RNA–Protein interactions for RNA: ENST00000497018.1

UBR4-217, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 183 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-217ENST00000497018 USP20Q9Y2K6 914 aa2.46□□□□□ -2.02
UBR4-217ENST00000497018 FCF1Q9Y324 198 aaKnown RBP2.46□□□□□ -2.02
UBR4-217ENST00000497018 MRPS23Q9Y3D9 190 aaKnown RBP2.46□□□□□ -2.02
UBR4-217ENST00000497018 PARP3Q9Y6F1 533 aa2.46□□□□□ -2.02
UBR4-217ENST00000497018 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP2.46□□□□□ -2.02
UBR4-217ENST00000497018 TOPBP1Q92547 1522 aa2.46□□□□□ -2.02
UBR4-217ENST00000497018 NHSL1Q5SYE7 1610 aa2.46□□□□□ -2.02
UBR4-217ENST00000497018 SUPT6HQ7KZ85 1726 aaKnown RBP2.45□□□□□ -2.02
UBR4-217ENST00000497018 PTPRKQ15262 1439 aa2.45□□□□□ -2.02
UBR4-217ENST00000497018 CUL7Q14999 1698 aa2.45□□□□□ -2.02
UBR4-217ENST00000497018 DNAJC25-GNG10A0A024R161 153 aa2.45□□□□□ -2.02
UBR4-217ENST00000497018 CCDC163A0A0D9SF12 145 aa2.45□□□□□ -2.02
UBR4-217ENST00000497018 TMEM238LA0A1B0GVL6 79 aa2.45□□□□□ -2.02
UBR4-217ENST00000497018 A0A1W2PQH9 124 aa2.45□□□□□ -2.02
UBR4-217ENST00000497018 E2F8A0AVK6 867 aa2.45□□□□□ -2.02
UBR4-217ENST00000497018 MEIS3P2A8K0S8 358 aa2.45□□□□□ -2.02
UBR4-217ENST00000497018 GABRDO14764 452 aa2.45□□□□□ -2.02
UBR4-217ENST00000497018 PLD2O14939 933 aa2.45□□□□□ -2.02
UBR4-217ENST00000497018 TBX3O15119 743 aa2.45□□□□□ -2.02
UBR4-217ENST00000497018 TLR3O15455 904 aaKnown RBP2.45□□□□□ -2.02
UBR4-217ENST00000497018 GPR39O43194 453 aa2.45□□□□□ -2.02
UBR4-217ENST00000497018 CILPO75339 1184 aa2.45□□□□□ -2.02
UBR4-217ENST00000497018 PAGE1O75459 146 aa2.45□□□□□ -2.02
UBR4-217ENST00000497018 CD2BP2O95400 341 aaKnown RBP2.45□□□□□ -2.02
UBR4-217ENST00000497018 EGFRP00533 1210 aa2.45□□□□□ -2.02
UBR4-217ENST00000497018 ADH1AP07327 375 aa2.45□□□□□ -2.02
UBR4-217ENST00000497018 IMPDH2P12268 514 aa2.45□□□□□ -2.02
UBR4-217ENST00000497018 SDSP20132 328 aa2.45□□□□□ -2.02
UBR4-217ENST00000497018 ITPKAP23677 461 aa2.45□□□□□ -2.02
UBR4-217ENST00000497018 SERPINB3P29508 390 aa2.45□□□□□ -2.02
UBR4-217ENST00000497018 MAN1A1P33908 653 aa2.45□□□□□ -2.02
UBR4-217ENST00000497018 ARSDP51689 593 aa2.45□□□□□ -2.02
UBR4-217ENST00000497018 CLCQ05315 142 aa2.45□□□□□ -2.02
UBR4-217ENST00000497018 LMOD3Q0VAK6 560 aa2.45□□□□□ -2.02
UBR4-217ENST00000497018 GALEQ14376 348 aa2.45□□□□□ -2.02
UBR4-217ENST00000497018 FNDC3BQ53EP0 1204 aaKnown RBP2.45□□□□□ -2.02
UBR4-217ENST00000497018 ZC3H12BQ5HYM0 836 aaKnown RBP2.45□□□□□ -2.02
UBR4-217ENST00000497018 PPP1R26Q5T8A7 1209 aaPredicted RBP2.45□□□□□ -2.02
UBR4-217ENST00000497018 RASIP1Q5U651 963 aa2.45□□□□□ -2.02
UBR4-217ENST00000497018 TTBK2Q6IQ55 1244 aa2.45□□□□□ -2.02
UBR4-217ENST00000497018 NBPF10Q6P3W6 841 aaKnown RBP2.45□□□□□ -2.02
UBR4-217ENST00000497018 THSD4Q6ZMP0 1018 aa2.45□□□□□ -2.02
UBR4-217ENST00000497018 FAM43BQ6ZT52 329 aaPredicted RBP2.45□□□□□ -2.02
UBR4-217ENST00000497018 REC114Q7Z4M0 266 aa2.45□□□□□ -2.02
UBR4-217ENST00000497018 MPNDQ8N594 471 aa2.45□□□□□ -2.02
UBR4-217ENST00000497018 ZBTB38Q8NAP3 1195 aaPredicted RBP2.45□□□□□ -2.02
UBR4-217ENST00000497018 ZNF280CQ8ND82 737 aa2.45□□□□□ -2.02
UBR4-217ENST00000497018 MYRIPQ8NFW9 859 aa2.45□□□□□ -2.02
UBR4-217ENST00000497018 GATAD2BQ8WXI9 593 aa2.45□□□□□ -2.02
UBR4-217ENST00000497018 GAL3ST3Q96A11 431 aa2.45□□□□□ -2.02
UBR4-217ENST00000497018 RUNDC1Q96C34 613 aa2.45□□□□□ -2.02
UBR4-217ENST00000497018 HOOK2Q96ED9 719 aa2.45□□□□□ -2.02
UBR4-217ENST00000497018 HSH2DQ96JZ2 352 aa2.45□□□□□ -2.02
UBR4-217ENST00000497018 SUSD3Q96L08 255 aa2.45□□□□□ -2.02
UBR4-217ENST00000497018 CLUHP3Q96NS8 147 aa2.45□□□□□ -2.02
UBR4-217ENST00000497018 NECAB3Q96P71 396 aaPredicted RBP2.45□□□□□ -2.02
UBR4-217ENST00000497018 FERD3LQ96RJ6 166 aa2.45□□□□□ -2.02
UBR4-217ENST00000497018 SLC26A8Q96RN1 970 aa2.45□□□□□ -2.02
UBR4-217ENST00000497018 MTRQ99707 1265 aa2.45□□□□□ -2.02
UBR4-217ENST00000497018 NAP1L4Q99733 375 aaKnown RBP2.45□□□□□ -2.02
UBR4-217ENST00000497018 SPATA9Q9BWV2 254 aa2.45□□□□□ -2.02
UBR4-217ENST00000497018 INO80BQ9C086 356 aaPredicted RBP2.45□□□□□ -2.02
UBR4-217ENST00000497018 EHMT1Q9H9B1 1298 aa2.45□□□□□ -2.02
UBR4-217ENST00000497018 LRRC4BQ9NT99 713 aa2.45□□□□□ -2.02
UBR4-217ENST00000497018 PGPEP1Q9NXJ5 209 aa2.45□□□□□ -2.02
UBR4-217ENST00000497018 CABP1Q9NZU7 370 aa2.45□□□□□ -2.02
UBR4-217ENST00000497018 KLF15Q9UIH9 416 aa2.45□□□□□ -2.02
UBR4-217ENST00000497018 SALL4Q9UJQ4 1053 aa2.45□□□□□ -2.02
UBR4-217ENST00000497018 ANAPC4Q9UJX5 808 aa2.45□□□□□ -2.02
UBR4-217ENST00000497018 RTCBQ9Y3I0 505 aaKnown RBP2.45□□□□□ -2.02
UBR4-217ENST00000497018 GPC6Q9Y625 555 aaPredicted RBP2.45□□□□□ -2.02
UBR4-217ENST00000497018 SCINQ9Y6U3 715 aa2.45□□□□□ -2.02
UBR4-217ENST00000497018 ABCC8Q09428 1581 aa2.44□□□□□ -2.02
UBR4-217ENST00000497018 TTC37Q6PGP7 1564 aa2.44□□□□□ -2.02
UBR4-217ENST00000497018 PEG3Q9GZU2 1588 aa2.44□□□□□ -2.02
UBR4-217ENST00000497018 ZNF335Q9H4Z2 1342 aaPredicted RBP2.44□□□□□ -2.02
UBR4-217ENST00000497018 CUX1P39880 1505 aa2.44□□□□□ -2.02
UBR4-217ENST00000497018 LRRC7Q96NW7 1537 aa2.44□□□□□ -2.02
UBR4-217ENST00000497018 CCER2I3L3R5 266 aa2.44□□□□□ -2.02
UBR4-217ENST00000497018 TCEA3O75764 348 aa2.44□□□□□ -2.02
UBR4-217ENST00000497018 DNAJC8O75937 253 aaPredicted RBP2.44□□□□□ -2.02
UBR4-217ENST00000497018 ATE1O95260 518 aa2.44□□□□□ -2.02
UBR4-217ENST00000497018 CYP2E1P05181 493 aaPredicted RBP2.44□□□□□ -2.02
UBR4-217ENST00000497018 NR3C2P08235 984 aa2.44□□□□□ -2.02
UBR4-217ENST00000497018 POU3F2P20265 443 aaPredicted RBP2.44□□□□□ -2.02
UBR4-217ENST00000497018 ATP4AP20648 1035 aa2.44□□□□□ -2.02
UBR4-217ENST00000497018 ZNF165P49910 485 aa2.44□□□□□ -2.02
UBR4-217ENST00000497018 CENPCQ03188 943 aa2.44□□□□□ -2.02
UBR4-217ENST00000497018 TRIM32Q13049 653 aa2.44□□□□□ -2.02
UBR4-217ENST00000497018 ARID5BQ14865 1188 aa2.44□□□□□ -2.02
UBR4-217ENST00000497018 SETDB1Q15047 1291 aa2.44□□□□□ -2.02
UBR4-217ENST00000497018 SEPT7Q16181 437 aaKnown RBP2.44□□□□□ -2.02
UBR4-217ENST00000497018 HIF1AQ16665 826 aa2.44□□□□□ -2.02
UBR4-217ENST00000497018 CT47A1Q5JQC4 288 aaPredicted RBP2.44□□□□□ -2.02
UBR4-217ENST00000497018 HGSNATQ68CP4 663 aa2.44□□□□□ -2.02
UBR4-217ENST00000497018 PPP4R4Q6NUP7 873 aa2.44□□□□□ -2.02
UBR4-217ENST00000497018 KSR2Q6VAB6 950 aa2.44□□□□□ -2.02
UBR4-217ENST00000497018 TPTE2Q6XPS3 522 aa2.44□□□□□ -2.02
UBR4-217ENST00000497018 RUFY4Q6ZNE9 571 aa2.44□□□□□ -2.02
UBR4-217ENST00000497018 TOGARAM2Q6ZUX3 1019 aa2.44□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 78.9 ms