RNA–Protein interactions for RNA: ENST00000503659.5

RNF4-204, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 558 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-204ENST00000503659 CYP2E1P05181 493 aaPredicted RBP22.42■■□□□ 1.18
RNF4-204ENST00000503659 PDE3AQ14432 1141 aa22.42■■□□□ 1.18
RNF4-204ENST00000503659 SH3BP5LQ7L8J4 393 aa22.42■■□□□ 1.18
RNF4-204ENST00000503659 ERC1Q8IUD2 1116 aa22.42■■□□□ 1.18
RNF4-204ENST00000503659 OTUD5Q96G74 571 aa22.42■■□□□ 1.18
RNF4-204ENST00000503659 PTPN18Q99952 460 aa22.42■■□□□ 1.18
RNF4-204ENST00000503659 HPS5Q9UPZ3 1129 aa22.42■■□□□ 1.18
RNF4-204ENST00000503659 INPP5BP32019 993 aa22.41■■□□□ 1.18
RNF4-204ENST00000503659 GTF2A2P52657 109 aa22.41■■□□□ 1.18
RNF4-204ENST00000503659 GSTO1P78417 241 aa22.41■■□□□ 1.18
RNF4-204ENST00000503659 FBXO46Q6PJ61 603 aaPredicted RBP22.41■■□□□ 1.18
RNF4-204ENST00000503659 LRP2BPQ9P2M1 347 aa22.41■■□□□ 1.18
RNF4-204ENST00000503659 ZNF112Q9UJU3 913 aa22.41■■□□□ 1.18
RNF4-204ENST00000503659 ZAP70P43403 619 aa22.4■■□□□ 1.18
RNF4-204ENST00000503659 RHPN1Q8TCX5 695 aa22.4■■□□□ 1.18
RNF4-204ENST00000503659 LDHCP07864 332 aa22.39■■□□□ 1.17
RNF4-204ENST00000503659 PICALMQ13492 652 aa22.39■■□□□ 1.17
RNF4-204ENST00000503659 AACSQ86V21 672 aa22.39■■□□□ 1.17
RNF4-204ENST00000503659 ERO1BQ86YB8 467 aa22.39■■□□□ 1.17
RNF4-204ENST00000503659 BRI3BPQ8WY22 251 aa22.39■■□□□ 1.17
RNF4-204ENST00000503659 IL1RAPL2Q9NP60 686 aa22.39■■□□□ 1.17
RNF4-204ENST00000503659 PIH1D3Q9NQM4 214 aaKnown RBP22.39■■□□□ 1.17
RNF4-204ENST00000503659 DOCK1Q14185 1865 aa22.39■■□□□ 1.17
RNF4-204ENST00000503659 SIPA1L1O43166 1804 aa22.38■■□□□ 1.17
RNF4-204ENST00000503659 DDTLA6NHG4 134 aaPredicted RBP22.38■■□□□ 1.17
RNF4-204ENST00000503659 HMMRO75330 724 aa22.38■■□□□ 1.17
RNF4-204ENST00000503659 CRHR2Q13324 411 aa22.38■■□□□ 1.17
RNF4-204ENST00000503659 HSP90AB4PQ58FF6 505 aa22.38■■□□□ 1.17
RNF4-204ENST00000503659 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.38■■□□□ 1.17
RNF4-204ENST00000503659 CHMP4BQ9H444 224 aaKnown RBP22.38■■□□□ 1.17
RNF4-204ENST00000503659 COL2A1P02458 1487 aaPredicted RBP22.37■■□□□ 1.17
RNF4-204ENST00000503659 PHIPQ8WWQ0 1821 aa22.37■■□□□ 1.17
RNF4-204ENST00000503659 ADGRA1Q86SQ6 560 aa22.37■■□□□ 1.17
RNF4-204ENST00000503659 ERO1AQ96HE7 468 aa22.37■■□□□ 1.17
RNF4-204ENST00000503659 CCL15-CCL14A0A0B4J2E2 113 aa22.36■■□□□ 1.17
RNF4-204ENST00000503659 PHF20L1A8MW92 1017 aa22.36■■□□□ 1.17
RNF4-204ENST00000503659 IRF6O14896 467 aa22.36■■□□□ 1.17
RNF4-204ENST00000503659 NPM3O75607 178 aaKnown RBP22.36■■□□□ 1.17
RNF4-204ENST00000503659 MAP4K4O95819 1239 aaPredicted RBP22.36■■□□□ 1.17
RNF4-204ENST00000503659 SLURP2P0DP57 97 aa22.36■■□□□ 1.17
RNF4-204ENST00000503659 PPIL2Q13356 520 aa22.36■■□□□ 1.17
RNF4-204ENST00000503659 CCL15Q16663 113 aa22.36■■□□□ 1.17
RNF4-204ENST00000503659 NOL9Q5SY16 702 aaKnown RBP22.36■■□□□ 1.17
RNF4-204ENST00000503659 NAA16Q6N069 864 aaPredicted RBP22.36■■□□□ 1.17
RNF4-204ENST00000503659 ZSCAN29Q8IWY8 852 aaPredicted RBP22.36■■□□□ 1.17
RNF4-204ENST00000503659 NDUFB9Q9Y6M9 179 aa22.36■■□□□ 1.17
RNF4-204ENST00000503659 APBB1O00213 710 aa22.35■■□□□ 1.17
RNF4-204ENST00000503659 CETPP11597 493 aa22.35■■□□□ 1.17
RNF4-204ENST00000503659 MAP3K10Q02779 954 aa22.35■■□□□ 1.17
RNF4-204ENST00000503659 SH3RF3Q8TEJ3 882 aaPredicted RBP22.35■■□□□ 1.17
RNF4-204ENST00000503659 KIF1BPQ96EK5 621 aa22.35■■□□□ 1.17
RNF4-204ENST00000503659 ZCCHC17Q9NP64 241 aaKnown RBP22.35■■□□□ 1.17
RNF4-204ENST00000503659 ATAD5Q96QE3 1844 aa22.35■■□□□ 1.17
RNF4-204ENST00000503659 PTPRFP10586 1907 aa22.35■■□□□ 1.17
RNF4-204ENST00000503659 PPATQ06203 517 aa22.34■■□□□ 1.17
RNF4-204ENST00000503659 ZFYVE28Q9HCC9 887 aa22.34■■□□□ 1.17
RNF4-204ENST00000503659 AATFQ9NY61 560 aaKnown RBP eCLIP22.34■■□□□ 1.17
RNF4-204ENST00000503659 IGSF3O75054 1194 aa22.33■■□□□ 1.17
RNF4-204ENST00000503659 SOX10P56693 466 aa22.33■■□□□ 1.17
RNF4-204ENST00000503659 SP3Q02447 781 aa22.33■■□□□ 1.17
RNF4-204ENST00000503659 SNAPC2Q13487 334 aa22.33■■□□□ 1.17
RNF4-204ENST00000503659 TEX11Q8IYF3 940 aa22.33■■□□□ 1.17
RNF4-204ENST00000503659 FAM43AQ8N2R8 423 aa22.33■■□□□ 1.17
RNF4-204ENST00000503659 OSBPL5Q9H0X9 879 aaPredicted RBP22.33■■□□□ 1.17
RNF4-204ENST00000503659 ANTXR1Q9H6X2 564 aa22.33■■□□□ 1.17
RNF4-204ENST00000503659 TRIM17Q9Y577 477 aa22.33■■□□□ 1.17
RNF4-204ENST00000503659 RAB11FIP3O75154 756 aa22.32■■□□□ 1.16
RNF4-204ENST00000503659 PPP4CP60510 307 aa22.32■■□□□ 1.16
RNF4-204ENST00000503659 TAF1CQ15572 869 aaPredicted RBP22.32■■□□□ 1.16
RNF4-204ENST00000503659 OTOP1Q7RTM1 612 aa22.32■■□□□ 1.16
RNF4-204ENST00000503659 CLASRPQ8N2M8 674 aaKnown RBP22.32■■□□□ 1.16
RNF4-204ENST00000503659 ARHGEF6Q15052 776 aa22.31■■□□□ 1.16
RNF4-204ENST00000503659 SCYL3Q8IZE3 742 aa22.31■■□□□ 1.16
RNF4-204ENST00000503659 NOL10Q9BSC4 688 aaKnown RBP22.31■■□□□ 1.16
RNF4-204ENST00000503659 KCNH4Q9UQ05 1017 aa22.31■■□□□ 1.16
RNF4-204ENST00000503659 HTTP42858 3142 aa22.31■■□□□ 1.16
RNF4-204ENST00000503659 FAM196BA6NMK8 535 aa22.3■■□□□ 1.16
RNF4-204ENST00000503659 BTBD19C9JJ37 291 aa22.3■■□□□ 1.16
RNF4-204ENST00000503659 IDH1O75874 414 aaKnown RBP22.3■■□□□ 1.16
RNF4-204ENST00000503659 BAG3O95817 575 aa22.3■■□□□ 1.16
RNF4-204ENST00000503659 PDE4DIPQ5VU43 2346 aa22.3■■□□□ 1.16
RNF4-204ENST00000503659 MYH1P12882 1939 aa22.29■■□□□ 1.16
RNF4-204ENST00000503659 TBC1D12O60347 775 aa22.29■■□□□ 1.16
RNF4-204ENST00000503659 CD99L2Q8TCZ2 262 aa22.29■■□□□ 1.16
RNF4-204ENST00000503659 EFCC1Q9HA90 598 aa22.29■■□□□ 1.16
RNF4-204ENST00000503659 FLT1P17948 1338 aa22.29■■□□□ 1.16
RNF4-204ENST00000503659 DDX60LQ5H9U9 1706 aaKnown RBP22.28■■□□□ 1.16
RNF4-204ENST00000503659 IFIT2P09913 472 aaKnown RBP22.28■■□□□ 1.16
RNF4-204ENST00000503659 PLCG2P16885 1265 aa22.28■■□□□ 1.16
RNF4-204ENST00000503659 CYP7A1P22680 504 aa22.28■■□□□ 1.16
RNF4-204ENST00000503659 MOGSQ13724 837 aa22.28■■□□□ 1.16
RNF4-204ENST00000503659 MAGEB6Q8N7X4 407 aa22.28■■□□□ 1.16
RNF4-204ENST00000503659 PTPN22Q9Y2R2 807 aa22.28■■□□□ 1.16
RNF4-204ENST00000503659 ZSWIM8A7E2V4 1837 aa22.28■■□□□ 1.16
RNF4-204ENST00000503659 TNRC18O15417 2968 aaPredicted RBP22.28■■□□□ 1.16
RNF4-204ENST00000503659 PTPRAP18433 802 aa22.27■■□□□ 1.16
RNF4-204ENST00000503659 DYNLL1P63167 89 aaKnown RBP22.27■■□□□ 1.16
RNF4-204ENST00000503659 CAP1Q01518 475 aa22.27■■□□□ 1.16
RNF4-204ENST00000503659 PPIL4Q8WUA2 492 aaKnown RBP eCLIP22.27■■□□□ 1.16
RNF4-204ENST00000503659 TGFBRAP1Q8WUH2 860 aa22.27■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms