RNA–Protein interactions for RNA: ENST00000498205.5

SSR3-209, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 2

Gene SSR3, Length 593 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-209ENST00000498205 KCT2Q8NC54 265 aa8.05□□□□□ -1.12
SSR3-209ENST00000498205 RNF214Q8ND24 703 aa8.05□□□□□ -1.12
SSR3-209ENST00000498205 GRIN3AQ8TCU5 1115 aa8.05□□□□□ -1.12
SSR3-209ENST00000498205 METTL5Q9NRN9 209 aaKnown RBP8.05□□□□□ -1.12
SSR3-209ENST00000498205 PCDHA4Q9UN74 947 aa8.05□□□□□ -1.12
SSR3-209ENST00000498205 TACC3Q9Y6A5 838 aa8.05□□□□□ -1.12
SSR3-209ENST00000498205 SNCAIPQ9Y6H5 919 aa8.05□□□□□ -1.12
SSR3-209ENST00000498205 PRSS36Q5K4E3 855 aa8.04□□□□□ -1.12
SSR3-209ENST00000498205 CDPF1Q6NVV7 123 aa8.04□□□□□ -1.12
SSR3-209ENST00000498205 HDXQ7Z353 690 aa8.04□□□□□ -1.12
SSR3-209ENST00000498205 TMEM87AQ8NBN3 555 aa8.04□□□□□ -1.12
SSR3-209ENST00000498205 FBLIM1Q8WUP2 373 aa8.04□□□□□ -1.12
SSR3-209ENST00000498205 ELMO3Q96BJ8 720 aa8.04□□□□□ -1.12
SSR3-209ENST00000498205 FAM105AQ9NUU6 356 aa8.04□□□□□ -1.12
SSR3-209ENST00000498205 FANCGO15287 622 aa8.03□□□□□ -1.12
SSR3-209ENST00000498205 LMNB2Q03252 620 aa8.03□□□□□ -1.12
SSR3-209ENST00000498205 NFKBIBQ15653 356 aa8.03□□□□□ -1.12
SSR3-209ENST00000498205 TSNAXIP1Q2TAA8 658 aa8.03□□□□□ -1.12
SSR3-209ENST00000498205 TMEM74Q96NL1 305 aa8.03□□□□□ -1.12
SSR3-209ENST00000498205 METTL22Q9BUU2 404 aaPredicted RBP8.03□□□□□ -1.12
SSR3-209ENST00000498205 SEMA6CQ9H3T2 930 aa8.03□□□□□ -1.12
SSR3-209ENST00000498205 PICK1Q9NRD5 415 aa8.03□□□□□ -1.12
SSR3-209ENST00000498205 DISC1Q9NRI5 854 aa8.03□□□□□ -1.12
SSR3-209ENST00000498205 PCOLCE2Q9UKZ9 415 aa8.03□□□□□ -1.12
SSR3-209ENST00000498205 HMX2A2RU54 273 aa8.02□□□□□ -1.13
SSR3-209ENST00000498205 RAB6AP20340 208 aa8.02□□□□□ -1.13
SSR3-209ENST00000498205 CYP27A1Q02318 531 aa8.02□□□□□ -1.13
SSR3-209ENST00000498205 MAP3K11Q16584 847 aa8.02□□□□□ -1.13
SSR3-209ENST00000498205 SMYD4Q8IYR2 804 aaPredicted RBP8.02□□□□□ -1.13
SSR3-209ENST00000498205 PHC3Q8NDX5 983 aa8.02□□□□□ -1.13
SSR3-209ENST00000498205 GAL3ST3Q96A11 431 aa8.02□□□□□ -1.13
SSR3-209ENST00000498205 PODXL2Q9NZ53 605 aa8.02□□□□□ -1.13
SSR3-209ENST00000498205 GBP2P32456 591 aaPredicted RBP8.01□□□□□ -1.13
SSR3-209ENST00000498205 RING1Q06587 406 aa8.01□□□□□ -1.13
SSR3-209ENST00000498205 TTLL4Q14679 1199 aa8.01□□□□□ -1.13
SSR3-209ENST00000498205 RASIP1Q5U651 963 aa8.01□□□□□ -1.13
SSR3-209ENST00000498205 ERMP1Q7Z2K6 904 aa8.01□□□□□ -1.13
SSR3-209ENST00000498205 NFICP08651 508 aa8□□□□□ -1.13
SSR3-209ENST00000498205 TFE3P19532 575 aaPredicted RBP8□□□□□ -1.13
SSR3-209ENST00000498205 MRRFQ96E11 262 aaKnown RBP8□□□□□ -1.13
SSR3-209ENST00000498205 RHOVQ96L33 236 aa8□□□□□ -1.13
SSR3-209ENST00000498205 BACH2Q9BYV9 841 aa8□□□□□ -1.13
SSR3-209ENST00000498205 SSU72Q9NP77 194 aaKnown RBP8□□□□□ -1.13
SSR3-209ENST00000498205 RNF112Q9ULX5 631 aa8□□□□□ -1.13
SSR3-209ENST00000498205 DAGLAQ9Y4D2 1042 aa8□□□□□ -1.13
SSR3-209ENST00000498205 ROBO2Q9HCK4 1378 aa7.99□□□□□ -1.13
SSR3-209ENST00000498205 SCAMP3O14828 347 aaKnown RBP7.99□□□□□ -1.13
SSR3-209ENST00000498205 RNGTTO60942 597 aaKnown RBP7.99□□□□□ -1.13
SSR3-209ENST00000498205 BPNT1O95861 308 aa7.99□□□□□ -1.13
SSR3-209ENST00000498205 ZNF76P36508 570 aa7.99□□□□□ -1.13
SSR3-209ENST00000498205 RPL6Q02878 288 aaKnown RBP7.99□□□□□ -1.13
SSR3-209ENST00000498205 CAMK2GQ13555 558 aaPredicted RBP7.99□□□□□ -1.13
SSR3-209ENST00000498205 CDC37L1Q7L3B6 337 aa7.99□□□□□ -1.13
SSR3-209ENST00000498205 CYFIP1Q7L576 1253 aa7.99□□□□□ -1.13
SSR3-209ENST00000498205 ZNF507Q8TCN5 953 aa7.99□□□□□ -1.13
SSR3-209ENST00000498205 TBC1D32Q96NH3 1257 aa7.99□□□□□ -1.13
SSR3-209ENST00000498205 ATG3Q9NT62 314 aa7.99□□□□□ -1.13
SSR3-209ENST00000498205 PRKAG2Q9UGJ0 569 aa7.99□□□□□ -1.13
SSR3-209ENST00000498205 GGT7Q9UJ14 662 aa7.99□□□□□ -1.13
SSR3-209ENST00000498205 DCDC2CA8MYV0 355 aa7.98□□□□□ -1.13
SSR3-209ENST00000498205 HCLS1P14317 486 aaPredicted RBP7.98□□□□□ -1.13
SSR3-209ENST00000498205 GRIK1P39086 918 aa7.98□□□□□ -1.13
SSR3-209ENST00000498205 PDE4BQ07343 736 aa7.98□□□□□ -1.13
SSR3-209ENST00000498205 ZBTB37Q5TC79 503 aa7.98□□□□□ -1.13
SSR3-209ENST00000498205 SEZ6L2Q6UXD5 910 aa7.98□□□□□ -1.13
SSR3-209ENST00000498205 MPRIPQ6WCQ1 1025 aa7.98□□□□□ -1.13
SSR3-209ENST00000498205 ZAR1Q86SH2 424 aa7.98□□□□□ -1.13
SSR3-209ENST00000498205 GATAD2BQ8WXI9 593 aa7.98□□□□□ -1.13
SSR3-209ENST00000498205 TLR6Q9Y2C9 796 aa7.98□□□□□ -1.13
SSR3-209ENST00000498205 PCDHB5Q9Y5E4 795 aa7.98□□□□□ -1.13
SSR3-209ENST00000498205 SEPT6Q14141 434 aa7.97□□□□□ -1.13
SSR3-209ENST00000498205 PPM1JQ5JR12 505 aa7.97□□□□□ -1.13
SSR3-209ENST00000498205 WIPI1Q5MNZ9 446 aaPredicted RBP7.97□□□□□ -1.13
SSR3-209ENST00000498205 DUSP27Q5VZP5 1158 aa7.97□□□□□ -1.13
SSR3-209ENST00000498205 INTS5Q6P9B9 1019 aaKnown RBP7.97□□□□□ -1.13
SSR3-209ENST00000498205 C12orf40Q86WS4 652 aa7.97□□□□□ -1.13
SSR3-209ENST00000498205 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.97□□□□□ -1.13
SSR3-209ENST00000498205 RNF34Q969K3 372 aa7.97□□□□□ -1.13
SSR3-209ENST00000498205 PLPPR2Q96GM1 343 aa7.97□□□□□ -1.13
SSR3-209ENST00000498205 OSBPL1AQ9BXW6 950 aa7.97□□□□□ -1.13
SSR3-209ENST00000498205 WNT10AQ9GZT5 417 aa7.97□□□□□ -1.13
SSR3-209ENST00000498205 KCNQ5Q9NR82 932 aa7.97□□□□□ -1.13
SSR3-209ENST00000498205 SUPT16HQ9Y5B9 1047 aaKnown RBP7.97□□□□□ -1.13
SSR3-209ENST00000498205 PF4P02776 101 aa7.96□□□□□ -1.14
SSR3-209ENST00000498205 CYP27C1Q4G0S4 372 aa7.96□□□□□ -1.14
SSR3-209ENST00000498205 SNAP47Q5SQN1 464 aa7.96□□□□□ -1.14
SSR3-209ENST00000498205 LRFN4Q6PJG9 635 aa7.96□□□□□ -1.14
SSR3-209ENST00000498205 ISL2Q96A47 359 aa7.96□□□□□ -1.14
SSR3-209ENST00000498205 MFSD14AQ96MC6 490 aa7.96□□□□□ -1.14
SSR3-209ENST00000498205 KBTBD4Q9NVX7 518 aa7.96□□□□□ -1.14
SSR3-209ENST00000498205 PRAMEF27A3QJZ7 478 aa7.95□□□□□ -1.14
SSR3-209ENST00000498205 GFRA2O00451 464 aa7.95□□□□□ -1.14
SSR3-209ENST00000498205 CILPO75339 1184 aa7.95□□□□□ -1.14
SSR3-209ENST00000498205 RECKO95980 971 aa7.95□□□□□ -1.14
SSR3-209ENST00000498205 NEFMP07197 916 aa7.95□□□□□ -1.14
SSR3-209ENST00000498205 ITGB7P26010 798 aa7.95□□□□□ -1.14
SSR3-209ENST00000498205 EIF4A3P38919 411 aaKnown RBP7.95□□□□□ -1.14
SSR3-209ENST00000498205 CAP2P40123 477 aa7.95□□□□□ -1.14
SSR3-209ENST00000498205 FANCCQ00597 558 aa7.95□□□□□ -1.14
SSR3-209ENST00000498205 PTPN11Q06124 597 aaPredicted RBP7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms