RNA–Protein interactions for RNA: ENST00000504289.1

COL1A1-210, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 481 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-210ENST00000504289 CALM2P0DP24 149 aa11.42□□□□□ -0.58
COL1A1-210ENST00000504289 CALM3P0DP25 149 aa11.42□□□□□ -0.58
COL1A1-210ENST00000504289 PRKCSHP14314 528 aaPredicted RBP11.42□□□□□ -0.58
COL1A1-210ENST00000504289 PPP4CP60510 307 aa11.42□□□□□ -0.58
COL1A1-210ENST00000504289 RBM6P78332 1123 aaKnown RBP11.42□□□□□ -0.58
COL1A1-210ENST00000504289 WTAPQ15007 396 aa11.42□□□□□ -0.58
COL1A1-210ENST00000504289 MAP3K11Q16584 847 aa11.42□□□□□ -0.58
COL1A1-210ENST00000504289 CCDC178Q5BJE1 867 aa11.42□□□□□ -0.58
COL1A1-210ENST00000504289 FAM182BQ5T319 152 aa11.42□□□□□ -0.58
COL1A1-210ENST00000504289 NFXL1Q6ZNB6 911 aa11.42□□□□□ -0.58
COL1A1-210ENST00000504289 NLGN1Q8N2Q7 840 aa11.42□□□□□ -0.58
COL1A1-210ENST00000504289 KCNG4Q8TDN1 519 aa11.42□□□□□ -0.58
COL1A1-210ENST00000504289 UBAC1Q9BSL1 405 aa11.42□□□□□ -0.58
COL1A1-210ENST00000504289 NUP62CLQ9H1M0 184 aa11.42□□□□□ -0.58
COL1A1-210ENST00000504289 ARPP21Q9UBL0 812 aaPredicted RBP11.42□□□□□ -0.58
COL1A1-210ENST00000504289 MYH13Q9UKX3 1938 aa11.42□□□□□ -0.58
COL1A1-210ENST00000504289 MYH15Q9Y2K3 1946 aa11.42□□□□□ -0.58
COL1A1-210ENST00000504289 CCDC88AQ3V6T2 1871 aa11.42□□□□□ -0.58
COL1A1-210ENST00000504289 GOLGA8AA7E2F4 631 aa11.41□□□□□ -0.58
COL1A1-210ENST00000504289 PRKAB2O43741 272 aa11.41□□□□□ -0.58
COL1A1-210ENST00000504289 IARSP41252 1262 aaKnown RBP11.41□□□□□ -0.58
COL1A1-210ENST00000504289 MECOMQ03112 1051 aa11.41□□□□□ -0.58
COL1A1-210ENST00000504289 CTDSPL2Q05D32 466 aa11.41□□□□□ -0.58
COL1A1-210ENST00000504289 TRIM29Q14134 588 aa11.41□□□□□ -0.58
COL1A1-210ENST00000504289 NTRK3Q16288 839 aa11.41□□□□□ -0.58
COL1A1-210ENST00000504289 AMIGO3Q86WK7 504 aa11.41□□□□□ -0.58
COL1A1-210ENST00000504289 SLF2Q8IX21 1173 aa11.41□□□□□ -0.58
COL1A1-210ENST00000504289 TRIM22Q8IYM9 498 aa11.41□□□□□ -0.58
COL1A1-210ENST00000504289 MIGA1Q8NAN2 632 aa11.41□□□□□ -0.58
COL1A1-210ENST00000504289 FUCA2Q9BTY2 467 aa11.41□□□□□ -0.58
COL1A1-210ENST00000504289 CLSTN2Q9H4D0 955 aa11.41□□□□□ -0.58
COL1A1-210ENST00000504289 GPHNQ9NQX3 736 aaPredicted RBP11.41□□□□□ -0.58
COL1A1-210ENST00000504289 ANKIB1Q9P2G1 1089 aa11.41□□□□□ -0.58
COL1A1-210ENST00000504289 TFIP11Q9UBB9 837 aaKnown RBP11.41□□□□□ -0.58
COL1A1-210ENST00000504289 TAF1P21675 1872 aa11.4□□□□□ -0.58
COL1A1-210ENST00000504289 TNRC6CQ9HCJ0 1690 aaKnown RBP11.4□□□□□ -0.58
COL1A1-210ENST00000504289 FMNL1O95466 1100 aaPredicted RBP11.4□□□□□ -0.58
COL1A1-210ENST00000504289 BAG3O95817 575 aa11.4□□□□□ -0.58
COL1A1-210ENST00000504289 IL1R1P14778 569 aa11.4□□□□□ -0.58
COL1A1-210ENST00000504289 SSRP1Q08945 709 aaKnown RBP11.4□□□□□ -0.58
COL1A1-210ENST00000504289 TXNRD1Q16881 649 aa11.4□□□□□ -0.58
COL1A1-210ENST00000504289 ADALQ6DHV7 355 aa11.4□□□□□ -0.58
COL1A1-210ENST00000504289 ADGRA1Q86SQ6 560 aa11.4□□□□□ -0.58
COL1A1-210ENST00000504289 IQCA1Q86XH1 822 aa11.4□□□□□ -0.58
COL1A1-210ENST00000504289 TBC1D22AQ8WUA7 517 aa11.4□□□□□ -0.58
COL1A1-210ENST00000504289 RBM28Q9NW13 759 aaKnown RBP11.4□□□□□ -0.58
COL1A1-210ENST00000504289 SUGT1Q9Y2Z0 365 aa11.4□□□□□ -0.58
COL1A1-210ENST00000504289 MORC2Q9Y6X9 1032 aaPredicted RBP11.4□□□□□ -0.58
COL1A1-210ENST00000504289 POLRMTO00411 1230 aaKnown RBP11.39□□□□□ -0.59
COL1A1-210ENST00000504289 DDAH1O94760 285 aa11.39□□□□□ -0.59
COL1A1-210ENST00000504289 DEXIO95424 95 aa11.39□□□□□ -0.59
COL1A1-210ENST00000504289 LDHBP07195 334 aaKnown RBP11.39□□□□□ -0.59
COL1A1-210ENST00000504289 PLCG2P16885 1265 aa11.39□□□□□ -0.59
COL1A1-210ENST00000504289 U2AF2P26368 475 aaKnown RBP eCLIP11.39□□□□□ -0.59
COL1A1-210ENST00000504289 KIF23Q02241 960 aaPredicted RBP11.39□□□□□ -0.59
COL1A1-210ENST00000504289 PDE4BQ07343 736 aa11.39□□□□□ -0.59
COL1A1-210ENST00000504289 SEC23AQ15436 765 aa11.39□□□□□ -0.59
COL1A1-210ENST00000504289 RTN1Q16799 776 aa11.39□□□□□ -0.59
COL1A1-210ENST00000504289 MYSM1Q5VVJ2 828 aa11.39□□□□□ -0.59
COL1A1-210ENST00000504289 FAM173BQ6P4H8 233 aa11.39□□□□□ -0.59
COL1A1-210ENST00000504289 CTR9Q6PD62 1173 aa11.39□□□□□ -0.59
COL1A1-210ENST00000504289 CCDC73Q6ZRK6 1079 aa11.39□□□□□ -0.59
COL1A1-210ENST00000504289 DZIP1Q86YF9 867 aaKnown RBP11.39□□□□□ -0.59
COL1A1-210ENST00000504289 AMOTL1Q8IY63 956 aa11.39□□□□□ -0.59
COL1A1-210ENST00000504289 FAM177A1Q8N128 213 aaPredicted RBP11.39□□□□□ -0.59
COL1A1-210ENST00000504289 JMYQ8N9B5 988 aa11.39□□□□□ -0.59
COL1A1-210ENST00000504289 BICD2Q8TD16 824 aa11.39□□□□□ -0.59
COL1A1-210ENST00000504289 ZNF384Q8TF68 577 aa11.39□□□□□ -0.59
COL1A1-210ENST00000504289 FAM163AQ96GL9 167 aaPredicted RBP11.39□□□□□ -0.59
COL1A1-210ENST00000504289 PGBD1Q96JS3 809 aa11.39□□□□□ -0.59
COL1A1-210ENST00000504289 MAP3K14Q99558 947 aa11.39□□□□□ -0.59
COL1A1-210ENST00000504289 NOL10Q9BSC4 688 aaKnown RBP11.39□□□□□ -0.59
COL1A1-210ENST00000504289 ALG1Q9BT22 464 aa11.39□□□□□ -0.59
COL1A1-210ENST00000504289 TNMDQ9H2S6 317 aa11.39□□□□□ -0.59
COL1A1-210ENST00000504289 FAM217BQ9NTX9 383 aaPredicted RBP11.39□□□□□ -0.59
COL1A1-210ENST00000504289 GGA1Q9UJY5 639 aa11.39□□□□□ -0.59
COL1A1-210ENST00000504289 IQSEC3Q9UPP2 1182 aaPredicted RBP11.39□□□□□ -0.59
COL1A1-210ENST00000504289 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.39□□□□□ -0.59
COL1A1-210ENST00000504289 BRWD3Q6RI45 1802 aa11.38□□□□□ -0.59
COL1A1-210ENST00000504289 FAM160A1Q05DH4 1040 aa11.38□□□□□ -0.59
COL1A1-210ENST00000504289 SAFBQ15424 915 aaKnown RBP eCLIP11.38□□□□□ -0.59
COL1A1-210ENST00000504289 CATIPQ7Z7H3 387 aa11.38□□□□□ -0.59
COL1A1-210ENST00000504289 MICU3Q86XE3 530 aa11.38□□□□□ -0.59
COL1A1-210ENST00000504289 SP8Q8IXZ3 490 aa11.38□□□□□ -0.59
COL1A1-210ENST00000504289 FANCBQ8NB91 859 aa11.38□□□□□ -0.59
COL1A1-210ENST00000504289 LINC00301Q8NCQ3 95 aa11.38□□□□□ -0.59
COL1A1-210ENST00000504289 USP28Q96RU2 1077 aa11.38□□□□□ -0.59
COL1A1-210ENST00000504289 ZSCAN10Q96SZ4 725 aaPredicted RBP11.38□□□□□ -0.59
COL1A1-210ENST00000504289 RNF26Q9BY78 433 aaPredicted RBP11.38□□□□□ -0.59
COL1A1-210ENST00000504289 ZNF287Q9HBT7 754 aa11.38□□□□□ -0.59
COL1A1-210ENST00000504289 DCP1AQ9NPI6 582 aaPredicted RBP11.38□□□□□ -0.59
COL1A1-210ENST00000504289 DACT1Q9NYF0 836 aa11.38□□□□□ -0.59
COL1A1-210ENST00000504289 TFCP2L1Q9NZI6 479 aa11.38□□□□□ -0.59
COL1A1-210ENST00000504289 FAM205AQ6ZU69 1335 aa11.37□□□□□ -0.59
COL1A1-210ENST00000504289 MINDY4BA8MYZ0 360 aa11.37□□□□□ -0.59
COL1A1-210ENST00000504289 PPP6R2O75170 966 aa11.37□□□□□ -0.59
COL1A1-210ENST00000504289 TRIM37O94972 964 aa11.37□□□□□ -0.59
COL1A1-210ENST00000504289 XBP1P17861 261 aa11.37□□□□□ -0.59
COL1A1-210ENST00000504289 LIG1P18858 919 aa11.37□□□□□ -0.59
COL1A1-210ENST00000504289 CDC27P30260 824 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms