RNA–Protein interactions for RNA: ENST00000498443.5

TSPAN1-209, Transcript of tetraspanin 1, humanhuman

TSL 5

Gene TSPAN1, Length 1,071 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN1-209ENST00000498443 GNL3LQ9NVN8 582 aaKnown RBP12.16□□□□□ -0.46
TSPAN1-209ENST00000498443 DENND2AQ9ULE3 1009 aa12.16□□□□□ -0.46
TSPAN1-209ENST00000498443 SPDYE2BA6NHP3 402 aa12.15□□□□□ -0.46
TSPAN1-209ENST00000498443 TCP10L2B9ZVM9 353 aa12.15□□□□□ -0.46
TSPAN1-209ENST00000498443 ERC2O15083 957 aa12.15□□□□□ -0.46
TSPAN1-209ENST00000498443 SPDYE6P0CI01 402 aa12.15□□□□□ -0.46
TSPAN1-209ENST00000498443 NF2P35240 595 aa12.15□□□□□ -0.46
TSPAN1-209ENST00000498443 MCM2P49736 904 aa12.15□□□□□ -0.46
TSPAN1-209ENST00000498443 FKBP1AP62942 108 aaKnown RBP12.15□□□□□ -0.46
TSPAN1-209ENST00000498443 MECOMQ03112 1051 aa12.15□□□□□ -0.46
TSPAN1-209ENST00000498443 OTOP1Q7RTM1 612 aa12.15□□□□□ -0.46
TSPAN1-209ENST00000498443 WDR66Q8TBY9 1149 aa12.15□□□□□ -0.46
TSPAN1-209ENST00000498443 LRRCC1Q9C099 1032 aa12.15□□□□□ -0.46
TSPAN1-209ENST00000498443 VEZTQ9HBM0 779 aa12.15□□□□□ -0.46
TSPAN1-209ENST00000498443 CWC22Q9HCG8 908 aaKnown RBP12.15□□□□□ -0.46
TSPAN1-209ENST00000498443 ZNF70Q9UC06 446 aaPredicted RBP12.15□□□□□ -0.46
TSPAN1-209ENST00000498443 DAGLAQ9Y4D2 1042 aa12.15□□□□□ -0.46
TSPAN1-209ENST00000498443 MYO3BQ8WXR4 1341 aa12.14□□□□□ -0.47
TSPAN1-209ENST00000498443 MYH13Q9UKX3 1938 aa12.14□□□□□ -0.47
TSPAN1-209ENST00000498443 LDHBP07195 334 aaKnown RBP12.14□□□□□ -0.47
TSPAN1-209ENST00000498443 IFIT2P09913 472 aaKnown RBP12.14□□□□□ -0.47
TSPAN1-209ENST00000498443 GSPT1P15170 499 aaKnown RBP12.14□□□□□ -0.47
TSPAN1-209ENST00000498443 NUCB2P80303 420 aa12.14□□□□□ -0.47
TSPAN1-209ENST00000498443 CCDC158Q5M9N0 1113 aa12.14□□□□□ -0.47
TSPAN1-209ENST00000498443 ERC1Q8IUD2 1116 aa12.14□□□□□ -0.47
TSPAN1-209ENST00000498443 CLASRPQ8N2M8 674 aaKnown RBP12.14□□□□□ -0.47
TSPAN1-209ENST00000498443 SDSP20132 328 aa12.13□□□□□ -0.47
TSPAN1-209ENST00000498443 DDIT3P35638 169 aa12.13□□□□□ -0.47
TSPAN1-209ENST00000498443 NFIAQ12857 509 aa12.13□□□□□ -0.47
TSPAN1-209ENST00000498443 CD99L2Q8TCZ2 262 aa12.13□□□□□ -0.47
TSPAN1-209ENST00000498443 TBC1D22AQ8WUA7 517 aa12.13□□□□□ -0.47
TSPAN1-209ENST00000498443 DNAJC2Q99543 621 aaKnown RBP12.13□□□□□ -0.47
TSPAN1-209ENST00000498443 TMEM106CQ9BVX2 250 aa12.13□□□□□ -0.47
TSPAN1-209ENST00000498443 RAI14Q9P0K7 980 aa12.13□□□□□ -0.47
TSPAN1-209ENST00000498443 GOLIM4O00461 696 aa12.12□□□□□ -0.47
TSPAN1-209ENST00000498443 SEMA3EO15041 775 aa12.12□□□□□ -0.47
TSPAN1-209ENST00000498443 UQCRFS1P1P0C7P4 283 aa12.12□□□□□ -0.47
TSPAN1-209ENST00000498443 PDE1AP54750 535 aa12.12□□□□□ -0.47
TSPAN1-209ENST00000498443 DYNLL1P63167 89 aaKnown RBP12.12□□□□□ -0.47
TSPAN1-209ENST00000498443 TCP10Q12799 353 aa12.12□□□□□ -0.47
TSPAN1-209ENST00000498443 SPDYE2Q495Y8 402 aa12.12□□□□□ -0.47
TSPAN1-209ENST00000498443 NOM1Q5C9Z4 860 aaKnown RBP12.12□□□□□ -0.47
TSPAN1-209ENST00000498443 NBPF12Q5TAG4 269 aaPredicted RBP12.12□□□□□ -0.47
TSPAN1-209ENST00000498443 CDC42EP5Q6NZY7 148 aa12.12□□□□□ -0.47
TSPAN1-209ENST00000498443 ARMC9Q7Z3E5 817 aa12.12□□□□□ -0.47
TSPAN1-209ENST00000498443 MTMR14Q8NCE2 650 aa12.12□□□□□ -0.47
TSPAN1-209ENST00000498443 SLC17A8Q8NDX2 589 aa12.12□□□□□ -0.47
TSPAN1-209ENST00000498443 NSUN4Q96CB9 384 aaKnown RBP12.12□□□□□ -0.47
TSPAN1-209ENST00000498443 USP26Q9BXU7 913 aa12.12□□□□□ -0.47
TSPAN1-209ENST00000498443 TMEM39BQ9GZU3 492 aa12.12□□□□□ -0.47
TSPAN1-209ENST00000498443 STAP2Q9UGK3 403 aa12.12□□□□□ -0.47
TSPAN1-209ENST00000498443 SERPINA10Q9UK55 444 aa12.12□□□□□ -0.47
TSPAN1-209ENST00000498443 ANGEL1Q9UNK9 670 aaKnown RBP12.12□□□□□ -0.47
TSPAN1-209ENST00000498443 PITPNM2Q9BZ72 1349 aa12.11□□□□□ -0.47
TSPAN1-209ENST00000498443 SALL1Q9NSC2 1324 aa12.11□□□□□ -0.47
TSPAN1-209ENST00000498443 H0YGN5 161 aa12.11□□□□□ -0.47
TSPAN1-209ENST00000498443 TRAK2O60296 914 aa12.11□□□□□ -0.47
TSPAN1-209ENST00000498443 ANAPC15P60006 121 aa12.11□□□□□ -0.47
TSPAN1-209ENST00000498443 RASA3Q14644 834 aa12.11□□□□□ -0.47
TSPAN1-209ENST00000498443 RAB3GAP1Q15042 981 aa12.11□□□□□ -0.47
TSPAN1-209ENST00000498443 SLC4A8Q2Y0W8 1093 aa12.11□□□□□ -0.47
TSPAN1-209ENST00000498443 CHRDL2Q6WN34 429 aa12.11□□□□□ -0.47
TSPAN1-209ENST00000498443 TEKT1Q969V4 418 aa12.11□□□□□ -0.47
TSPAN1-209ENST00000498443 ZDHHC15Q96MV8 337 aa12.11□□□□□ -0.47
TSPAN1-209ENST00000498443 KIF2CQ99661 725 aa12.11□□□□□ -0.47
TSPAN1-209ENST00000498443 DEFB129Q9H1M3 183 aa12.11□□□□□ -0.47
TSPAN1-209ENST00000498443 DDX4Q9NQI0 724 aaKnown RBP12.11□□□□□ -0.47
TSPAN1-209ENST00000498443 USP40Q9NVE5 1235 aa12.11□□□□□ -0.47
TSPAN1-209ENST00000498443 LRP2BPQ9P2M1 347 aa12.11□□□□□ -0.47
TSPAN1-209ENST00000498443 PTPN22Q9Y2R2 807 aa12.11□□□□□ -0.47
TSPAN1-209ENST00000498443 CENPFP49454 3210 aa12.11□□□□□ -0.47
TSPAN1-209ENST00000498443 GOLGA6L3A6NEY3 463 aa12.1□□□□□ -0.47
TSPAN1-209ENST00000498443 IDH1O75874 414 aaKnown RBP12.1□□□□□ -0.47
TSPAN1-209ENST00000498443 ALDH1A1P00352 501 aa12.1□□□□□ -0.47
TSPAN1-209ENST00000498443 MX1P20591 662 aa12.1□□□□□ -0.47
TSPAN1-209ENST00000498443 BTDP43251 543 aa12.1□□□□□ -0.47
TSPAN1-209ENST00000498443 EVX2Q03828 476 aa12.1□□□□□ -0.47
TSPAN1-209ENST00000498443 SPRYD7Q5W111 196 aa12.1□□□□□ -0.47
TSPAN1-209ENST00000498443 CLEC17AQ6ZS10 378 aa12.1□□□□□ -0.47
TSPAN1-209ENST00000498443 DZIP1Q86YF9 867 aaKnown RBP12.1□□□□□ -0.47
TSPAN1-209ENST00000498443 ERO1AQ96HE7 468 aa12.1□□□□□ -0.47
TSPAN1-209ENST00000498443 ZNF512BQ96KM6 892 aaPredicted RBP12.1□□□□□ -0.47
TSPAN1-209ENST00000498443 TEPSINQ96N21 525 aa12.1□□□□□ -0.47
TSPAN1-209ENST00000498443 EFCC1Q9HA90 598 aa12.1□□□□□ -0.47
TSPAN1-209ENST00000498443 FAM198AQ9UFP1 575 aa12.1□□□□□ -0.47
TSPAN1-209ENST00000498443 KIAA0100Q14667 2235 aaKnown RBP12.1□□□□□ -0.47
TSPAN1-209ENST00000498443 RBBP6Q7Z6E9 1792 aaKnown RBP12.1□□□□□ -0.47
TSPAN1-209ENST00000498443 SSC5DA1L4H1 1573 aa12.09□□□□□ -0.47
TSPAN1-209ENST00000498443 MYH2Q9UKX2 1941 aa12.09□□□□□ -0.47
TSPAN1-209ENST00000498443 ATP5JP18859 108 aa12.09□□□□□ -0.47
TSPAN1-209ENST00000498443 RHBDL3P58872 404 aa12.09□□□□□ -0.47
TSPAN1-209ENST00000498443 HHIPL2Q6UWX4 724 aa12.09□□□□□ -0.47
TSPAN1-209ENST00000498443 SH3BP5LQ7L8J4 393 aa12.09□□□□□ -0.47
TSPAN1-209ENST00000498443 IFNL1Q8IU54 200 aa12.09□□□□□ -0.47
TSPAN1-209ENST00000498443 MAGEB6Q8N7X4 407 aa12.09□□□□□ -0.47
TSPAN1-209ENST00000498443 MIGA1Q8NAN2 632 aa12.09□□□□□ -0.47
TSPAN1-209ENST00000498443 SPRYD3Q8NCJ5 442 aa12.09□□□□□ -0.47
TSPAN1-209ENST00000498443 SH3RF3Q8TEJ3 882 aaPredicted RBP12.09□□□□□ -0.47
TSPAN1-209ENST00000498443 SLC10A4Q96EP9 437 aa12.09□□□□□ -0.47
TSPAN1-209ENST00000498443 GAKO14976 1311 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms