RNA–Protein interactions for RNA: ENST00000498540.2

TRAF4-212, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 748 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-212ENST00000498540 ZHX2Q9Y6X8 837 aa18.34■□□□□ 0.53
TRAF4-212ENST00000498540 CIAO1O76071 339 aa18.33■□□□□ 0.52
TRAF4-212ENST00000498540 PTPRAP18433 802 aa18.33■□□□□ 0.52
TRAF4-212ENST00000498540 U2AF1L4Q8WU68 220 aaKnown RBP18.33■□□□□ 0.52
TRAF4-212ENST00000498540 HTATIP2Q9BUP3 242 aa18.33■□□□□ 0.52
TRAF4-212ENST00000498540 IDI2Q9BXS1 227 aa18.33■□□□□ 0.52
TRAF4-212ENST00000498540 PRO3102Q9H379 93 aa18.33■□□□□ 0.52
TRAF4-212ENST00000498540 PICK1Q9NRD5 415 aa18.33■□□□□ 0.52
TRAF4-212ENST00000498540 GNL3LQ9NVN8 582 aaKnown RBP18.33■□□□□ 0.52
TRAF4-212ENST00000498540 DENND2AQ9ULE3 1009 aa18.33■□□□□ 0.52
TRAF4-212ENST00000498540 AFG3L2Q9Y4W6 797 aa18.33■□□□□ 0.52
TRAF4-212ENST00000498540 GAKO14976 1311 aa18.32■□□□□ 0.52
TRAF4-212ENST00000498540 FARP2O94887 1054 aaPredicted RBP18.32■□□□□ 0.52
TRAF4-212ENST00000498540 ADORA1P30542 326 aa18.32■□□□□ 0.52
TRAF4-212ENST00000498540 GADL1Q6ZQY3 521 aa18.32■□□□□ 0.52
TRAF4-212ENST00000498540 FASTKD5Q7L8L6 764 aaKnown RBP18.32■□□□□ 0.52
TRAF4-212ENST00000498540 CEP126Q9P2H0 1117 aa18.32■□□□□ 0.52
TRAF4-212ENST00000498540 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.32■□□□□ 0.52
TRAF4-212ENST00000498540 DDTLA6NHG4 134 aaPredicted RBP18.31■□□□□ 0.52
TRAF4-212ENST00000498540 SEMA3EO15041 775 aa18.31■□□□□ 0.52
TRAF4-212ENST00000498540 ADCY3O60266 1144 aa18.31■□□□□ 0.52
TRAF4-212ENST00000498540 ENTPD3O75355 529 aa18.31■□□□□ 0.52
TRAF4-212ENST00000498540 ELNP15502 786 aa18.31■□□□□ 0.52
TRAF4-212ENST00000498540 FLT3LGP49771 235 aa18.31■□□□□ 0.52
TRAF4-212ENST00000498540 DDX4Q9NQI0 724 aaKnown RBP18.31■□□□□ 0.52
TRAF4-212ENST00000498540 FBXO3Q9UK99 471 aa18.31■□□□□ 0.52
TRAF4-212ENST00000498540 PA2G4Q9UQ80 394 aaKnown RBP18.31■□□□□ 0.52
TRAF4-212ENST00000498540 DOCK3Q8IZD9 2030 aa18.3■□□□□ 0.52
TRAF4-212ENST00000498540 ALPK3Q96L96 1907 aa18.3■□□□□ 0.52
TRAF4-212ENST00000498540 E9PSI1 815 aa18.3■□□□□ 0.52
TRAF4-212ENST00000498540 SGPL1O95470 568 aa18.3■□□□□ 0.52
TRAF4-212ENST00000498540 UBTFL1P0CB47 393 aaPredicted RBP18.3■□□□□ 0.52
TRAF4-212ENST00000498540 CCDC84Q86UT8 332 aaPredicted RBP18.3■□□□□ 0.52
TRAF4-212ENST00000498540 ZSCAN29Q8IWY8 852 aaPredicted RBP18.3■□□□□ 0.52
TRAF4-212ENST00000498540 TRIM75PA6NK02 468 aa18.29■□□□□ 0.52
TRAF4-212ENST00000498540 ZBTB7BO15156 539 aaPredicted RBP18.29■□□□□ 0.52
TRAF4-212ENST00000498540 INHAP05111 366 aa18.29■□□□□ 0.52
TRAF4-212ENST00000498540 MAP3K10Q02779 954 aa18.29■□□□□ 0.52
TRAF4-212ENST00000498540 RASGRF1Q13972 1273 aa18.29■□□□□ 0.52
TRAF4-212ENST00000498540 CCDC102BQ68D86 513 aa18.29■□□□□ 0.52
TRAF4-212ENST00000498540 DZIP1Q86YF9 867 aaKnown RBP18.29■□□□□ 0.52
TRAF4-212ENST00000498540 SLC45A1Q9Y2W3 748 aa18.29■□□□□ 0.52
TRAF4-212ENST00000498540 LRRFIP2Q9Y608 721 aaKnown RBP18.29■□□□□ 0.52
TRAF4-212ENST00000498540 LOC285556D6RIA3 1793 aa18.28■□□□□ 0.52
TRAF4-212ENST00000498540 TNPO2O14787 897 aaKnown RBP18.28■□□□□ 0.52
TRAF4-212ENST00000498540 IL15P40933 162 aaPredicted RBP18.28■□□□□ 0.52
TRAF4-212ENST00000498540 PICALMQ13492 652 aa18.28■□□□□ 0.52
TRAF4-212ENST00000498540 ALDH1L2Q3SY69 923 aa18.28■□□□□ 0.52
TRAF4-212ENST00000498540 ZGPATQ8N5A5 531 aaKnown RBP18.28■□□□□ 0.52
TRAF4-212ENST00000498540 SMCR8Q8TEV9 937 aaPredicted RBP18.28■□□□□ 0.52
TRAF4-212ENST00000498540 SMC4Q9NTJ3 1288 aa18.28■□□□□ 0.52
TRAF4-212ENST00000498540 NR2E3Q9Y5X4 410 aa18.28■□□□□ 0.52
TRAF4-212ENST00000498540 ATAD5Q96QE3 1844 aa18.28■□□□□ 0.52
TRAF4-212ENST00000498540 ZBTB22O15209 634 aa18.27■□□□□ 0.52
TRAF4-212ENST00000498540 CTNND1O60716 968 aaKnown RBP18.27■□□□□ 0.52
TRAF4-212ENST00000498540 BTDP43251 543 aa18.27■□□□□ 0.52
TRAF4-212ENST00000498540 SLFN5Q08AF3 891 aa18.27■□□□□ 0.52
TRAF4-212ENST00000498540 IRF5Q13568 498 aa18.27■□□□□ 0.52
TRAF4-212ENST00000498540 PXYLP1Q8TE99 480 aa18.27■□□□□ 0.52
TRAF4-212ENST00000498540 DEFB118Q96PH6 123 aa18.27■□□□□ 0.52
TRAF4-212ENST00000498540 ABCF2Q9UG63 623 aa18.27■□□□□ 0.52
TRAF4-212ENST00000498540 MROH7-TTC4A0A0A0MT08 1334 aa18.26■□□□□ 0.51
TRAF4-212ENST00000498540 TREML2Q5T2D2 321 aa18.26■□□□□ 0.51
TRAF4-212ENST00000498540 ANKRD13CQ8N6S4 541 aa18.26■□□□□ 0.51
TRAF4-212ENST00000498540 FAM163AQ96GL9 167 aaPredicted RBP18.26■□□□□ 0.51
TRAF4-212ENST00000498540 PAK6Q9NQU5 681 aaPredicted RBP18.26■□□□□ 0.51
TRAF4-212ENST00000498540 TAOK2Q9UL54 1235 aa18.26■□□□□ 0.51
TRAF4-212ENST00000498540 AGTPBP1Q9UPW5 1226 aa18.26■□□□□ 0.51
TRAF4-212ENST00000498540 PDS5AQ29RF7 1337 aaKnown RBP18.25■□□□□ 0.51
TRAF4-212ENST00000498540 FAM196BA6NMK8 535 aa18.25■□□□□ 0.51
TRAF4-212ENST00000498540 TIMM10P62072 90 aa18.25■□□□□ 0.51
TRAF4-212ENST00000498540 ZNF384Q8TF68 577 aa18.25■□□□□ 0.51
TRAF4-212ENST00000498540 COPRSQ9NQ92 184 aa18.25■□□□□ 0.51
TRAF4-212ENST00000498540 ZNF316A6NFI3 1004 aaPredicted RBP18.24■□□□□ 0.51
TRAF4-212ENST00000498540 EVI5O60447 810 aa18.24■□□□□ 0.51
TRAF4-212ENST00000498540 TFRCP02786 760 aaKnown RBP18.24■□□□□ 0.51
TRAF4-212ENST00000498540 RHBDL3P58872 404 aa18.24■□□□□ 0.51
TRAF4-212ENST00000498540 MECOMQ03112 1051 aa18.24■□□□□ 0.51
TRAF4-212ENST00000498540 SLF2Q8IX21 1173 aa18.24■□□□□ 0.51
TRAF4-212ENST00000498540 CDCA7LQ96GN5 454 aa18.24■□□□□ 0.51
TRAF4-212ENST00000498540 SOX1O00570 391 aaPredicted RBP18.23■□□□□ 0.51
TRAF4-212ENST00000498540 FAM110CQ1W6H9 321 aa18.23■□□□□ 0.51
TRAF4-212ENST00000498540 DIS3LQ8TF46 1054 aaKnown RBP18.23■□□□□ 0.51
TRAF4-212ENST00000498540 COA7Q96BR5 231 aa18.23■□□□□ 0.51
TRAF4-212ENST00000498540 MEIS3Q99687 375 aa18.23■□□□□ 0.51
TRAF4-212ENST00000498540 CRISPLD2Q9H0B8 497 aa18.23■□□□□ 0.51
TRAF4-212ENST00000498540 NOB1Q9ULX3 412 aaKnown RBP18.23■□□□□ 0.51
TRAF4-212ENST00000498540 GPR75-ASB3A0A0A6YYF3 556 aa18.22■□□□□ 0.51
TRAF4-212ENST00000498540 A0A1B0GUL7 405 aa18.22■□□□□ 0.51
TRAF4-212ENST00000498540 SPTY2D1Q68D10 685 aaPredicted RBP18.22■□□□□ 0.51
TRAF4-212ENST00000498540 XAGE2Q96GT9 111 aa18.22■□□□□ 0.51
TRAF4-212ENST00000498540 PAWRQ96IZ0 340 aaKnown RBP18.22■□□□□ 0.51
TRAF4-212ENST00000498540 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.22■□□□□ 0.51
TRAF4-212ENST00000498540 PNMA3Q9UL41 463 aa18.22■□□□□ 0.51
TRAF4-212ENST00000498540 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.22■□□□□ 0.51
TRAF4-212ENST00000498540 PLXNB2O15031 1838 aa18.21■□□□□ 0.51
TRAF4-212ENST00000498540 LAMA3Q16787 3333 aa18.21■□□□□ 0.51
TRAF4-212ENST00000498540 A0A1W2PPC1 479 aa18.21■□□□□ 0.51
TRAF4-212ENST00000498540 TBC1D12O60347 775 aa18.21■□□□□ 0.51
TRAF4-212ENST00000498540 TFCP2Q12800 502 aa18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms