RNA–Protein interactions for RNA: ENST00000503974.5

PDLIM5-207, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 2,081 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-207ENST00000503974 TPM1P09493 284 aa11.14□□□□□ -0.63
PDLIM5-207ENST00000503974 KMT5BQ4FZB7 885 aa11.14□□□□□ -0.63
PDLIM5-207ENST00000503974 CCDC93Q567U6 631 aa11.14□□□□□ -0.63
PDLIM5-207ENST00000503974 C17orf53Q8N3J3 647 aaPredicted RBP11.14□□□□□ -0.63
PDLIM5-207ENST00000503974 ACRBPQ8NEB7 543 aa11.14□□□□□ -0.63
PDLIM5-207ENST00000503974 CCDC26Q8TAB7 109 aa11.14□□□□□ -0.63
PDLIM5-207ENST00000503974 PPM1EQ8WY54 764 aa11.14□□□□□ -0.63
PDLIM5-207ENST00000503974 RTFDC1Q9BY42 306 aaPredicted RBP11.14□□□□□ -0.63
PDLIM5-207ENST00000503974 ANKRD2Q9GZV1 360 aa11.14□□□□□ -0.63
PDLIM5-207ENST00000503974 SIL1Q9H173 461 aa11.14□□□□□ -0.63
PDLIM5-207ENST00000503974 RWDD1Q9H446 243 aaPredicted RBP11.14□□□□□ -0.63
PDLIM5-207ENST00000503974 BCS1LQ9Y276 419 aa11.14□□□□□ -0.63
PDLIM5-207ENST00000503974 EXOC6BQ9Y2D4 811 aa11.14□□□□□ -0.63
PDLIM5-207ENST00000503974 LTBP3Q9NS15 1303 aa11.14□□□□□ -0.63
PDLIM5-207ENST00000503974 RAB11FIP3O75154 756 aa11.13□□□□□ -0.63
PDLIM5-207ENST00000503974 EIF3JO75822 258 aaKnown RBP11.13□□□□□ -0.63
PDLIM5-207ENST00000503974 SMC2O95347 1197 aa11.13□□□□□ -0.63
PDLIM5-207ENST00000503974 GPSM2P81274 684 aa11.13□□□□□ -0.63
PDLIM5-207ENST00000503974 G3BP1Q13283 466 aaKnown RBP eCLIP11.13□□□□□ -0.638e-6■□□□□ 9
PDLIM5-207ENST00000503974 WWC2Q6AWC2 1192 aa11.13□□□□□ -0.63
PDLIM5-207ENST00000503974 OLFM4Q6UX06 510 aa11.13□□□□□ -0.63
PDLIM5-207ENST00000503974 ERC1Q8IUD2 1116 aa11.13□□□□□ -0.63
PDLIM5-207ENST00000503974 GCC1Q96CN9 775 aa11.13□□□□□ -0.63
PDLIM5-207ENST00000503974 IRS2Q9Y4H2 1338 aa11.13□□□□□ -0.63
PDLIM5-207ENST00000503974 ZNF609O15014 1411 aa11.13□□□□□ -0.63
PDLIM5-207ENST00000503974 CCP110O43303 1012 aa11.13□□□□□ -0.63
PDLIM5-207ENST00000503974 PDE8BO95263 885 aa11.13□□□□□ -0.63
PDLIM5-207ENST00000503974 YBX3P16989 372 aaKnown RBP eCLIP11.13□□□□□ -0.636e-7■■□□□ 12.3
PDLIM5-207ENST00000503974 TBC1D8BQ0IIM8 1120 aa11.13□□□□□ -0.63
PDLIM5-207ENST00000503974 GOLGA5Q8TBA6 731 aa11.13□□□□□ -0.63
PDLIM5-207ENST00000503974 GPR108Q9NPR9 543 aa11.13□□□□□ -0.63
PDLIM5-207ENST00000503974 PCDHGA4Q9Y5G9 962 aa11.13□□□□□ -0.63
PDLIM5-207ENST00000503974 NEBLO76041 1014 aa11.12□□□□□ -0.63
PDLIM5-207ENST00000503974 MYBL2P10244 700 aa11.12□□□□□ -0.63
PDLIM5-207ENST00000503974 FGFR2P21802 821 aa11.12□□□□□ -0.63
PDLIM5-207ENST00000503974 RWDD2BP57060 319 aa11.12□□□□□ -0.63
PDLIM5-207ENST00000503974 TBC1D25Q3MII6 688 aa11.12□□□□□ -0.63
PDLIM5-207ENST00000503974 METTL24Q5JXM2 366 aa11.12□□□□□ -0.63
PDLIM5-207ENST00000503974 RTKN2Q8IZC4 609 aa11.12□□□□□ -0.63
PDLIM5-207ENST00000503974 THOC1Q96FV9 657 aaKnown RBP11.12□□□□□ -0.63
PDLIM5-207ENST00000503974 CPSF2Q9P2I0 782 aaKnown RBP11.12□□□□□ -0.63
PDLIM5-207ENST00000503974 LEMD3Q9Y2U8 911 aa11.12□□□□□ -0.63
PDLIM5-207ENST00000503974 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.12□□□□□ -0.63
PDLIM5-207ENST00000503974 NFKBIEO00221 500 aa11.12□□□□□ -0.63
PDLIM5-207ENST00000503974 PAX3P23760 479 aa11.12□□□□□ -0.63
PDLIM5-207ENST00000503974 TFCP2Q12800 502 aa11.12□□□□□ -0.63
PDLIM5-207ENST00000503974 GRIK3Q13003 919 aa11.12□□□□□ -0.63
PDLIM5-207ENST00000503974 UBE4AQ14139 1066 aa11.12□□□□□ -0.63
PDLIM5-207ENST00000503974 SLFNL1Q499Z3 407 aa11.12□□□□□ -0.63
PDLIM5-207ENST00000503974 C15orf52Q6ZUT6 534 aaKnown RBP11.12□□□□□ -0.63
PDLIM5-207ENST00000503974 FMNL3Q8IVF7 1028 aa11.12□□□□□ -0.63
PDLIM5-207ENST00000503974 MICALL1Q8N3F8 863 aa11.12□□□□□ -0.63
PDLIM5-207ENST00000503974 PRPF38AQ8NAV1 312 aaKnown RBP11.12□□□□□ -0.63
PDLIM5-207ENST00000503974 TBC1D16Q8TBP0 767 aa11.12□□□□□ -0.63
PDLIM5-207ENST00000503974 RHPN1Q8TCX5 695 aa11.12□□□□□ -0.63
PDLIM5-207ENST00000503974 STAG1Q8WVM7 1258 aa11.12□□□□□ -0.63
PDLIM5-207ENST00000503974 SNX21Q969T3 373 aa11.12□□□□□ -0.63
PDLIM5-207ENST00000503974 SH3GL3Q99963 347 aa11.12□□□□□ -0.63
PDLIM5-207ENST00000503974 SLX1AQ9BQ83 275 aa11.12□□□□□ -0.63
PDLIM5-207ENST00000503974 TMX4Q9H1E5 349 aaPredicted RBP11.12□□□□□ -0.63
PDLIM5-207ENST00000503974 MED23Q9ULK4 1368 aa11.11□□□□□ -0.63
PDLIM5-207ENST00000503974 SMTNL1A8MU46 457 aa11.11□□□□□ -0.63
PDLIM5-207ENST00000503974 TPD52L2O43399 206 aaKnown RBP11.11□□□□□ -0.63
PDLIM5-207ENST00000503974 SETSIPP0DME0 302 aa11.11□□□□□ -0.63
PDLIM5-207ENST00000503974 ATP2B4P23634 1241 aa11.11□□□□□ -0.63
PDLIM5-207ENST00000503974 FKBP4Q02790 459 aaKnown RBP eCLIP11.11□□□□□ -0.63
PDLIM5-207ENST00000503974 PSMD2Q13200 908 aa11.11□□□□□ -0.63
PDLIM5-207ENST00000503974 LRSAM1Q6UWE0 723 aa11.11□□□□□ -0.63
PDLIM5-207ENST00000503974 ZNF396Q96N95 335 aaPredicted RBP11.11□□□□□ -0.63
PDLIM5-207ENST00000503974 CEP126Q9P2H0 1117 aa11.11□□□□□ -0.63
PDLIM5-207ENST00000503974 WWC3Q9ULE0 1092 aa11.11□□□□□ -0.63
PDLIM5-207ENST00000503974 NSFL1CQ9UNZ2 370 aaKnown RBP11.11□□□□□ -0.63
PDLIM5-207ENST00000503974 SBF1O95248 1867 aa11.11□□□□□ -0.63
PDLIM5-207ENST00000503974 ZNF804BA4D1E1 1349 aa11.1□□□□□ -0.63
PDLIM5-207ENST00000503974 TAF5LO75529 589 aa11.1□□□□□ -0.63
PDLIM5-207ENST00000503974 PUM3Q15397 648 aaKnown RBP11.1□□□□□ -0.63
PDLIM5-207ENST00000503974 DPP8Q6V1X1 898 aaPredicted RBP11.1□□□□□ -0.63
PDLIM5-207ENST00000503974 HSCBQ8IWL3 235 aa11.1□□□□□ -0.63
PDLIM5-207ENST00000503974 HELBQ8NG08 1087 aaPredicted RBP11.1□□□□□ -0.63
PDLIM5-207ENST00000503974 KIAA1524Q8TCG1 905 aa11.1□□□□□ -0.63
PDLIM5-207ENST00000503974 VPS33BQ9H267 617 aa11.1□□□□□ -0.63
PDLIM5-207ENST00000503974 ANKIB1Q9P2G1 1089 aa11.1□□□□□ -0.63
PDLIM5-207ENST00000503974 ZNF219Q9P2Y4 722 aaPredicted RBP11.1□□□□□ -0.63
PDLIM5-207ENST00000503974 POLLQ9UGP5 575 aa11.1□□□□□ -0.63
PDLIM5-207ENST00000503974 GGA1Q9UJY5 639 aa11.1□□□□□ -0.63
PDLIM5-207ENST00000503974 DICER1Q9UPY3 1922 aaKnown RBP11.1□□□□□ -0.63
PDLIM5-207ENST00000503974 NUCB2P80303 420 aa11.1□□□□□ -0.63
PDLIM5-207ENST00000503974 SLC5A9Q2M3M2 681 aa11.1□□□□□ -0.63
PDLIM5-207ENST00000503974 NME8Q8N427 588 aa11.1□□□□□ -0.63
PDLIM5-207ENST00000503974 SUPT20HQ8NEM7 779 aa11.1□□□□□ -0.63
PDLIM5-207ENST00000503974 LPIN2Q92539 896 aa11.1□□□□□ -0.63
PDLIM5-207ENST00000503974 LRRCC1Q9C099 1032 aa11.1□□□□□ -0.63
PDLIM5-207ENST00000503974 UFL1O94874 794 aa11.09□□□□□ -0.63
PDLIM5-207ENST00000503974 GPS2Q13227 327 aa11.09□□□□□ -0.63
PDLIM5-207ENST00000503974 TNNI3KQ59H18 835 aa11.09□□□□□ -0.63
PDLIM5-207ENST00000503974 CAVIN1Q6NZI2 390 aaKnown RBP11.09□□□□□ -0.63
PDLIM5-207ENST00000503974 CCDC186Q7Z3E2 898 aa11.09□□□□□ -0.63
PDLIM5-207ENST00000503974 TAOK3Q9H2K8 898 aa11.09□□□□□ -0.63
PDLIM5-207ENST00000503974 VEZTQ9HBM0 779 aa11.09□□□□□ -0.63
PDLIM5-207ENST00000503974 SLC24A3Q9HC58 644 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms