RNA–Protein interactions for RNA: ENST00000497960.5

NUP50-219, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 986 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-219ENST00000497960 RAB11FIP3O75154 756 aa18.72■□□□□ 0.59
NUP50-219ENST00000497960 CYP2E1P05181 493 aaPredicted RBP18.72■□□□□ 0.59
NUP50-219ENST00000497960 GTF2A2P52657 109 aa18.72■□□□□ 0.59
NUP50-219ENST00000497960 RHBDL3P58872 404 aa18.72■□□□□ 0.59
NUP50-219ENST00000497960 PICALMQ13492 652 aa18.72■□□□□ 0.59
NUP50-219ENST00000497960 CNKSR2Q8WXI2 1034 aa18.72■□□□□ 0.59
NUP50-219ENST00000497960 CFHR5Q9BXR6 569 aa18.72■□□□□ 0.59
NUP50-219ENST00000497960 MCOLN1Q9GZU1 580 aa18.72■□□□□ 0.59
NUP50-219ENST00000497960 SNCAIPQ9Y6H5 919 aa18.72■□□□□ 0.59
NUP50-219ENST00000497960 OTOFQ9HC10 1997 aa18.72■□□□□ 0.59
NUP50-219ENST00000497960 TESPA1A2RU30 521 aaPredicted RBP18.71■□□□□ 0.59
NUP50-219ENST00000497960 GPR25O00155 361 aa18.71■□□□□ 0.59
NUP50-219ENST00000497960 IGF2BP3O00425 579 aaKnown RBP eCLIP18.71■□□□□ 0.59
NUP50-219ENST00000497960 NPM3O75607 178 aaKnown RBP18.71■□□□□ 0.59
NUP50-219ENST00000497960 BAG3O95817 575 aa18.71■□□□□ 0.59
NUP50-219ENST00000497960 INPP5BP32019 993 aa18.71■□□□□ 0.59
NUP50-219ENST00000497960 NOM1Q5C9Z4 860 aaKnown RBP18.71■□□□□ 0.59
NUP50-219ENST00000497960 DDX4Q9NQI0 724 aaKnown RBP18.71■□□□□ 0.59
NUP50-219ENST00000497960 ZNF112Q9UJU3 913 aa18.71■□□□□ 0.59
NUP50-219ENST00000497960 RFX7Q2KHR2 1363 aa18.7■□□□□ 0.58
NUP50-219ENST00000497960 IFIT2P09913 472 aaKnown RBP18.7■□□□□ 0.58
NUP50-219ENST00000497960 PLCG2P16885 1265 aa18.7■□□□□ 0.58
NUP50-219ENST00000497960 IRX6P78412 446 aaPredicted RBP18.7■□□□□ 0.58
NUP50-219ENST00000497960 TEX11Q8IYF3 940 aa18.7■□□□□ 0.58
NUP50-219ENST00000497960 ZNF296Q8WUU4 475 aaPredicted RBP18.7■□□□□ 0.58
NUP50-219ENST00000497960 MS4A4AQ96JQ5 239 aa18.7■□□□□ 0.58
NUP50-219ENST00000497960 BCL11AQ9H165 835 aa18.7■□□□□ 0.58
NUP50-219ENST00000497960 PIH1D3Q9NQM4 214 aaKnown RBP18.7■□□□□ 0.58
NUP50-219ENST00000497960 CCL15-CCL14A0A0B4J2E2 113 aa18.69■□□□□ 0.58
NUP50-219ENST00000497960 PPIL2Q13356 520 aa18.69■□□□□ 0.58
NUP50-219ENST00000497960 CCL15Q16663 113 aa18.69■□□□□ 0.58
NUP50-219ENST00000497960 CTU1Q7Z7A3 348 aaKnown RBP18.69■□□□□ 0.58
NUP50-219ENST00000497960 DDTLA6NHG4 134 aaPredicted RBP18.68■□□□□ 0.58
NUP50-219ENST00000497960 FKTNO75072 461 aa18.68■□□□□ 0.58
NUP50-219ENST00000497960 IDH1O75874 414 aaKnown RBP18.68■□□□□ 0.58
NUP50-219ENST00000497960 CETPP11597 493 aa18.68■□□□□ 0.58
NUP50-219ENST00000497960 PPATQ06203 517 aa18.68■□□□□ 0.58
NUP50-219ENST00000497960 SNAPC2Q13487 334 aa18.68■□□□□ 0.58
NUP50-219ENST00000497960 SH3BP5LQ7L8J4 393 aa18.68■□□□□ 0.58
NUP50-219ENST00000497960 BRI3BPQ8WY22 251 aa18.68■□□□□ 0.58
NUP50-219ENST00000497960 PTPN18Q99952 460 aa18.68■□□□□ 0.58
NUP50-219ENST00000497960 R3HDMLQ9H3Y0 253 aa18.68■□□□□ 0.58
NUP50-219ENST00000497960 AATFQ9NY61 560 aaKnown RBP eCLIP18.68■□□□□ 0.58
NUP50-219ENST00000497960 IRF6O14896 467 aa18.67■□□□□ 0.58
NUP50-219ENST00000497960 PPP4CP60510 307 aa18.67■□□□□ 0.58
NUP50-219ENST00000497960 MAP3K12Q12852 859 aa18.67■□□□□ 0.58
NUP50-219ENST00000497960 NOL9Q5SY16 702 aaKnown RBP18.67■□□□□ 0.58
NUP50-219ENST00000497960 SH3RF3Q8TEJ3 882 aaPredicted RBP18.67■□□□□ 0.58
NUP50-219ENST00000497960 CYP7A1P22680 504 aa18.66■□□□□ 0.58
NUP50-219ENST00000497960 CRHR2Q13324 411 aa18.66■□□□□ 0.58
NUP50-219ENST00000497960 TTF1Q15361 905 aaPredicted RBP18.66■□□□□ 0.58
NUP50-219ENST00000497960 OSBPL5Q9H0X9 879 aaPredicted RBP18.66■□□□□ 0.58
NUP50-219ENST00000497960 PICK1Q9NRD5 415 aa18.66■□□□□ 0.58
NUP50-219ENST00000497960 ATRNL1Q5VV63 1379 aa18.66■□□□□ 0.58
NUP50-219ENST00000497960 CCDC85CA6NKD9 419 aa18.65■□□□□ 0.58
NUP50-219ENST00000497960 PHF20L1A8MW92 1017 aa18.65■□□□□ 0.58
NUP50-219ENST00000497960 TBC1D12O60347 775 aa18.65■□□□□ 0.58
NUP50-219ENST00000497960 MAP3K10Q02779 954 aa18.65■□□□□ 0.58
NUP50-219ENST00000497960 TAF1CQ15572 869 aaPredicted RBP18.65■□□□□ 0.58
NUP50-219ENST00000497960 TMED8Q6PL24 325 aaPredicted RBP18.65■□□□□ 0.58
NUP50-219ENST00000497960 SCYL3Q8IZE3 742 aa18.65■□□□□ 0.58
NUP50-219ENST00000497960 EXOC6Q8TAG9 804 aa18.65■□□□□ 0.58
NUP50-219ENST00000497960 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.65■□□□□ 0.58
NUP50-219ENST00000497960 NDUFB9Q9Y6M9 179 aa18.65■□□□□ 0.58
NUP50-219ENST00000497960 LAMB1P07942 1786 aa18.64■□□□□ 0.57
NUP50-219ENST00000497960 PKN2Q16513 984 aaKnown RBP18.64■□□□□ 0.57
NUP50-219ENST00000497960 ADGRA1Q86SQ6 560 aa18.64■□□□□ 0.57
NUP50-219ENST00000497960 CERS3Q8IU89 383 aa18.64■□□□□ 0.57
NUP50-219ENST00000497960 MAGEB6Q8N7X4 407 aa18.64■□□□□ 0.57
NUP50-219ENST00000497960 LRRCC1Q9C099 1032 aa18.64■□□□□ 0.57
NUP50-219ENST00000497960 ANTXR1Q9H6X2 564 aa18.64■□□□□ 0.57
NUP50-219ENST00000497960 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.64■□□□□ 0.57
NUP50-219ENST00000497960 ZFYVE28Q9HCC9 887 aa18.64■□□□□ 0.57
NUP50-219ENST00000497960 CTNND1O60716 968 aaKnown RBP18.63■□□□□ 0.57
NUP50-219ENST00000497960 NEFLP07196 543 aa18.63■□□□□ 0.57
NUP50-219ENST00000497960 FAM43AQ8N2R8 423 aa18.63■□□□□ 0.57
NUP50-219ENST00000497960 TGFBRAP1Q8WUH2 860 aa18.63■□□□□ 0.57
NUP50-219ENST00000497960 DNAJC2Q99543 621 aaKnown RBP18.63■□□□□ 0.57
NUP50-219ENST00000497960 DHX36Q9H2U1 1008 aaKnown RBP18.63■□□□□ 0.57
NUP50-219ENST00000497960 ZCCHC17Q9NP64 241 aaKnown RBP18.63■□□□□ 0.57
NUP50-219ENST00000497960 KCNH4Q9UQ05 1017 aa18.63■□□□□ 0.57
NUP50-219ENST00000497960 COL2A1P02458 1487 aaPredicted RBP18.63■□□□□ 0.57
NUP50-219ENST00000497960 MAST2Q6P0Q8 1798 aa18.63■□□□□ 0.57
NUP50-219ENST00000497960 DOCK2Q92608 1830 aa18.63■□□□□ 0.57
NUP50-219ENST00000497960 BTBD19C9JJ37 291 aa18.62■□□□□ 0.57
NUP50-219ENST00000497960 MAPKAPK5Q8IW41 473 aa18.62■□□□□ 0.57
NUP50-219ENST00000497960 PI4KBQ9UBF8 816 aa18.62■□□□□ 0.57
NUP50-219ENST00000497960 CXCL11O14625 94 aa18.61■□□□□ 0.57
NUP50-219ENST00000497960 SLURP2P0DP57 97 aa18.61■□□□□ 0.57
NUP50-219ENST00000497960 PTPRAP18433 802 aa18.61■□□□□ 0.57
NUP50-219ENST00000497960 DYNLL1P63167 89 aaKnown RBP18.61■□□□□ 0.57
NUP50-219ENST00000497960 AAMPQ13685 434 aa18.61■□□□□ 0.57
NUP50-219ENST00000497960 MIGA1Q8NAN2 632 aa18.61■□□□□ 0.57
NUP50-219ENST00000497960 ERO1AQ96HE7 468 aa18.61■□□□□ 0.57
NUP50-219ENST00000497960 HERC5Q9UII4 1024 aaKnown RBP18.61■□□□□ 0.57
NUP50-219ENST00000497960 ZHX2Q9Y6X8 837 aa18.61■□□□□ 0.57
NUP50-219ENST00000497960 FLT1P17948 1338 aa18.6■□□□□ 0.57
NUP50-219ENST00000497960 GOLIM4O00461 696 aa18.6■□□□□ 0.57
NUP50-219ENST00000497960 SP3Q02447 781 aa18.6■□□□□ 0.57
NUP50-219ENST00000497960 TRIM34Q9BYJ4 488 aa18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms