196AQ6ZSG2 479 aa6.34□□□□□ -1.39
NIPBL-204ENST00000504430 JMYQ8N9B5 988 aa6.34□□□□□ -1.39
NIPBL-204ENST00000504430 SNX29Q8TEQ0 813 aa6.34□□□□□ -1.39
NIPBL-204ENST00000504430 LGR6Q9HBX8 967 aa6.34□□□□□ -1.39
NIPBL-204ENST00000504430 PLCB1Q9NQ66 1216 aa6.34□□□□□ -1.39
NIPBL-204ENST00000504430 SLC5A4Q9NY91 659 aa6.34□□□□□ -1.39
NIPBL-204ENST00000504430 PPP4R3AQ6IN85 833 aa6.34□□□□□ -1.39
NIPBL-204ENST00000504430 RASSF3Q86WH2 238 aa6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms