RNA–Protein interactions for RNA: ENST00000497527.1

HPS1-213, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

TSL 3

Gene HPS1, Length 536 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-213ENST00000497527 PDE4BQ07343 736 aa14.36□□□□□ -0.11
HPS1-213ENST00000497527 TOB2Q14106 344 aaPredicted RBP14.36□□□□□ -0.11
HPS1-213ENST00000497527 CERS5Q8N5B7 392 aa14.36□□□□□ -0.11
HPS1-213ENST00000497527 SH3RF3Q8TEJ3 882 aaPredicted RBP14.36□□□□□ -0.11
HPS1-213ENST00000497527 JDP2Q8WYK2 163 aa14.36□□□□□ -0.11
HPS1-213ENST00000497527 ESR2Q92731 530 aa14.36□□□□□ -0.11
HPS1-213ENST00000497527 ZNF287Q9HBT7 754 aa14.36□□□□□ -0.11
HPS1-213ENST00000497527 BCS1LQ9Y276 419 aa14.36□□□□□ -0.11
HPS1-213ENST00000497527 DICER1Q9UPY3 1922 aaKnown RBP14.36□□□□□ -0.11
HPS1-213ENST00000497527 ERICH2A1L162 156 aa14.35□□□□□ -0.11
HPS1-213ENST00000497527 USP17L12C9JPN9 530 aa14.35□□□□□ -0.11
HPS1-213ENST00000497527 USP17L21D6R901 530 aa14.35□□□□□ -0.11
HPS1-213ENST00000497527 F8W031 263 aaPredicted RBP14.35□□□□□ -0.11
HPS1-213ENST00000497527 DDIT3P35638 169 aa14.35□□□□□ -0.11
HPS1-213ENST00000497527 CTDSPL2Q05D32 466 aa14.35□□□□□ -0.11
HPS1-213ENST00000497527 CTR9Q6PD62 1173 aa14.35□□□□□ -0.11
HPS1-213ENST00000497527 BRF1Q92994 677 aa14.35□□□□□ -0.11
HPS1-213ENST00000497527 ZNF274Q96GC6 653 aaPredicted RBP14.35□□□□□ -0.11
HPS1-213ENST00000497527 TCEANC2Q96MN5 208 aa14.35□□□□□ -0.11
HPS1-213ENST00000497527 NBPF3Q9H094 633 aa14.35□□□□□ -0.11
HPS1-213ENST00000497527 TOMM22Q9NS69 142 aa14.35□□□□□ -0.11
HPS1-213ENST00000497527 MCM9Q9NXL9 1143 aa14.35□□□□□ -0.11
HPS1-213ENST00000497527 SERPINA10Q9UK55 444 aa14.35□□□□□ -0.11
HPS1-213ENST00000497527 HDAC9Q9UKV0 1011 aa14.35□□□□□ -0.11
HPS1-213ENST00000497527 TPCN1Q9ULQ1 816 aa14.35□□□□□ -0.11
HPS1-213ENST00000497527 ZNRF3Q9ULT6 936 aa14.35□□□□□ -0.11
HPS1-213ENST00000497527 B4E1Z4 1266 aa14.34□□□□□ -0.11
HPS1-213ENST00000497527 FGRP09769 529 aa14.34□□□□□ -0.11
HPS1-213ENST00000497527 CRKP46108 304 aa14.34□□□□□ -0.11
HPS1-213ENST00000497527 EVCP57679 992 aa14.34□□□□□ -0.11
HPS1-213ENST00000497527 ME3Q16798 604 aa14.34□□□□□ -0.11
HPS1-213ENST00000497527 ZDHHC15Q96MV8 337 aa14.34□□□□□ -0.11
HPS1-213ENST00000497527 ZNF277Q9NRM2 450 aaPredicted RBP14.34□□□□□ -0.11
HPS1-213ENST00000497527 FOXD4L1Q9NU39 408 aa14.34□□□□□ -0.11
HPS1-213ENST00000497527 TAOK2Q9UL54 1235 aa14.34□□□□□ -0.11
HPS1-213ENST00000497527 ANGEL1Q9UNK9 670 aaKnown RBP14.34□□□□□ -0.11
HPS1-213ENST00000497527 SMC3Q9UQE7 1217 aa14.34□□□□□ -0.11
HPS1-213ENST00000497527 NEDD4P46934 1319 aa14.34□□□□□ -0.11
HPS1-213ENST00000497527 ROBO3Q96MS0 1386 aa14.34□□□□□ -0.11
HPS1-213ENST00000497527 ADAMTSL1Q8N6G6 1762 aa14.33□□□□□ -0.12
HPS1-213ENST00000497527 ORC4O43929 436 aa14.33□□□□□ -0.12
HPS1-213ENST00000497527 DHX16O60231 1041 aaKnown RBP14.33□□□□□ -0.12
HPS1-213ENST00000497527 PFKFB2O60825 505 aa14.33□□□□□ -0.12
HPS1-213ENST00000497527 POLR3DP05423 398 aaPredicted RBP14.33□□□□□ -0.12
HPS1-213ENST00000497527 LIFRP42702 1097 aa14.33□□□□□ -0.12
HPS1-213ENST00000497527 RHBDL3P58872 404 aa14.33□□□□□ -0.12
HPS1-213ENST00000497527 C12orf60Q5U649 245 aa14.33□□□□□ -0.12
HPS1-213ENST00000497527 RSBN1LQ6PCB5 846 aaPredicted RBP14.33□□□□□ -0.12
HPS1-213ENST00000497527 KIAA0825Q8IV33 1275 aa14.33□□□□□ -0.12
HPS1-213ENST00000497527 TMTC2Q8N394 836 aa14.33□□□□□ -0.12
HPS1-213ENST00000497527 AGBL3Q8NEM8 1001 aa14.33□□□□□ -0.12
HPS1-213ENST00000497527 TGFBRAP1Q8WUH2 860 aa14.33□□□□□ -0.12
HPS1-213ENST00000497527 LLPHQ9BRT6 129 aaKnown RBP14.33□□□□□ -0.12
HPS1-213ENST00000497527 MKRN1Q9UHC7 482 aaKnown RBP14.33□□□□□ -0.12
HPS1-213ENST00000497527 KIF3AQ9Y496 699 aa14.33□□□□□ -0.12
HPS1-213ENST00000497527 YDJCA8MPS7 323 aa14.32□□□□□ -0.12
HPS1-213ENST00000497527 KDM4AO75164 1064 aa14.32□□□□□ -0.12
HPS1-213ENST00000497527 VIL1P09327 827 aaKnown RBP14.32□□□□□ -0.12
HPS1-213ENST00000497527 CCDC178Q5BJE1 867 aa14.32□□□□□ -0.12
HPS1-213ENST00000497527 RRP12Q5JTH9 1297 aaKnown RBP14.32□□□□□ -0.12
HPS1-213ENST00000497527 TTC6Q86TZ1 520 aa14.32□□□□□ -0.12
HPS1-213ENST00000497527 IQCA1Q86XH1 822 aa14.32□□□□□ -0.12
HPS1-213ENST00000497527 CCDC83Q8IWF9 413 aa14.32□□□□□ -0.12
HPS1-213ENST00000497527 GTF3C6Q969F1 213 aa14.32□□□□□ -0.12
HPS1-213ENST00000497527 UBAC1Q9BSL1 405 aa14.32□□□□□ -0.12
HPS1-213ENST00000497527 FLT1P17948 1338 aa14.32□□□□□ -0.12
HPS1-213ENST00000497527 SH2B2O14492 632 aaPredicted RBP14.31□□□□□ -0.12
HPS1-213ENST00000497527 IFIT3O14879 490 aaKnown RBP14.31□□□□□ -0.12
HPS1-213ENST00000497527 NPM3O75607 178 aaKnown RBP14.31□□□□□ -0.12
HPS1-213ENST00000497527 LARGE1O95461 756 aa14.31□□□□□ -0.12
HPS1-213ENST00000497527 PDCP20941 246 aa14.31□□□□□ -0.12
HPS1-213ENST00000497527 SCNN1DP51172 638 aa14.31□□□□□ -0.12
HPS1-213ENST00000497527 RBM5P52756 815 aaKnown RBP eCLIP14.31□□□□□ -0.12
HPS1-213ENST00000497527 RCAN1P53805 252 aa14.31□□□□□ -0.12
HPS1-213ENST00000497527 ANTXR2P58335 489 aa14.31□□□□□ -0.12
HPS1-213ENST00000497527 APOBRQ0VD83 1088 aa14.31□□□□□ -0.12
HPS1-213ENST00000497527 TNIP1Q15025 636 aa14.31□□□□□ -0.12
HPS1-213ENST00000497527 TMEM67Q5HYA8 995 aa14.31□□□□□ -0.12
HPS1-213ENST00000497527 CIAPIN1Q6FI81 312 aa14.31□□□□□ -0.12
HPS1-213ENST00000497527 SYNE3Q6ZMZ3 975 aa14.31□□□□□ -0.12
HPS1-213ENST00000497527 SGMS1Q86VZ5 419 aa14.31□□□□□ -0.12
HPS1-213ENST00000497527 MAPKAPK5Q8IW41 473 aa14.31□□□□□ -0.12
HPS1-213ENST00000497527 OGFOD1Q8N543 542 aa14.31□□□□□ -0.12
HPS1-213ENST00000497527 MXD3Q9BW11 206 aa14.31□□□□□ -0.12
HPS1-213ENST00000497527 LRRC2Q9BYS8 371 aa14.31□□□□□ -0.12
HPS1-213ENST00000497527 KCNQ5Q9NR82 932 aa14.31□□□□□ -0.12
HPS1-213ENST00000497527 USP40Q9NVE5 1235 aa14.31□□□□□ -0.12
HPS1-213ENST00000497527 ZSWIM5Q9P217 1185 aa14.31□□□□□ -0.12
HPS1-213ENST00000497527 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.31□□□□□ -0.12
HPS1-213ENST00000497527 NFKBIEO00221 500 aa14.3□□□□□ -0.12
HPS1-213ENST00000497527 RANBP6O60518 1105 aaKnown RBP14.3□□□□□ -0.12
HPS1-213ENST00000497527 USP17L8P0C7I0 530 aa14.3□□□□□ -0.12
HPS1-213ENST00000497527 HMGN5P82970 282 aaKnown RBP14.3□□□□□ -0.12
HPS1-213ENST00000497527 WTAPQ15007 396 aa14.3□□□□□ -0.12
HPS1-213ENST00000497527 RAB3GAP1Q15042 981 aa14.3□□□□□ -0.12
HPS1-213ENST00000497527 CYB5R4Q7L1T6 521 aa14.3□□□□□ -0.12
HPS1-213ENST00000497527 CHST3Q7LGC8 479 aa14.3□□□□□ -0.12
HPS1-213ENST00000497527 LARP6Q9BRS8 491 aaKnown RBP14.3□□□□□ -0.12
HPS1-213ENST00000497527 TMOD2Q9NZR1 351 aa14.3□□□□□ -0.12
HPS1-213ENST00000497527 NAP1L2Q9ULW6 460 aaPredicted RBP14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms