RNA–Protein interactions for RNA: ENST00000504010.5

NR1I3-219, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 944 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-219ENST00000504010 NKX2-3Q8TAU0 364 aa11.05□□□□□ -0.64
NR1I3-219ENST00000504010 DPF3Q92784 378 aa11.05□□□□□ -0.64
NR1I3-219ENST00000504010 DNAJC2Q99543 621 aaKnown RBP11.05□□□□□ -0.64
NR1I3-219ENST00000504010 HTATIP2Q9BUP3 242 aa11.05□□□□□ -0.64
NR1I3-219ENST00000504010 RTN4Q9NQC3 1192 aaKnown RBP11.05□□□□□ -0.64
NR1I3-219ENST00000504010 HMG20BQ9P0W2 317 aa11.05□□□□□ -0.64
NR1I3-219ENST00000504010 NR2E3Q9Y5X4 410 aa11.05□□□□□ -0.64
NR1I3-219ENST00000504010 LAMA2P24043 3122 aaKnown RBP11.05□□□□□ -0.64
NR1I3-219ENST00000504010 WDHD1O75717 1129 aaPredicted RBP11.04□□□□□ -0.64
NR1I3-219ENST00000504010 PRMT2P55345 433 aa11.04□□□□□ -0.64
NR1I3-219ENST00000504010 GPR153Q6NV75 609 aa11.04□□□□□ -0.64
NR1I3-219ENST00000504010 DEFB129Q9H1M3 183 aa11.04□□□□□ -0.64
NR1I3-219ENST00000504010 ANTXR1Q9H6X2 564 aa11.04□□□□□ -0.64
NR1I3-219ENST00000504010 PCDHAC2Q9Y5I4 1007 aa11.04□□□□□ -0.64
NR1I3-219ENST00000504010 PTCH2Q9Y6C5 1203 aa11.04□□□□□ -0.64
NR1I3-219ENST00000504010 CHGBP05060 677 aa11.03□□□□□ -0.64
NR1I3-219ENST00000504010 ARID4AP29374 1257 aaPredicted RBP11.03□□□□□ -0.64
NR1I3-219ENST00000504010 IREB2P48200 963 aaKnown RBP11.03□□□□□ -0.64
NR1I3-219ENST00000504010 RGS3P49796 1198 aa11.03□□□□□ -0.64
NR1I3-219ENST00000504010 SLFNL1Q499Z3 407 aa11.03□□□□□ -0.64
NR1I3-219ENST00000504010 CENPQQ7L2Z9 268 aaPredicted RBP11.03□□□□□ -0.64
NR1I3-219ENST00000504010 KIAA0825Q8IV33 1275 aa11.03□□□□□ -0.64
NR1I3-219ENST00000504010 PIH1D3Q9NQM4 214 aaKnown RBP11.03□□□□□ -0.64
NR1I3-219ENST00000504010 GNL3LQ9NVN8 582 aaKnown RBP11.03□□□□□ -0.64
NR1I3-219ENST00000504010 ABCF2Q9UG63 623 aa11.03□□□□□ -0.64
NR1I3-219ENST00000504010 GOLIM4O00461 696 aa11.02□□□□□ -0.65
NR1I3-219ENST00000504010 CYP2E1P05181 493 aaPredicted RBP11.02□□□□□ -0.65
NR1I3-219ENST00000504010 CAPN2P17655 700 aa11.02□□□□□ -0.65
NR1I3-219ENST00000504010 MX1P20591 662 aa11.02□□□□□ -0.65
NR1I3-219ENST00000504010 PRDX5P30044 214 aa11.02□□□□□ -0.65
NR1I3-219ENST00000504010 KIF22Q14807 665 aa11.02□□□□□ -0.65
NR1I3-219ENST00000504010 MFSD14BQ5SR56 506 aa11.02□□□□□ -0.65
NR1I3-219ENST00000504010 PLEKHM2Q8IWE5 1019 aa11.02□□□□□ -0.65
NR1I3-219ENST00000504010 ANKRD13AQ8IZ07 590 aa11.02□□□□□ -0.65
NR1I3-219ENST00000504010 SPATA5Q8NB90 893 aa11.02□□□□□ -0.65
NR1I3-219ENST00000504010 ZBED3Q96IU2 234 aaPredicted RBP11.02□□□□□ -0.65
NR1I3-219ENST00000504010 CLMNQ96JQ2 1002 aa11.02□□□□□ -0.65
NR1I3-219ENST00000504010 PTPN18Q99952 460 aa11.02□□□□□ -0.65
NR1I3-219ENST00000504010 ZFYVE28Q9HCC9 887 aa11.02□□□□□ -0.65
NR1I3-219ENST00000504010 ECHDC1Q9NTX5 307 aa11.02□□□□□ -0.65
NR1I3-219ENST00000504010 SALL3Q9BXA9 1300 aa11.02□□□□□ -0.65
NR1I3-219ENST00000504010 ECM29Q5VYK3 1845 aa11.02□□□□□ -0.65
NR1I3-219ENST00000504010 UQCRFS1P1P0C7P4 283 aa11.01□□□□□ -0.65
NR1I3-219ENST00000504010 PDE1AP54750 535 aa11.01□□□□□ -0.65
NR1I3-219ENST00000504010 MTMR14Q8NCE2 650 aa11.01□□□□□ -0.65
NR1I3-219ENST00000504010 DENND2AQ9ULE3 1009 aa11.01□□□□□ -0.65
NR1I3-219ENST00000504010 AOX1Q06278 1338 aa11.01□□□□□ -0.65
NR1I3-219ENST00000504010 MYH13Q9UKX3 1938 aa11□□□□□ -0.65
NR1I3-219ENST00000504010 MYO1BO43795 1136 aa11□□□□□ -0.65
NR1I3-219ENST00000504010 CAP1Q01518 475 aa11□□□□□ -0.65
NR1I3-219ENST00000504010 DLGAP5Q15398 846 aa11□□□□□ -0.65
NR1I3-219ENST00000504010 DIXDC1Q155Q3 683 aa11□□□□□ -0.65
NR1I3-219ENST00000504010 ERICH6BQ5W0A0 696 aa11□□□□□ -0.65
NR1I3-219ENST00000504010 UBE2Q1Q7Z7E8 422 aa11□□□□□ -0.65
NR1I3-219ENST00000504010 PI4K2BQ8TCG2 481 aa11□□□□□ -0.65
NR1I3-219ENST00000504010 ZCCHC17Q9NP64 241 aaKnown RBP11□□□□□ -0.65
NR1I3-219ENST00000504010 RAI14Q9P0K7 980 aa11□□□□□ -0.65
NR1I3-219ENST00000504010 TTF2Q9UNY4 1162 aaKnown RBP11□□□□□ -0.65
NR1I3-219ENST00000504010 FAM205AQ6ZU69 1335 aa11□□□□□ -0.65
NR1I3-219ENST00000504010 SSC5DA1L4H1 1573 aa10.99□□□□□ -0.65
NR1I3-219ENST00000504010 SPDYE2BA6NHP3 402 aa10.99□□□□□ -0.65
NR1I3-219ENST00000504010 IDH1O75874 414 aaKnown RBP10.99□□□□□ -0.65
NR1I3-219ENST00000504010 SPDYE6P0CI01 402 aa10.99□□□□□ -0.65
NR1I3-219ENST00000504010 ATP5JP18859 108 aa10.99□□□□□ -0.65
NR1I3-219ENST00000504010 GJA5P36382 358 aa10.99□□□□□ -0.65
NR1I3-219ENST00000504010 GJA8P48165 433 aa10.99□□□□□ -0.65
NR1I3-219ENST00000504010 GTF2A2P52657 109 aa10.99□□□□□ -0.65
NR1I3-219ENST00000504010 RBM5P52756 815 aaKnown RBP eCLIP10.99□□□□□ -0.65
NR1I3-219ENST00000504010 TAF1CQ15572 869 aaPredicted RBP10.99□□□□□ -0.65
NR1I3-219ENST00000504010 SPDYE2Q495Y8 402 aa10.99□□□□□ -0.65
NR1I3-219ENST00000504010 SH3TC2Q8TF17 1288 aa10.99□□□□□ -0.65
NR1I3-219ENST00000504010 GPATCH3Q96I76 525 aa10.99□□□□□ -0.65
NR1I3-219ENST00000504010 MS4A4AQ96JQ5 239 aa10.99□□□□□ -0.65
NR1I3-219ENST00000504010 LRP2BPQ9P2M1 347 aa10.99□□□□□ -0.65
NR1I3-219ENST00000504010 MYO5AQ9Y4I1 1855 aaKnown RBP10.99□□□□□ -0.65
NR1I3-219ENST00000504010 SEMA3EO15041 775 aa10.98□□□□□ -0.65
NR1I3-219ENST00000504010 LDHBP07195 334 aaKnown RBP10.98□□□□□ -0.65
NR1I3-219ENST00000504010 GJB1P08034 283 aa10.98□□□□□ -0.65
NR1I3-219ENST00000504010 LACTBP83111 547 aaPredicted RBP10.98□□□□□ -0.65
NR1I3-219ENST00000504010 ERICH6Q7L0X2 663 aa10.98□□□□□ -0.65
NR1I3-219ENST00000504010 WDR66Q8TBY9 1149 aa10.98□□□□□ -0.65
NR1I3-219ENST00000504010 ZNF384Q8TF68 577 aa10.98□□□□□ -0.65
NR1I3-219ENST00000504010 RILPL2Q969X0 211 aa10.98□□□□□ -0.65
NR1I3-219ENST00000504010 OPTNQ96CV9 577 aa10.98□□□□□ -0.65
NR1I3-219ENST00000504010 SHISA4Q96DD7 197 aa10.98□□□□□ -0.65
NR1I3-219ENST00000504010 HAUS7Q99871 368 aa10.98□□□□□ -0.65
NR1I3-219ENST00000504010 PAG1Q9NWQ8 432 aa10.98□□□□□ -0.65
NR1I3-219ENST00000504010 FZD1Q9UP38 647 aa10.98□□□□□ -0.65
NR1I3-219ENST00000504010 STXBP5LQ9Y2K9 1186 aa10.98□□□□□ -0.65
NR1I3-219ENST00000504010 TRIM6-TRIM34B2RNG4 842 aa10.97□□□□□ -0.65
NR1I3-219ENST00000504010 TLR2O60603 784 aa10.97□□□□□ -0.65
NR1I3-219ENST00000504010 USP2O75604 605 aaPredicted RBP10.97□□□□□ -0.65
NR1I3-219ENST00000504010 MYCP01106 439 aaPredicted RBP10.97□□□□□ -0.65
NR1I3-219ENST00000504010 GSPT1P15170 499 aaKnown RBP10.97□□□□□ -0.65
NR1I3-219ENST00000504010 MECOMQ03112 1051 aa10.97□□□□□ -0.65
NR1I3-219ENST00000504010 CFAP100Q494V2 611 aa10.97□□□□□ -0.65
NR1I3-219ENST00000504010 DZIP1Q86YF9 867 aaKnown RBP10.97□□□□□ -0.65
NR1I3-219ENST00000504010 STAP2Q9UGK3 403 aa10.97□□□□□ -0.65
NR1I3-219ENST00000504010 SSUH2Q9Y2M2 353 aa10.97□□□□□ -0.65
NR1I3-219ENST00000504010 PRUNE2Q8WUY3 3088 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms