RNA–Protein interactions for RNA: ENST00000496907.1

HMGCL-206, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 3

Gene HMGCL, Length 858 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-206ENST00000496907 TBC1D10BQ4KMP7 808 aaPredicted RBP7.4□□□□□ -1.22
HMGCL-206ENST00000496907 DACT2Q5SW24 774 aa7.4□□□□□ -1.22
HMGCL-206ENST00000496907 CENPQQ7L2Z9 268 aaPredicted RBP7.4□□□□□ -1.22
HMGCL-206ENST00000496907 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.4□□□□□ -1.22
HMGCL-206ENST00000496907 DCPSQ96C86 337 aaKnown RBP7.4□□□□□ -1.22
HMGCL-206ENST00000496907 SNX27Q96L92 541 aa7.4□□□□□ -1.22
HMGCL-206ENST00000496907 CSRNP1Q96S65 589 aa7.4□□□□□ -1.22
HMGCL-206ENST00000496907 ECHDC1Q9NTX5 307 aa7.4□□□□□ -1.22
HMGCL-206ENST00000496907 SALL1Q9NSC2 1324 aa7.4□□□□□ -1.22
HMGCL-206ENST00000496907 IRS2Q9Y4H2 1338 aa7.4□□□□□ -1.22
HMGCL-206ENST00000496907 POLR2AP24928 1970 aaKnown RBP7.39□□□□□ -1.23
HMGCL-206ENST00000496907 MYH3P11055 1940 aa7.39□□□□□ -1.23
HMGCL-206ENST00000496907 PAPPA2Q9BXP8 1791 aa7.39□□□□□ -1.23
HMGCL-206ENST00000496907 ZNF609O15014 1411 aa7.39□□□□□ -1.23
HMGCL-206ENST00000496907 YDJCA8MPS7 323 aa7.39□□□□□ -1.23
HMGCL-206ENST00000496907 PSMD14O00487 310 aa7.39□□□□□ -1.23
HMGCL-206ENST00000496907 MYO1BO43795 1136 aa7.39□□□□□ -1.23
HMGCL-206ENST00000496907 SLC10A3P09131 477 aa7.39□□□□□ -1.23
HMGCL-206ENST00000496907 NUCB1Q02818 461 aa7.39□□□□□ -1.23
HMGCL-206ENST00000496907 MFSD14BQ5SR56 506 aa7.39□□□□□ -1.23
HMGCL-206ENST00000496907 RBM26Q5T8P6 1007 aaKnown RBP7.39□□□□□ -1.23
HMGCL-206ENST00000496907 ZSCAN25Q6NSZ9 544 aa7.39□□□□□ -1.23
HMGCL-206ENST00000496907 Q7L0L9 218 aa7.39□□□□□ -1.23
HMGCL-206ENST00000496907 ERICH6Q7L0X2 663 aa7.39□□□□□ -1.23
HMGCL-206ENST00000496907 SAMD7Q7Z3H4 446 aa7.39□□□□□ -1.23
HMGCL-206ENST00000496907 TXNRD3Q86VQ6 643 aa7.39□□□□□ -1.23
HMGCL-206ENST00000496907 CHD1LQ86WJ1 897 aa7.39□□□□□ -1.23
HMGCL-206ENST00000496907 HS6ST3Q8IZP7 471 aa7.39□□□□□ -1.23
HMGCL-206ENST00000496907 SPATA5Q8NB90 893 aa7.39□□□□□ -1.23
HMGCL-206ENST00000496907 MTMR14Q8NCE2 650 aa7.39□□□□□ -1.23
HMGCL-206ENST00000496907 FBXW7Q969H0 707 aa7.39□□□□□ -1.23
HMGCL-206ENST00000496907 CCDC8Q9H0W5 538 aaPredicted RBP7.39□□□□□ -1.23
HMGCL-206ENST00000496907 IL1RAPL2Q9NP60 686 aa7.39□□□□□ -1.23
HMGCL-206ENST00000496907 CENPFP49454 3210 aa7.39□□□□□ -1.23
HMGCL-206ENST00000496907 HTTP42858 3142 aa7.38□□□□□ -1.23
HMGCL-206ENST00000496907 AOX1Q06278 1338 aa7.38□□□□□ -1.23
HMGCL-206ENST00000496907 SNAP23O00161 211 aa7.38□□□□□ -1.23
HMGCL-206ENST00000496907 APBB1O00213 710 aa7.38□□□□□ -1.23
HMGCL-206ENST00000496907 STK25O00506 426 aa7.38□□□□□ -1.23
HMGCL-206ENST00000496907 TBC1D8O95759 1140 aa7.38□□□□□ -1.23
HMGCL-206ENST00000496907 IGHDP01880 384 aa7.38□□□□□ -1.23
HMGCL-206ENST00000496907 LDHBP07195 334 aaKnown RBP7.38□□□□□ -1.23
HMGCL-206ENST00000496907 PHKA1P46020 1223 aa7.38□□□□□ -1.23
HMGCL-206ENST00000496907 ZNF280AP59817 542 aaPredicted RBP7.38□□□□□ -1.23
HMGCL-206ENST00000496907 IRX6P78412 446 aaPredicted RBP7.38□□□□□ -1.23
HMGCL-206ENST00000496907 MAP3K12Q12852 859 aa7.38□□□□□ -1.23
HMGCL-206ENST00000496907 FBXO46Q6PJ61 603 aaPredicted RBP7.38□□□□□ -1.23
HMGCL-206ENST00000496907 HHIPL2Q6UWX4 724 aa7.38□□□□□ -1.23
HMGCL-206ENST00000496907 SULF1Q8IWU6 871 aa7.38□□□□□ -1.23
HMGCL-206ENST00000496907 ZNF296Q8WUU4 475 aaPredicted RBP7.38□□□□□ -1.23
HMGCL-206ENST00000496907 GMLQ99445 158 aa7.38□□□□□ -1.23
HMGCL-206ENST00000496907 DBNDD2Q9BQY9 259 aa7.38□□□□□ -1.23
HMGCL-206ENST00000496907 NOL10Q9BSC4 688 aaKnown RBP7.38□□□□□ -1.23
HMGCL-206ENST00000496907 DDX24Q9GZR7 859 aaKnown RBP eCLIP7.38□□□□□ -1.23
HMGCL-206ENST00000496907 LRP2BPQ9P2M1 347 aa7.38□□□□□ -1.23
HMGCL-206ENST00000496907 STAP2Q9UGK3 403 aa7.38□□□□□ -1.23
HMGCL-206ENST00000496907 DBNLQ9UJU6 430 aaKnown RBP7.38□□□□□ -1.23
HMGCL-206ENST00000496907 SERPINA10Q9UK55 444 aa7.38□□□□□ -1.23
HMGCL-206ENST00000496907 LRRC37AA6NMS7 1700 aa7.38□□□□□ -1.23
HMGCL-206ENST00000496907 LAMA3Q16787 3333 aa7.37□□□□□ -1.23
HMGCL-206ENST00000496907 WTIPA6NIX2 430 aaPredicted RBP7.37□□□□□ -1.23
HMGCL-206ENST00000496907 BAG3O95817 575 aa7.37□□□□□ -1.23
HMGCL-206ENST00000496907 EGFRP00533 1210 aa7.37□□□□□ -1.23
HMGCL-206ENST00000496907 MX1P20591 662 aa7.37□□□□□ -1.23
HMGCL-206ENST00000496907 ADORA1P30542 326 aa7.37□□□□□ -1.23
HMGCL-206ENST00000496907 CHAF1AQ13111 956 aaPredicted RBP7.37□□□□□ -1.23
HMGCL-206ENST00000496907 DLGAP5Q15398 846 aa7.37□□□□□ -1.23
HMGCL-206ENST00000496907 RASAL3Q86YV0 1011 aa7.37□□□□□ -1.23
HMGCL-206ENST00000496907 TEKT1Q969V4 418 aa7.37□□□□□ -1.23
HMGCL-206ENST00000496907 HAUS7Q99871 368 aa7.37□□□□□ -1.23
HMGCL-206ENST00000496907 OSBPL3Q9H4L5 887 aa7.37□□□□□ -1.23
HMGCL-206ENST00000496907 GGA3Q9NZ52 723 aa7.37□□□□□ -1.23
HMGCL-206ENST00000496907 HMG20BQ9P0W2 317 aa7.37□□□□□ -1.23
HMGCL-206ENST00000496907 TTF2Q9UNY4 1162 aaKnown RBP7.37□□□□□ -1.23
HMGCL-206ENST00000496907 HIP1O00291 1037 aa7.36□□□□□ -1.23
HMGCL-206ENST00000496907 EIF5BO60841 1220 aaKnown RBP7.36□□□□□ -1.23
HMGCL-206ENST00000496907 RGS20O76081 388 aa7.36□□□□□ -1.23
HMGCL-206ENST00000496907 ZFYP08048 801 aaPredicted RBP7.36□□□□□ -1.23
HMGCL-206ENST00000496907 KLRK1P26718 216 aa7.36□□□□□ -1.23
HMGCL-206ENST00000496907 TNNI2P48788 182 aa7.36□□□□□ -1.23
HMGCL-206ENST00000496907 TNFAIP1Q13829 316 aa7.36□□□□□ -1.23
HMGCL-206ENST00000496907 RASGRF1Q13972 1273 aa7.36□□□□□ -1.23
HMGCL-206ENST00000496907 FKBP1CQ5VVH2 108 aa7.36□□□□□ -1.23
HMGCL-206ENST00000496907 B4GALNT3Q6L9W6 998 aa7.36□□□□□ -1.23
HMGCL-206ENST00000496907 DZIP1Q86YF9 867 aaKnown RBP7.36□□□□□ -1.23
HMGCL-206ENST00000496907 DEFB123Q8N688 67 aa7.36□□□□□ -1.23
HMGCL-206ENST00000496907 HOOK2Q96ED9 719 aa7.36□□□□□ -1.23
HMGCL-206ENST00000496907 CDCA5Q96FF9 252 aa7.36□□□□□ -1.23
HMGCL-206ENST00000496907 MYOZ2Q9NPC6 264 aa7.36□□□□□ -1.23
HMGCL-206ENST00000496907 TMOD2Q9NZR1 351 aa7.36□□□□□ -1.23
HMGCL-206ENST00000496907 ABCF2Q9UG63 623 aa7.36□□□□□ -1.23
HMGCL-206ENST00000496907 STK24Q9Y6E0 443 aa7.36□□□□□ -1.23
HMGCL-206ENST00000496907 TAF1P21675 1872 aa7.35□□□□□ -1.23
HMGCL-206ENST00000496907 DUOX1Q9NRD9 1551 aa7.35□□□□□ -1.23
HMGCL-206ENST00000496907 MCAMP43121 646 aa7.35□□□□□ -1.23
HMGCL-206ENST00000496907 RBM5P52756 815 aaKnown RBP eCLIP7.35□□□□□ -1.23
HMGCL-206ENST00000496907 PDE1AP54750 535 aa7.35□□□□□ -1.23
HMGCL-206ENST00000496907 LSM11P83369 360 aaKnown RBP eCLIP7.35□□□□□ -1.23
HMGCL-206ENST00000496907 KIF4BQ2VIQ3 1234 aa7.35□□□□□ -1.23
HMGCL-206ENST00000496907 APOBEC3FQ8IUX4 373 aaKnown RBP7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms