RNA–Protein interactions for RNA: ENST00000498271.1

C4A-259, Transcript of complement C4A (Rodgers blood group), humanhuman

TSL 1 (best) BASIC

Gene C4A, Length 5,269 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C4A-259ENST00000498271 IFT81Q8WYA0 676 aa16.91■□□□□ 0.3
C4A-259ENST00000498271 CCDC160A6NGH7 325 aa16.91■□□□□ 0.3
C4A-259ENST00000498271 IRS4O14654 1257 aaPredicted RBP16.91■□□□□ 0.3
C4A-259ENST00000498271 FERP16591 822 aa16.91■□□□□ 0.3
C4A-259ENST00000498271 GOLGA6BA6NDN3 693 aa16.91■□□□□ 0.3
C4A-259ENST00000498271 IFT20Q8IY31 132 aa16.91■□□□□ 0.3
C4A-259ENST00000498271 LRRC45Q96CN5 670 aa16.91■□□□□ 0.3
C4A-259ENST00000498271 UNC13BO14795 1591 aa16.91■□□□□ 0.3
C4A-259ENST00000498271 TSNAXIP1Q2TAA8 658 aa16.9■□□□□ 0.3
C4A-259ENST00000498271 CRACR2BQ8N4Y2 399 aaPredicted RBP16.9■□□□□ 0.3
C4A-259ENST00000498271 CRNKL1Q9BZJ0 848 aaKnown RBP16.9■□□□□ 0.3
C4A-259ENST00000498271 EYA2O00167 538 aa16.9■□□□□ 0.3
C4A-259ENST00000498271 INTS8Q75QN2 995 aaKnown RBP16.9■□□□□ 0.3
C4A-259ENST00000498271 SSH3Q8TE77 659 aa16.9■□□□□ 0.3
C4A-259ENST00000498271 IBTKQ9P2D0 1353 aaPredicted RBP16.9■□□□□ 0.3
C4A-259ENST00000498271 EFCAB6Q5THR3 1501 aa16.9■□□□□ 0.3
C4A-259ENST00000498271 FANCCQ00597 558 aa16.9■□□□□ 0.3
C4A-259ENST00000498271 SLC4A8Q2Y0W8 1093 aa16.9■□□□□ 0.3
C4A-259ENST00000498271 HSP90AA4PQ58FG1 418 aa16.9■□□□□ 0.3
C4A-259ENST00000498271 CEP128Q6ZU80 1094 aa16.9■□□□□ 0.3
C4A-259ENST00000498271 EHMT1Q9H9B1 1298 aa16.9■□□□□ 0.3
C4A-259ENST00000498271 HECW2Q9P2P5 1572 aa16.9■□□□□ 0.3
C4A-259ENST00000498271 JAKMIP2Q96AA8 810 aa16.9■□□□□ 0.3
C4A-259ENST00000498271 CLTCL1P53675 1640 aa16.9■□□□□ 0.3
C4A-259ENST00000498271 KIF3CO14782 793 aa16.9■□□□□ 0.3
C4A-259ENST00000498271 TMTC1Q8IUR5 882 aa16.9■□□□□ 0.3
C4A-259ENST00000498271 ACSBG1Q96GR2 724 aa16.9■□□□□ 0.3
C4A-259ENST00000498271 TSNARE1Q96NA8 513 aa16.9■□□□□ 0.3
C4A-259ENST00000498271 VCXQ9H320 206 aa16.9■□□□□ 0.3
C4A-259ENST00000498271 CROCC2H7BZ55 1655 aa16.89■□□□□ 0.29
C4A-259ENST00000498271 PPFIA4O75335 1185 aa16.89■□□□□ 0.29
C4A-259ENST00000498271 BAG3O95817 575 aa16.89■□□□□ 0.29
C4A-259ENST00000498271 GCKRQ14397 625 aa16.89■□□□□ 0.29
C4A-259ENST00000498271 SPTY2D1Q68D10 685 aaPredicted RBP16.89■□□□□ 0.29
C4A-259ENST00000498271 NEK11Q8NG66 645 aa16.89■□□□□ 0.29
C4A-259ENST00000498271 NAP1L3Q99457 506 aaPredicted RBP16.89■□□□□ 0.29
C4A-259ENST00000498271 NIP7Q9Y221 180 aaKnown RBP eCLIP16.89■□□□□ 0.291e-8■■□□□ 12
C4A-259ENST00000498271 MAP3K4Q9Y6R4 1608 aa16.89■□□□□ 0.29
C4A-259ENST00000498271 BRD1O95696 1058 aa16.89■□□□□ 0.29
C4A-259ENST00000498271 HELBQ8NG08 1087 aaPredicted RBP16.89■□□□□ 0.29
C4A-259ENST00000498271 STMN2Q93045 179 aa16.89■□□□□ 0.29
C4A-259ENST00000498271 FEZ2Q9UHY8 353 aaPredicted RBP16.89■□□□□ 0.29
C4A-259ENST00000498271 IFIT1BQ5T764 474 aaKnown RBP16.89■□□□□ 0.29
C4A-259ENST00000498271 ERCC6L2Q5T890 1561 aa16.89■□□□□ 0.29
C4A-259ENST00000498271 JDP2Q8WYK2 163 aa16.89■□□□□ 0.29
C4A-259ENST00000498271 FERMT1Q9BQL6 677 aa16.89■□□□□ 0.29
C4A-259ENST00000498271 VGLL3A8MV65 326 aa16.89■□□□□ 0.29
C4A-259ENST00000498271 EFCAB8A8MWE9 144 aa16.89■□□□□ 0.29
C4A-259ENST00000498271 PCK1P35558 622 aa16.89■□□□□ 0.29
C4A-259ENST00000498271 C8orf74Q6P047 294 aa16.89■□□□□ 0.29
C4A-259ENST00000498271 ZNF710Q8N1W2 664 aa16.89■□□□□ 0.29
C4A-259ENST00000498271 KIAA1524Q8TCG1 905 aa16.89■□□□□ 0.29
C4A-259ENST00000498271 TMEM63CQ9P1W3 806 aa16.89■□□□□ 0.29
C4A-259ENST00000498271 IGSF22Q8N9C0 903 aa16.88■□□□□ 0.29
C4A-259ENST00000498271 CCDC110Q8TBZ0 833 aa16.88■□□□□ 0.29
C4A-259ENST00000498271 CUL5Q93034 780 aa16.88■□□□□ 0.29
C4A-259ENST00000498271 MMRN2Q9H8L6 949 aa16.88■□□□□ 0.29
C4A-259ENST00000498271 NBPF5PQ86XG9 351 aaPredicted RBP16.88■□□□□ 0.29
C4A-259ENST00000498271 C17orf53Q8N3J3 647 aaPredicted RBP16.88■□□□□ 0.29
C4A-259ENST00000498271 DHX58Q96C10 678 aa16.88■□□□□ 0.29
C4A-259ENST00000498271 PARP3Q9Y6F1 533 aa16.88■□□□□ 0.29
C4A-259ENST00000498271 NKIRAS1Q9NYS0 192 aa16.88■□□□□ 0.29
C4A-259ENST00000498271 KCNQ3O43525 872 aa16.88■□□□□ 0.29
C4A-259ENST00000498271 KRT13P13646 458 aa16.88■□□□□ 0.29
C4A-259ENST00000498271 CABS1Q96KC9 395 aa16.88■□□□□ 0.29
C4A-259ENST00000498271 NOL3O60936 208 aaKnown RBP16.87■□□□□ 0.29
C4A-259ENST00000498271 NLRP12P59046 1061 aa16.87■□□□□ 0.29
C4A-259ENST00000498271 FAM89AQ96GI7 184 aa16.87■□□□□ 0.29
C4A-259ENST00000498271 GNAQP50148 359 aa16.87■□□□□ 0.29
C4A-259ENST00000498271 IQUBQ8NA54 791 aa16.87■□□□□ 0.29
C4A-259ENST00000498271 MLKLQ8NB16 471 aa16.87■□□□□ 0.29
C4A-259ENST00000498271 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.87■□□□□ 0.29
C4A-259ENST00000498271 ZNF622Q969S3 477 aaKnown RBP eCLIP16.87■□□□□ 0.29
C4A-259ENST00000498271 MED4Q9NPJ6 270 aa16.87■□□□□ 0.29
C4A-259ENST00000498271 TRAF1Q13077 416 aa16.87■□□□□ 0.29
C4A-259ENST00000498271 GRIPAP1Q4V328 841 aa16.87■□□□□ 0.29
C4A-259ENST00000498271 NAA16Q6N069 864 aaPredicted RBP16.87■□□□□ 0.29
C4A-259ENST00000498271 MAGEB6Q8N7X4 407 aa16.87■□□□□ 0.29
C4A-259ENST00000498271 WHAMMP3Q1A5X7 153 aa16.86■□□□□ 0.29
C4A-259ENST00000498271 ERMNQ8TAM6 284 aa16.86■□□□□ 0.29
C4A-259ENST00000498271 ZNF496Q96IT1 587 aaPredicted RBP16.86■□□□□ 0.29
C4A-259ENST00000498271 TSKSQ9UJT2 592 aa16.86■□□□□ 0.29
C4A-259ENST00000498271 C6orf229H3BNL8 230 aa16.86■□□□□ 0.29
C4A-259ENST00000498271 GNAT2P19087 354 aa16.86■□□□□ 0.29
C4A-259ENST00000498271 USP37Q86T82 979 aa16.86■□□□□ 0.29
C4A-259ENST00000498271 UBLCP1Q8WVY7 318 aaPredicted RBP16.86■□□□□ 0.29
C4A-259ENST00000498271 ABCC3O15438 1527 aa16.86■□□□□ 0.29
C4A-259ENST00000498271 CALCOCO2Q13137 446 aa16.86■□□□□ 0.29
C4A-259ENST00000498271 PPP4R3AQ6IN85 833 aa16.86■□□□□ 0.29
C4A-259ENST00000498271 NUP58Q9BVL2 599 aa16.86■□□□□ 0.29
C4A-259ENST00000498271 SSH2Q76I76 1423 aa16.86■□□□□ 0.29
C4A-259ENST00000498271 TBCAO75347 108 aaKnown RBP16.86■□□□□ 0.29
C4A-259ENST00000498271 CIB2O75838 187 aa16.86■□□□□ 0.29
C4A-259ENST00000498271 ZNF853P0CG23 659 aa16.86■□□□□ 0.29
C4A-259ENST00000498271 CALM1P0DP23 149 aa16.86■□□□□ 0.29
C4A-259ENST00000498271 CALM2P0DP24 149 aa16.86■□□□□ 0.29
C4A-259ENST00000498271 CALM3P0DP25 149 aa16.86■□□□□ 0.29
C4A-259ENST00000498271 CALML3P27482 149 aa16.86■□□□□ 0.29
C4A-259ENST00000498271 PAK2Q13177 524 aa16.86■□□□□ 0.29
C4A-259ENST00000498271 MTUS1Q9ULD2 1270 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms