RNA–Protein interactions for RNA: ENST00000504000.1

SNF8-203, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 1,899 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-203ENST00000504000 COL5A2P05997 1499 aaPredicted RBP17.22■□□□□ 0.35
SNF8-203ENST00000504000 UBN2Q6ZU65 1347 aa17.22■□□□□ 0.35
SNF8-203ENST00000504000 SHANK3Q9BYB0 1731 aa17.22■□□□□ 0.35
SNF8-203ENST00000504000 ANKRD18BA2A2Z9 1011 aa17.22■□□□□ 0.35
SNF8-203ENST00000504000 PNOCQ13519 176 aa17.22■□□□□ 0.35
SNF8-203ENST00000504000 ERCC6LQ2NKX8 1250 aa17.22■□□□□ 0.35
SNF8-203ENST00000504000 LONRF3Q496Y0 759 aa17.22■□□□□ 0.35
SNF8-203ENST00000504000 PI16Q6UXB8 463 aa17.22■□□□□ 0.35
SNF8-203ENST00000504000 TOM1L2Q6ZVM7 507 aa17.22■□□□□ 0.35
SNF8-203ENST00000504000 NOSTRINQ8IVI9 506 aa17.22■□□□□ 0.35
SNF8-203ENST00000504000 MLKLQ8NB16 471 aa17.22■□□□□ 0.35
SNF8-203ENST00000504000 STRBPQ96SI9 672 aaKnown RBP17.22■□□□□ 0.35
SNF8-203ENST00000504000 ZNF446Q9NWS9 450 aa17.22■□□□□ 0.35
SNF8-203ENST00000504000 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.22■□□□□ 0.35
SNF8-203ENST00000504000 DNAI1Q9UI46 699 aa17.22■□□□□ 0.35
SNF8-203ENST00000504000 V9GYY5 206 aaPredicted RBP17.22■□□□□ 0.35
SNF8-203ENST00000504000 EFCAB8A8MWE9 144 aa17.21■□□□□ 0.35
SNF8-203ENST00000504000 PATL2C9JE40 543 aaKnown RBP17.21■□□□□ 0.35
SNF8-203ENST00000504000 STX10O60499 249 aa17.21■□□□□ 0.35
SNF8-203ENST00000504000 PDE8BO95263 885 aa17.21■□□□□ 0.35
SNF8-203ENST00000504000 ITGA6P23229 1130 aa17.21■□□□□ 0.35
SNF8-203ENST00000504000 SSRP1Q08945 709 aaKnown RBP17.21■□□□□ 0.35
SNF8-203ENST00000504000 KANK3Q6NY19 840 aa17.21■□□□□ 0.35
SNF8-203ENST00000504000 ZNF771Q7L3S4 317 aaPredicted RBP17.21■□□□□ 0.35
SNF8-203ENST00000504000 TMEM139Q8IV31 216 aa17.21■□□□□ 0.35
SNF8-203ENST00000504000 FOXP4Q8IVH2 680 aaPredicted RBP17.21■□□□□ 0.35
SNF8-203ENST00000504000 ENOX1Q8TC92 643 aaKnown RBP17.21■□□□□ 0.35
SNF8-203ENST00000504000 AIFM3Q96NN9 605 aa17.21■□□□□ 0.35
SNF8-203ENST00000504000 FOXP1Q9H334 677 aaPredicted RBP17.21■□□□□ 0.35
SNF8-203ENST00000504000 ARGLU1Q9NWB6 273 aaPredicted RBP17.21■□□□□ 0.35
SNF8-203ENST00000504000 PCDHA5Q9Y5H7 936 aa17.21■□□□□ 0.35
SNF8-203ENST00000504000 ZNF532Q9HCE3 1301 aa17.21■□□□□ 0.35
SNF8-203ENST00000504000 TIAM2Q8IVF5 1701 aa17.2■□□□□ 0.34
SNF8-203ENST00000504000 GOLGA8AA7E2F4 631 aa17.2■□□□□ 0.34
SNF8-203ENST00000504000 RANBP6O60518 1105 aaKnown RBP17.2■□□□□ 0.34
SNF8-203ENST00000504000 PDE6AP16499 860 aa17.2■□□□□ 0.34
SNF8-203ENST00000504000 SARSP49591 514 aaKnown RBP17.2■□□□□ 0.34
SNF8-203ENST00000504000 RILPL1Q5EBL4 403 aa17.2■□□□□ 0.34
SNF8-203ENST00000504000 RAB11FIP4Q86YS3 637 aa17.2■□□□□ 0.34
SNF8-203ENST00000504000 UBXN4Q92575 508 aa17.2■□□□□ 0.34
SNF8-203ENST00000504000 DPF2Q92785 391 aa17.2■□□□□ 0.34
SNF8-203ENST00000504000 FANCLQ9NW38 375 aa17.2■□□□□ 0.34
SNF8-203ENST00000504000 ECM29Q5VYK3 1845 aa17.2■□□□□ 0.34
SNF8-203ENST00000504000 B4E1Z4 1266 aa17.2■□□□□ 0.34
SNF8-203ENST00000504000 STARD3NLO95772 234 aa17.2■□□□□ 0.34
SNF8-203ENST00000504000 ZNF18P17022 549 aa17.2■□□□□ 0.34
SNF8-203ENST00000504000 PTPREP23469 700 aa17.2■□□□□ 0.34
SNF8-203ENST00000504000 CTSWP56202 376 aa17.2■□□□□ 0.34
SNF8-203ENST00000504000 SAFBQ15424 915 aaKnown RBP eCLIP17.2■□□□□ 0.34
SNF8-203ENST00000504000 TMEM67Q5HYA8 995 aa17.2■□□□□ 0.34
SNF8-203ENST00000504000 NLRP10Q86W26 655 aa17.2■□□□□ 0.34
SNF8-203ENST00000504000 PHKBQ93100 1093 aa17.2■□□□□ 0.34
SNF8-203ENST00000504000 KRT23Q9C075 422 aa17.2■□□□□ 0.34
SNF8-203ENST00000504000 PIH1D3Q9NQM4 214 aaKnown RBP17.2■□□□□ 0.34
SNF8-203ENST00000504000 SLC12A7Q9Y666 1083 aa17.2■□□□□ 0.34
SNF8-203ENST00000504000 MMP1P03956 469 aa17.19■□□□□ 0.34
SNF8-203ENST00000504000 APPP05067 770 aa17.19■□□□□ 0.34
SNF8-203ENST00000504000 MICU3Q86XE3 530 aa17.19■□□□□ 0.34
SNF8-203ENST00000504000 CLIC6Q96NY7 704 aa17.19■□□□□ 0.34
SNF8-203ENST00000504000 UTP14AQ9BVJ6 771 aaKnown RBP17.19■□□□□ 0.34
SNF8-203ENST00000504000 CNNM1Q9NRU3 951 aa17.19■□□□□ 0.34
SNF8-203ENST00000504000 TADA3O75528 432 aa17.18■□□□□ 0.34
SNF8-203ENST00000504000 ZRANB2O95218 330 aaKnown RBP eCLIP17.18■□□□□ 0.34
SNF8-203ENST00000504000 CLCN6P51797 869 aa17.18■□□□□ 0.34
SNF8-203ENST00000504000 NFXL1Q6ZNB6 911 aa17.18■□□□□ 0.34
SNF8-203ENST00000504000 TMTC2Q8N394 836 aa17.18■□□□□ 0.34
SNF8-203ENST00000504000 SPATA20Q8TB22 786 aa17.18■□□□□ 0.34
SNF8-203ENST00000504000 LPIN2Q92539 896 aa17.18■□□□□ 0.34
SNF8-203ENST00000504000 AIDAQ96BJ3 306 aa17.18■□□□□ 0.34
SNF8-203ENST00000504000 AK7Q96M32 723 aa17.18■□□□□ 0.34
SNF8-203ENST00000504000 GREM2Q9H772 168 aa17.18■□□□□ 0.34
SNF8-203ENST00000504000 PRDM11Q9NQV5 511 aa17.18■□□□□ 0.34
SNF8-203ENST00000504000 TMOD3Q9NYL9 352 aa17.18■□□□□ 0.34
SNF8-203ENST00000504000 DENND2AQ9ULE3 1009 aa17.18■□□□□ 0.34
SNF8-203ENST00000504000 FHOD1Q9Y613 1164 aa17.18■□□□□ 0.34
SNF8-203ENST00000504000 PARP3Q9Y6F1 533 aa17.18■□□□□ 0.34
SNF8-203ENST00000504000 LRP5O75197 1615 aa17.18■□□□□ 0.34
SNF8-203ENST00000504000 ARAP2Q8WZ64 1704 aa17.18■□□□□ 0.34
SNF8-203ENST00000504000 CCDC196A0A1B0GTZ2 297 aa17.18■□□□□ 0.34
SNF8-203ENST00000504000 IDH1O75874 414 aaKnown RBP17.18■□□□□ 0.34
SNF8-203ENST00000504000 FGFR2P21802 821 aa17.18■□□□□ 0.34
SNF8-203ENST00000504000 BMP6P22004 513 aa17.18■□□□□ 0.34
SNF8-203ENST00000504000 POSTNQ15063 836 aa17.18■□□□□ 0.34
SNF8-203ENST00000504000 PPP2R5BQ15173 497 aa17.18■□□□□ 0.34
SNF8-203ENST00000504000 ARHGAP29Q52LW3 1261 aa17.18■□□□□ 0.34
SNF8-203ENST00000504000 ISM2Q6H9L7 571 aa17.18■□□□□ 0.34
SNF8-203ENST00000504000 IFNL3Q8IZI9 196 aa17.18■□□□□ 0.34
SNF8-203ENST00000504000 STK11IPQ8N1F8 1099 aa17.18■□□□□ 0.34
SNF8-203ENST00000504000 NKX2-3Q8TAU0 364 aa17.18■□□□□ 0.34
SNF8-203ENST00000504000 INTS13Q9NVM9 706 aa17.18■□□□□ 0.34
SNF8-203ENST00000504000 ZSWIM5Q9P217 1185 aa17.18■□□□□ 0.34
SNF8-203ENST00000504000 FBXO2Q9UK22 296 aaPredicted RBP17.18■□□□□ 0.34
SNF8-203ENST00000504000 PPP2R2CQ9Y2T4 447 aa17.18■□□□□ 0.34
SNF8-203ENST00000504000 MYH3P11055 1940 aa17.17■□□□□ 0.34
SNF8-203ENST00000504000 VWA3AA6NCI4 1184 aa17.17■□□□□ 0.34
SNF8-203ENST00000504000 GNAT2P19087 354 aa17.17■□□□□ 0.34
SNF8-203ENST00000504000 ERCC5P28715 1186 aaPredicted RBP17.17■□□□□ 0.34
SNF8-203ENST00000504000 MORC3Q14149 939 aa17.17■□□□□ 0.34
SNF8-203ENST00000504000 PUM3Q15397 648 aaKnown RBP17.17■□□□□ 0.34
SNF8-203ENST00000504000 SPECC1LQ69YQ0 1117 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms