RNA–Protein interactions for RNA: ENST00000496445.5

VTI1A-209, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 853 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-209ENST00000496445 FPGT-TNNI3KV9GXZ4 949 aa17.6■□□□□ 0.41
VTI1A-209ENST00000496445 SIPA1L1O43166 1804 aa17.59■□□□□ 0.41
VTI1A-209ENST00000496445 IRF6O14896 467 aa17.59■□□□□ 0.41
VTI1A-209ENST00000496445 CAP1Q01518 475 aa17.59■□□□□ 0.41
VTI1A-209ENST00000496445 PPIL2Q13356 520 aa17.59■□□□□ 0.41
VTI1A-209ENST00000496445 FBXO46Q6PJ61 603 aaPredicted RBP17.59■□□□□ 0.41
VTI1A-209ENST00000496445 DBNDD2Q9BQY9 259 aa17.59■□□□□ 0.41
VTI1A-209ENST00000496445 ATAD5Q96QE3 1844 aa17.58■□□□□ 0.41
VTI1A-209ENST00000496445 GPR75-ASB3A0A0A6YYF3 556 aa17.58■□□□□ 0.4
VTI1A-209ENST00000496445 ENTPD3O75355 529 aa17.58■□□□□ 0.4
VTI1A-209ENST00000496445 SURF6O75683 361 aaKnown RBP17.58■□□□□ 0.4
VTI1A-209ENST00000496445 RHBDL3P58872 404 aa17.58■□□□□ 0.4
VTI1A-209ENST00000496445 MLLT1Q03111 559 aaPredicted RBP17.58■□□□□ 0.4
VTI1A-209ENST00000496445 NOL9Q5SY16 702 aaKnown RBP17.58■□□□□ 0.4
VTI1A-209ENST00000496445 CEP85Q6P2H3 762 aa17.58■□□□□ 0.4
VTI1A-209ENST00000496445 SLF2Q8IX21 1173 aa17.58■□□□□ 0.4
VTI1A-209ENST00000496445 NOP58Q9Y2X3 529 aaKnown RBP17.58■□□□□ 0.4
VTI1A-209ENST00000496445 DDTLA6NHG4 134 aaPredicted RBP17.57■□□□□ 0.4
VTI1A-209ENST00000496445 UQCRFS1P1P0C7P4 283 aa17.57■□□□□ 0.4
VTI1A-209ENST00000496445 SLURP2P0DP57 97 aa17.57■□□□□ 0.4
VTI1A-209ENST00000496445 PPATQ06203 517 aa17.57■□□□□ 0.4
VTI1A-209ENST00000496445 OS9Q13438 667 aaPredicted RBP17.57■□□□□ 0.4
VTI1A-209ENST00000496445 TAF1CQ15572 869 aaPredicted RBP17.57■□□□□ 0.4
VTI1A-209ENST00000496445 OTOP1Q7RTM1 612 aa17.57■□□□□ 0.4
VTI1A-209ENST00000496445 CD99L2Q8TCZ2 262 aa17.57■□□□□ 0.4
VTI1A-209ENST00000496445 TLR7Q9NYK1 1049 aaKnown RBP17.57■□□□□ 0.4
VTI1A-209ENST00000496445 MKI67P46013 3256 aaKnown RBP17.57■□□□□ 0.4
VTI1A-209ENST00000496445 RBBP6Q7Z6E9 1792 aaKnown RBP17.56■□□□□ 0.4
VTI1A-209ENST00000496445 PHF20L1A8MW92 1017 aa17.56■□□□□ 0.4
VTI1A-209ENST00000496445 BTBD19C9JJ37 291 aa17.56■□□□□ 0.4
VTI1A-209ENST00000496445 CETPP11597 493 aa17.56■□□□□ 0.4
VTI1A-209ENST00000496445 SNAPC2Q13487 334 aa17.56■□□□□ 0.4
VTI1A-209ENST00000496445 PICALMQ13492 652 aa17.56■□□□□ 0.4
VTI1A-209ENST00000496445 DBNLQ9UJU6 430 aaKnown RBP17.56■□□□□ 0.4
VTI1A-209ENST00000496445 TRIM17Q9Y577 477 aa17.56■□□□□ 0.4
VTI1A-209ENST00000496445 COL2A1P02458 1487 aaPredicted RBP17.56■□□□□ 0.4
VTI1A-209ENST00000496445 SP3Q02447 781 aa17.55■□□□□ 0.4
VTI1A-209ENST00000496445 TTC39AQ5SRH9 613 aa17.55■□□□□ 0.4
VTI1A-209ENST00000496445 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.55■□□□□ 0.4
VTI1A-209ENST00000496445 ERO1AQ96HE7 468 aa17.55■□□□□ 0.4
VTI1A-209ENST00000496445 SNRKQ9NRH2 765 aa17.55■□□□□ 0.4
VTI1A-209ENST00000496445 RAI14Q9P0K7 980 aa17.55■□□□□ 0.4
VTI1A-209ENST00000496445 KCNH4Q9UQ05 1017 aa17.55■□□□□ 0.4
VTI1A-209ENST00000496445 GSTO1P78417 241 aa17.54■□□□□ 0.4
VTI1A-209ENST00000496445 MAP3K10Q02779 954 aa17.54■□□□□ 0.4
VTI1A-209ENST00000496445 MOGSQ13724 837 aa17.54■□□□□ 0.4
VTI1A-209ENST00000496445 ZFYVE28Q9HCC9 887 aa17.54■□□□□ 0.4
VTI1A-209ENST00000496445 ZCCHC17Q9NP64 241 aaKnown RBP17.54■□□□□ 0.4
VTI1A-209ENST00000496445 CYP2E1P05181 493 aaPredicted RBP17.53■□□□□ 0.4
VTI1A-209ENST00000496445 CCDC158Q5M9N0 1113 aa17.53■□□□□ 0.4
VTI1A-209ENST00000496445 ZSCAN29Q8IWY8 852 aaPredicted RBP17.53■□□□□ 0.4
VTI1A-209ENST00000496445 EAF2Q96CJ1 260 aaPredicted RBP17.53■□□□□ 0.4
VTI1A-209ENST00000496445 ZNF512BQ96KM6 892 aaPredicted RBP17.53■□□□□ 0.4
VTI1A-209ENST00000496445 CCDC8Q9H0W5 538 aaPredicted RBP17.53■□□□□ 0.4
VTI1A-209ENST00000496445 EXOC6BQ9Y2D4 811 aa17.53■□□□□ 0.4
VTI1A-209ENST00000496445 LDHCP07864 332 aa17.52■□□□□ 0.4
VTI1A-209ENST00000496445 ADGRA1Q86SQ6 560 aa17.52■□□□□ 0.4
VTI1A-209ENST00000496445 SCYL3Q8IZE3 742 aa17.52■□□□□ 0.4
VTI1A-209ENST00000496445 EFCC1Q9HA90 598 aa17.52■□□□□ 0.4
VTI1A-209ENST00000496445 LRP2BPQ9P2M1 347 aa17.52■□□□□ 0.4
VTI1A-209ENST00000496445 PTPN22Q9Y2R2 807 aa17.52■□□□□ 0.4
VTI1A-209ENST00000496445 LOC285556D6RIA3 1793 aa17.52■□□□□ 0.4
VTI1A-209ENST00000496445 ADGRA2Q96PE1 1338 aa17.51■□□□□ 0.39
VTI1A-209ENST00000496445 TLR2O60603 784 aa17.51■□□□□ 0.39
VTI1A-209ENST00000496445 MAP4K4O95819 1239 aaPredicted RBP17.51■□□□□ 0.39
VTI1A-209ENST00000496445 ZAP70P43403 619 aa17.51■□□□□ 0.39
VTI1A-209ENST00000496445 ANKRD23Q86SG2 305 aa17.51■□□□□ 0.39
VTI1A-209ENST00000496445 SH3RF3Q8TEJ3 882 aaPredicted RBP17.51■□□□□ 0.39
VTI1A-209ENST00000496445 OSBPL5Q9H0X9 879 aaPredicted RBP17.51■□□□□ 0.39
VTI1A-209ENST00000496445 PIH1D3Q9NQM4 214 aaKnown RBP17.51■□□□□ 0.39
VTI1A-209ENST00000496445 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.51■□□□□ 0.39
VTI1A-209ENST00000496445 PTPRAP18433 802 aa17.5■□□□□ 0.39
VTI1A-209ENST00000496445 NAA16Q6N069 864 aaPredicted RBP17.5■□□□□ 0.39
VTI1A-209ENST00000496445 TEX11Q8IYF3 940 aa17.5■□□□□ 0.39
VTI1A-209ENST00000496445 ARHGAP39Q9C0H5 1083 aa17.5■□□□□ 0.39
VTI1A-209ENST00000496445 COG6Q9Y2V7 657 aa17.5■□□□□ 0.39
VTI1A-209ENST00000496445 PDE4DIPQ5VU43 2346 aa17.5■□□□□ 0.39
VTI1A-209ENST00000496445 MGAMO43451 1857 aa17.5■□□□□ 0.39
VTI1A-209ENST00000496445 DDX60LQ5H9U9 1706 aaKnown RBP17.5■□□□□ 0.39
VTI1A-209ENST00000496445 FAM196BA6NMK8 535 aa17.49■□□□□ 0.39
VTI1A-209ENST00000496445 MS4A1P11836 297 aa17.49■□□□□ 0.39
VTI1A-209ENST00000496445 AATFQ9NY61 560 aaKnown RBP eCLIP17.49■□□□□ 0.39
VTI1A-209ENST00000496445 NDUFB9Q9Y6M9 179 aa17.49■□□□□ 0.39
VTI1A-209ENST00000496445 MYH1P12882 1939 aa17.49■□□□□ 0.39
VTI1A-209ENST00000496445 A0A0G2JLL6 359 aaPredicted RBP17.48■□□□□ 0.39
VTI1A-209ENST00000496445 PDHXO00330 501 aa17.48■□□□□ 0.39
VTI1A-209ENST00000496445 CXCL11O14625 94 aa17.48■□□□□ 0.39
VTI1A-209ENST00000496445 TBC1D12O60347 775 aa17.48■□□□□ 0.39
VTI1A-209ENST00000496445 CTNND1O60716 968 aaKnown RBP17.48■□□□□ 0.39
VTI1A-209ENST00000496445 GPAT2Q6NUI2 795 aa17.48■□□□□ 0.39
VTI1A-209ENST00000496445 C17orf99Q6UX52 265 aa17.48■□□□□ 0.39
VTI1A-209ENST00000496445 PRRT2Q7Z6L0 340 aaPredicted RBP17.48■□□□□ 0.39
VTI1A-209ENST00000496445 CCDC84Q86UT8 332 aaPredicted RBP17.48■□□□□ 0.39
VTI1A-209ENST00000496445 ERC1Q8IUD2 1116 aa17.48■□□□□ 0.39
VTI1A-209ENST00000496445 SIRT2Q8IXJ6 389 aa17.48■□□□□ 0.39
VTI1A-209ENST00000496445 PICK1Q9NRD5 415 aa17.48■□□□□ 0.39
VTI1A-209ENST00000496445 ZBTB40Q9NUA8 1239 aa17.48■□□□□ 0.39
VTI1A-209ENST00000496445 RCAN3Q9UKA8 241 aa17.48■□□□□ 0.39
VTI1A-209ENST00000496445 DDX19BQ9UMR2 479 aa17.48■□□□□ 0.39
VTI1A-209ENST00000496445 AFG3L2Q9Y4W6 797 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms