RNA–Protein interactions for RNA: ENST00000496822.1

NEK4-206, Transcript of NIMA related kinase 4, humanhuman

TSL 3

Gene NEK4, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-206ENST00000496822 MLLT1Q03111 559 aaPredicted RBP18.56■□□□□ 0.56
NEK4-206ENST00000496822 TAF1CQ15572 869 aaPredicted RBP18.56■□□□□ 0.56
NEK4-206ENST00000496822 OTOP1Q7RTM1 612 aa18.56■□□□□ 0.56
NEK4-206ENST00000496822 TRIM17Q9Y577 477 aa18.56■□□□□ 0.56
NEK4-206ENST00000496822 HTTP42858 3142 aa18.56■□□□□ 0.56
NEK4-206ENST00000496822 BTBD19C9JJ37 291 aa18.55■□□□□ 0.56
NEK4-206ENST00000496822 CETPP11597 493 aa18.55■□□□□ 0.56
NEK4-206ENST00000496822 SNAPC2Q13487 334 aa18.55■□□□□ 0.56
NEK4-206ENST00000496822 TTC39AQ5SRH9 613 aa18.55■□□□□ 0.56
NEK4-206ENST00000496822 NOL9Q5SY16 702 aaKnown RBP18.55■□□□□ 0.56
NEK4-206ENST00000496822 ZSCAN29Q8IWY8 852 aaPredicted RBP18.55■□□□□ 0.56
NEK4-206ENST00000496822 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.55■□□□□ 0.56
NEK4-206ENST00000496822 RAI14Q9P0K7 980 aa18.55■□□□□ 0.56
NEK4-206ENST00000496822 DBNLQ9UJU6 430 aaKnown RBP18.55■□□□□ 0.56
NEK4-206ENST00000496822 PPATQ06203 517 aa18.54■□□□□ 0.56
NEK4-206ENST00000496822 ERO1AQ96HE7 468 aa18.54■□□□□ 0.56
NEK4-206ENST00000496822 MAST2Q6P0Q8 1798 aa18.54■□□□□ 0.56
NEK4-206ENST00000496822 AK9Q5TCS8 1911 aa18.54■□□□□ 0.56
NEK4-206ENST00000496822 PHF20L1A8MW92 1017 aa18.53■□□□□ 0.56
NEK4-206ENST00000496822 GSTO1P78417 241 aa18.53■□□□□ 0.56
NEK4-206ENST00000496822 SP3Q02447 781 aa18.53■□□□□ 0.56
NEK4-206ENST00000496822 CCDC8Q9H0W5 538 aaPredicted RBP18.53■□□□□ 0.56
NEK4-206ENST00000496822 ZFYVE28Q9HCC9 887 aa18.53■□□□□ 0.56
NEK4-206ENST00000496822 LRP2BPQ9P2M1 347 aa18.53■□□□□ 0.56
NEK4-206ENST00000496822 EXOC6BQ9Y2D4 811 aa18.53■□□□□ 0.56
NEK4-206ENST00000496822 CYP2E1P05181 493 aaPredicted RBP18.52■□□□□ 0.56
NEK4-206ENST00000496822 CCDC158Q5M9N0 1113 aa18.52■□□□□ 0.56
NEK4-206ENST00000496822 EAF2Q96CJ1 260 aaPredicted RBP18.52■□□□□ 0.56
NEK4-206ENST00000496822 KCNH4Q9UQ05 1017 aa18.52■□□□□ 0.56
NEK4-206ENST00000496822 LDHCP07864 332 aa18.51■□□□□ 0.55
NEK4-206ENST00000496822 ZAP70P43403 619 aa18.51■□□□□ 0.55
NEK4-206ENST00000496822 MAP3K10Q02779 954 aa18.51■□□□□ 0.55
NEK4-206ENST00000496822 MOGSQ13724 837 aa18.51■□□□□ 0.55
NEK4-206ENST00000496822 PIH1D3Q9NQM4 214 aaKnown RBP18.51■□□□□ 0.55
NEK4-206ENST00000496822 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.51■□□□□ 0.55
NEK4-206ENST00000496822 FAM196BA6NMK8 535 aa18.5■□□□□ 0.55
NEK4-206ENST00000496822 ADGRA1Q86SQ6 560 aa18.5■□□□□ 0.55
NEK4-206ENST00000496822 SCYL3Q8IZE3 742 aa18.5■□□□□ 0.55
NEK4-206ENST00000496822 SH3RF3Q8TEJ3 882 aaPredicted RBP18.5■□□□□ 0.55
NEK4-206ENST00000496822 ZNF512BQ96KM6 892 aaPredicted RBP18.5■□□□□ 0.55
NEK4-206ENST00000496822 EFCC1Q9HA90 598 aa18.5■□□□□ 0.55
NEK4-206ENST00000496822 ZCCHC17Q9NP64 241 aaKnown RBP18.5■□□□□ 0.55
NEK4-206ENST00000496822 COG6Q9Y2V7 657 aa18.5■□□□□ 0.55
NEK4-206ENST00000496822 ZSWIM8A7E2V4 1837 aa18.5■□□□□ 0.55
NEK4-206ENST00000496822 TLR2O60603 784 aa18.49■□□□□ 0.55
NEK4-206ENST00000496822 NPM3O75607 178 aaKnown RBP18.49■□□□□ 0.55
NEK4-206ENST00000496822 NAA16Q6N069 864 aaPredicted RBP18.49■□□□□ 0.55
NEK4-206ENST00000496822 ANKRD23Q86SG2 305 aa18.49■□□□□ 0.55
NEK4-206ENST00000496822 TEX11Q8IYF3 940 aa18.49■□□□□ 0.55
NEK4-206ENST00000496822 OSBPL5Q9H0X9 879 aaPredicted RBP18.49■□□□□ 0.55
NEK4-206ENST00000496822 RCAN3Q9UKA8 241 aa18.49■□□□□ 0.55
NEK4-206ENST00000496822 PTPN22Q9Y2R2 807 aa18.49■□□□□ 0.55
NEK4-206ENST00000496822 NDUFB9Q9Y6M9 179 aa18.49■□□□□ 0.55
NEK4-206ENST00000496822 COL2A1P02458 1487 aaPredicted RBP18.49■□□□□ 0.55
NEK4-206ENST00000496822 DOCK1Q14185 1865 aa18.48■□□□□ 0.55
NEK4-206ENST00000496822 PTPRAP18433 802 aa18.48■□□□□ 0.55
NEK4-206ENST00000496822 CCDC84Q86UT8 332 aaPredicted RBP18.48■□□□□ 0.55
NEK4-206ENST00000496822 ARHGAP39Q9C0H5 1083 aa18.48■□□□□ 0.55
NEK4-206ENST00000496822 AATFQ9NY61 560 aaKnown RBP eCLIP18.48■□□□□ 0.55
NEK4-206ENST00000496822 ZHX2Q9Y6X8 837 aa18.48■□□□□ 0.55
NEK4-206ENST00000496822 ADGRA2Q96PE1 1338 aa18.48■□□□□ 0.55
NEK4-206ENST00000496822 PDHXO00330 501 aa18.47■□□□□ 0.55
NEK4-206ENST00000496822 MAP4K4O95819 1239 aaPredicted RBP18.47■□□□□ 0.55
NEK4-206ENST00000496822 MS4A1P11836 297 aa18.47■□□□□ 0.55
NEK4-206ENST00000496822 AACSQ86V21 672 aa18.47■□□□□ 0.55
NEK4-206ENST00000496822 SIRT2Q8IXJ6 389 aa18.47■□□□□ 0.55
NEK4-206ENST00000496822 IL1RAPL2Q9NP60 686 aa18.47■□□□□ 0.55
NEK4-206ENST00000496822 PICK1Q9NRD5 415 aa18.47■□□□□ 0.55
NEK4-206ENST00000496822 ZBTB40Q9NUA8 1239 aa18.47■□□□□ 0.55
NEK4-206ENST00000496822 MYO5AQ9Y4I1 1855 aaKnown RBP18.47■□□□□ 0.55
NEK4-206ENST00000496822 TNRC18O15417 2968 aaPredicted RBP18.47■□□□□ 0.55
NEK4-206ENST00000496822 CXCL11O14625 94 aa18.46■□□□□ 0.55
NEK4-206ENST00000496822 C20orf194Q5TEA3 1177 aa18.46■□□□□ 0.55
NEK4-206ENST00000496822 GPAT2Q6NUI2 795 aa18.46■□□□□ 0.55
NEK4-206ENST00000496822 ERC1Q8IUD2 1116 aa18.46■□□□□ 0.55
NEK4-206ENST00000496822 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.46■□□□□ 0.55
NEK4-206ENST00000496822 CPA4Q9UI42 421 aa18.46■□□□□ 0.55
NEK4-206ENST00000496822 DDX19BQ9UMR2 479 aa18.46■□□□□ 0.55
NEK4-206ENST00000496822 AFG3L2Q9Y4W6 797 aa18.46■□□□□ 0.55
NEK4-206ENST00000496822 SIPA1L1O43166 1804 aa18.46■□□□□ 0.55
NEK4-206ENST00000496822 A0A0G2JLL6 359 aaPredicted RBP18.45■□□□□ 0.54
NEK4-206ENST00000496822 TBC1D12O60347 775 aa18.45■□□□□ 0.54
NEK4-206ENST00000496822 CTNND1O60716 968 aaKnown RBP18.45■□□□□ 0.54
NEK4-206ENST00000496822 ECM2O94769 699 aaPredicted RBP18.45■□□□□ 0.54
NEK4-206ENST00000496822 LACTBP83111 547 aaPredicted RBP18.45■□□□□ 0.54
NEK4-206ENST00000496822 RRP1BQ14684 758 aaKnown RBP18.45■□□□□ 0.54
NEK4-206ENST00000496822 C17orf99Q6UX52 265 aa18.45■□□□□ 0.54
NEK4-206ENST00000496822 PRRT2Q7Z6L0 340 aaPredicted RBP18.45■□□□□ 0.54
NEK4-206ENST00000496822 RHPN1Q8TCX5 695 aa18.45■□□□□ 0.54
NEK4-206ENST00000496822 NOL10Q9BSC4 688 aaKnown RBP18.45■□□□□ 0.54
NEK4-206ENST00000496822 ANTXR1Q9H6X2 564 aa18.45■□□□□ 0.54
NEK4-206ENST00000496822 PHIPQ8WWQ0 1821 aa18.44■□□□□ 0.54
NEK4-206ENST00000496822 APBB1O00213 710 aa18.44■□□□□ 0.54
NEK4-206ENST00000496822 CTGFP29279 349 aa18.44■□□□□ 0.54
NEK4-206ENST00000496822 PPP4CP60510 307 aa18.44■□□□□ 0.54
NEK4-206ENST00000496822 DYNLL1P63167 89 aaKnown RBP18.44■□□□□ 0.54
NEK4-206ENST00000496822 MAPKAPK5Q8IW41 473 aa18.44■□□□□ 0.54
NEK4-206ENST00000496822 PTCH2Q9Y6C5 1203 aa18.44■□□□□ 0.54
NEK4-206ENST00000496822 FLT1P17948 1338 aa18.44■□□□□ 0.54
NEK4-206ENST00000496822 TRIM75PA6NK02 468 aa18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms