RNA–Protein interactions for RNA: ENST00000498077.6

XRN1-214, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 5,600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-214ENST00000498077 POTEEQ6S8J3 1075 aa1.76□□□□□ -2.13
XRN1-214ENST00000498077 ATF7IPQ6VMQ6 1270 aa1.76□□□□□ -2.13
XRN1-214ENST00000498077 UNC5CLQ8IV45 518 aa1.76□□□□□ -2.13
XRN1-214ENST00000498077 GSPT2Q8IYD1 628 aaKnown RBP1.76□□□□□ -2.13
XRN1-214ENST00000498077 SPATA5Q8NB90 893 aa1.76□□□□□ -2.13
XRN1-214ENST00000498077 BANK1Q8NDB2 785 aa1.76□□□□□ -2.13
XRN1-214ENST00000498077 TCHPQ9BT92 498 aa1.76□□□□□ -2.13
XRN1-214ENST00000498077 APOL5Q9BWW9 433 aa1.76□□□□□ -2.13
XRN1-214ENST00000498077 RXFP1Q9HBX9 757 aa1.76□□□□□ -2.13
XRN1-214ENST00000498077 ATP13A2Q9NQ11 1180 aa1.76□□□□□ -2.13
XRN1-214ENST00000498077 ANO2Q9NQ90 1003 aa1.76□□□□□ -2.13
XRN1-214ENST00000498077 NOP53Q9NZM5 478 aaKnown RBP1.76□□□□□ -2.13
XRN1-214ENST00000498077 NXF1Q9UBU9 619 aaKnown RBP1.76□□□□□ -2.13
XRN1-214ENST00000498077 R3HCC1Q9Y3T6 440 aaKnown RBP1.76□□□□□ -2.13
XRN1-214ENST00000498077 PLCH2O75038 1416 aa1.76□□□□□ -2.13
XRN1-214ENST00000498077 PRAMEF33A0A0G2JMD5 474 aa1.75□□□□□ -2.13
XRN1-214ENST00000498077 A0A1B0GUL7 405 aa1.75□□□□□ -2.13
XRN1-214ENST00000498077 GOLGA6L9A6NEM1 432 aa1.75□□□□□ -2.13
XRN1-214ENST00000498077 TSHRP16473 764 aa1.75□□□□□ -2.13
XRN1-214ENST00000498077 RRADP55042 308 aa1.75□□□□□ -2.13
XRN1-214ENST00000498077 SFSWAPQ12872 951 aaKnown RBP1.75□□□□□ -2.13
XRN1-214ENST00000498077 TRIM32Q13049 653 aa1.75□□□□□ -2.13
XRN1-214ENST00000498077 HSP90AA5PQ58FG0 334 aa1.75□□□□□ -2.13
XRN1-214ENST00000498077 PRRT3Q5FWE3 981 aa1.75□□□□□ -2.13
XRN1-214ENST00000498077 LYPD8Q6UX82 237 aa1.75□□□□□ -2.13
XRN1-214ENST00000498077 FAM83HQ6ZRV2 1179 aaPredicted RBP1.75□□□□□ -2.13
XRN1-214ENST00000498077 DENND5BQ6ZUT9 1274 aa1.75□□□□□ -2.13
XRN1-214ENST00000498077 CTU1Q7Z7A3 348 aaKnown RBP1.75□□□□□ -2.13
XRN1-214ENST00000498077 P3H2Q8IVL5 708 aa1.75□□□□□ -2.13
XRN1-214ENST00000498077 BEND7Q8N7W2 519 aaPredicted RBP1.75□□□□□ -2.13
XRN1-214ENST00000498077 PPM1NQ8N819 430 aa1.75□□□□□ -2.13
XRN1-214ENST00000498077 RBMXL1Q96E39 390 aaKnown RBP1.75□□□□□ -2.13
XRN1-214ENST00000498077 HOOK2Q96ED9 719 aa1.75□□□□□ -2.13
XRN1-214ENST00000498077 ERO1AQ96HE7 468 aa1.75□□□□□ -2.13
XRN1-214ENST00000498077 TRAPPC9Q96Q05 1148 aa1.75□□□□□ -2.13
XRN1-214ENST00000498077 BEX2Q9BXY8 128 aa1.75□□□□□ -2.13
XRN1-214ENST00000498077 L1RE1Q9UN81 338 aa1.75□□□□□ -2.13
XRN1-214ENST00000498077 FAN1Q9Y2M0 1017 aa1.75□□□□□ -2.13
XRN1-214ENST00000498077 MAP4K5Q9Y4K4 846 aa1.75□□□□□ -2.13
XRN1-214ENST00000498077 PKD1L3Q7Z443 1732 aa1.75□□□□□ -2.13
XRN1-214ENST00000498077 RRBP1Q9P2E9 1410 aaKnown RBP1.75□□□□□ -2.13
XRN1-214ENST00000498077 RASSF10A6NK89 507 aa1.75□□□□□ -2.13
XRN1-214ENST00000498077 RASA4BC9J798 803 aa1.75□□□□□ -2.13
XRN1-214ENST00000498077 PRC1O43663 620 aa1.75□□□□□ -2.13
XRN1-214ENST00000498077 CCDC22O60826 627 aa1.75□□□□□ -2.13
XRN1-214ENST00000498077 CPNE6O95741 557 aa1.75□□□□□ -2.13
XRN1-214ENST00000498077 CHGBP05060 677 aa1.75□□□□□ -2.13
XRN1-214ENST00000498077 GNA15P30679 374 aa1.75□□□□□ -2.13
XRN1-214ENST00000498077 FLIIQ13045 1269 aa1.75□□□□□ -2.13
XRN1-214ENST00000498077 EZH2Q15910 746 aaKnown RBP1.75□□□□□ -2.13
XRN1-214ENST00000498077 PALB2Q86YC2 1186 aa1.75□□□□□ -2.13
XRN1-214ENST00000498077 AMOTL1Q8IY63 956 aa1.75□□□□□ -2.13
XRN1-214ENST00000498077 TRIM47Q96LD4 638 aa1.75□□□□□ -2.13
XRN1-214ENST00000498077 PNMA5Q96PV4 448 aa1.75□□□□□ -2.13
XRN1-214ENST00000498077 AGXT2Q9BYV1 514 aa1.75□□□□□ -2.13
XRN1-214ENST00000498077 PIH1D3Q9NQM4 214 aaKnown RBP1.75□□□□□ -2.13
XRN1-214ENST00000498077 PCDHA10Q9Y5I2 948 aa1.75□□□□□ -2.13
XRN1-214ENST00000498077 ZNF518AQ6AHZ1 1483 aa1.75□□□□□ -2.13
XRN1-214ENST00000498077 CNTNAP2Q9UHC6 1331 aa1.75□□□□□ -2.13
XRN1-214ENST00000498077 LRRC37A3O60309 1634 aa1.75□□□□□ -2.13
XRN1-214ENST00000498077 TOP3BO95985 862 aaKnown RBP1.75□□□□□ -2.13
XRN1-214ENST00000498077 EGFRP00533 1210 aa1.75□□□□□ -2.13
XRN1-214ENST00000498077 RHOXF2BP0C7M4 288 aa1.75□□□□□ -2.13
XRN1-214ENST00000498077 GLB1P16278 677 aa1.75□□□□□ -2.13
XRN1-214ENST00000498077 RAP1GAPP47736 663 aa1.75□□□□□ -2.13
XRN1-214ENST00000498077 SOX10P56693 466 aa1.75□□□□□ -2.13
XRN1-214ENST00000498077 WDR4P57081 412 aaKnown RBP1.75□□□□□ -2.13
XRN1-214ENST00000498077 SEMA3BQ13214 749 aa1.75□□□□□ -2.13
XRN1-214ENST00000498077 IZUMO4Q1ZYL8 232 aa1.75□□□□□ -2.13
XRN1-214ENST00000498077 WASHC4Q2M389 1173 aa1.75□□□□□ -2.13
XRN1-214ENST00000498077 PLEKHG4Q58EX7 1191 aa1.75□□□□□ -2.13
XRN1-214ENST00000498077 KRT40Q6A162 431 aa1.75□□□□□ -2.13
XRN1-214ENST00000498077 TMEM199Q8N511 208 aa1.75□□□□□ -2.13
XRN1-214ENST00000498077 PCYOX1LQ8NBM8 494 aa1.75□□□□□ -2.13
XRN1-214ENST00000498077 RHOXF2Q9BQY4 288 aa1.75□□□□□ -2.13
XRN1-214ENST00000498077 KRTAP9-8Q9BYQ0 159 aa1.75□□□□□ -2.13
XRN1-214ENST00000498077 SH2B1Q9NRF2 756 aaPredicted RBP1.75□□□□□ -2.13
XRN1-214ENST00000498077 ST3GAL5Q9UNP4 418 aa1.75□□□□□ -2.13
XRN1-214ENST00000498077 SUGT1Q9Y2Z0 365 aa1.75□□□□□ -2.13
XRN1-214ENST00000498077 MLH3Q9UHC1 1453 aa1.75□□□□□ -2.13
XRN1-214ENST00000498077 GPATCH8Q9UKJ3 1502 aaKnown RBP1.75□□□□□ -2.13
XRN1-214ENST00000498077 TNRQ92752 1358 aa1.75□□□□□ -2.13
XRN1-214ENST00000498077 PLEKHG1Q9ULL1 1385 aa1.75□□□□□ -2.13
XRN1-214ENST00000498077 RFXAPO00287 272 aa1.75□□□□□ -2.13
XRN1-214ENST00000498077 HOXA2O43364 376 aa1.75□□□□□ -2.13
XRN1-214ENST00000498077 SUSD5O60279 629 aa1.75□□□□□ -2.13
XRN1-214ENST00000498077 QDPRP09417 244 aa1.75□□□□□ -2.13
XRN1-214ENST00000498077 TATP17735 454 aaPredicted RBP1.75□□□□□ -2.13
XRN1-214ENST00000498077 RAB25P57735 213 aa1.75□□□□□ -2.13
XRN1-214ENST00000498077 MLECQ14165 292 aa1.75□□□□□ -2.13
XRN1-214ENST00000498077 NCAPHQ15003 741 aa1.75□□□□□ -2.13
XRN1-214ENST00000498077 SLC27A3Q5K4L6 730 aa1.75□□□□□ -2.13
XRN1-214ENST00000498077 PRAMEF19Q5SWL8 479 aa1.75□□□□□ -2.13
XRN1-214ENST00000498077 PHF19Q5T6S3 580 aa1.75□□□□□ -2.13
XRN1-214ENST00000498077 RINT1Q6NUQ1 792 aa1.75□□□□□ -2.13
XRN1-214ENST00000498077 NANOGNBQ7Z5D8 188 aa1.75□□□□□ -2.13
XRN1-214ENST00000498077 RHOXF1Q8NHV9 184 aa1.75□□□□□ -2.13
XRN1-214ENST00000498077 SCYL1Q96KG9 808 aa1.75□□□□□ -2.13
XRN1-214ENST00000498077 ABCD2Q9UBJ2 740 aa1.75□□□□□ -2.13
XRN1-214ENST00000498077 SFMBT1Q9UHJ3 866 aa1.75□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms