RNA–Protein interactions for RNA: ENST00000496172.5

ERGIC3-219, Transcript of ERGIC and golgi 3, humanhuman

TSL 2

Gene ERGIC3, Length 781 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-219ENST00000496172 HSP90AB4PQ58FF6 505 aa12.86□□□□□ -0.35
ERGIC3-219ENST00000496172 TTC39AQ5SRH9 613 aa12.86□□□□□ -0.35
ERGIC3-219ENST00000496172 DCAF15Q66K64 600 aa12.86□□□□□ -0.35
ERGIC3-219ENST00000496172 CDC42EP5Q6NZY7 148 aa12.86□□□□□ -0.35
ERGIC3-219ENST00000496172 ERC1Q8IUD2 1116 aa12.86□□□□□ -0.35
ERGIC3-219ENST00000496172 NKX2-3Q8TAU0 364 aa12.86□□□□□ -0.35
ERGIC3-219ENST00000496172 FAM151AQ8WW52 585 aa12.86□□□□□ -0.35
ERGIC3-219ENST00000496172 ZCCHC17Q9NP64 241 aaKnown RBP12.86□□□□□ -0.35
ERGIC3-219ENST00000496172 HMG20BQ9P0W2 317 aa12.86□□□□□ -0.35
ERGIC3-219ENST00000496172 COG6Q9Y2V7 657 aa12.86□□□□□ -0.35
ERGIC3-219ENST00000496172 CSADQ9Y600 493 aa12.86□□□□□ -0.35
ERGIC3-219ENST00000496172 UNC80Q8N2C7 3258 aa12.85□□□□□ -0.35
ERGIC3-219ENST00000496172 HMMRO75330 724 aa12.85□□□□□ -0.35
ERGIC3-219ENST00000496172 LDHCP07864 332 aa12.85□□□□□ -0.35
ERGIC3-219ENST00000496172 TCP10Q12799 353 aa12.85□□□□□ -0.35
ERGIC3-219ENST00000496172 TAF1CQ15572 869 aaPredicted RBP12.85□□□□□ -0.35
ERGIC3-219ENST00000496172 RPAP2Q8IXW5 612 aaPredicted RBP12.85□□□□□ -0.35
ERGIC3-219ENST00000496172 BRI3BPQ8WY22 251 aa12.85□□□□□ -0.35
ERGIC3-219ENST00000496172 OPTNQ96CV9 577 aa12.85□□□□□ -0.35
ERGIC3-219ENST00000496172 HTATIP2Q9BUP3 242 aa12.85□□□□□ -0.35
ERGIC3-219ENST00000496172 LRP2BPQ9P2M1 347 aa12.85□□□□□ -0.35
ERGIC3-219ENST00000496172 LACTBP83111 547 aaPredicted RBP12.84□□□□□ -0.35
ERGIC3-219ENST00000496172 MECOMQ03112 1051 aa12.84□□□□□ -0.35
ERGIC3-219ENST00000496172 GPR153Q6NV75 609 aa12.84□□□□□ -0.35
ERGIC3-219ENST00000496172 CDAN1Q8IWY9 1227 aa12.84□□□□□ -0.35
ERGIC3-219ENST00000496172 SH3TC2Q8TF17 1288 aa12.84□□□□□ -0.35
ERGIC3-219ENST00000496172 DPF3Q92784 378 aa12.84□□□□□ -0.35
ERGIC3-219ENST00000496172 FAM163AQ96GL9 167 aaPredicted RBP12.84□□□□□ -0.35
ERGIC3-219ENST00000496172 DBNDD2Q9BQY9 259 aa12.84□□□□□ -0.35
ERGIC3-219ENST00000496172 ZNF341Q9BYN7 854 aa12.84□□□□□ -0.35
ERGIC3-219ENST00000496172 ELP3Q9H9T3 547 aa12.84□□□□□ -0.35
ERGIC3-219ENST00000496172 RAI14Q9P0K7 980 aa12.84□□□□□ -0.35
ERGIC3-219ENST00000496172 GAKO14976 1311 aa12.84□□□□□ -0.35
ERGIC3-219ENST00000496172 RPAP1Q9BWH6 1393 aaPredicted RBP12.83□□□□□ -0.36
ERGIC3-219ENST00000496172 TLR2O60603 784 aa12.83□□□□□ -0.36
ERGIC3-219ENST00000496172 MCAMP43121 646 aa12.83□□□□□ -0.36
ERGIC3-219ENST00000496172 BTDP43251 543 aa12.83□□□□□ -0.36
ERGIC3-219ENST00000496172 GJA8P48165 433 aa12.83□□□□□ -0.36
ERGIC3-219ENST00000496172 GTF2A2P52657 109 aa12.83□□□□□ -0.36
ERGIC3-219ENST00000496172 VGLL4Q14135 290 aa12.83□□□□□ -0.36
ERGIC3-219ENST00000496172 PDE3AQ14432 1141 aa12.83□□□□□ -0.36
ERGIC3-219ENST00000496172 TBC1D9Q6ZT07 1266 aa12.83□□□□□ -0.36
ERGIC3-219ENST00000496172 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.83□□□□□ -0.364e-11■□□□□ 9
ERGIC3-219ENST00000496172 ZNF512BQ96KM6 892 aaPredicted RBP12.83□□□□□ -0.36
ERGIC3-219ENST00000496172 WRNIP1Q96S55 665 aa12.83□□□□□ -0.36
ERGIC3-219ENST00000496172 NOL10Q9BSC4 688 aaKnown RBP12.83□□□□□ -0.36
ERGIC3-219ENST00000496172 ZBTB40Q9NUA8 1239 aa12.83□□□□□ -0.36
ERGIC3-219ENST00000496172 EXOC6BQ9Y2D4 811 aa12.83□□□□□ -0.36
ERGIC3-219ENST00000496172 NR2E3Q9Y5X4 410 aa12.83□□□□□ -0.36
ERGIC3-219ENST00000496172 MROH7-TTC4A0A0A0MT08 1334 aa12.83□□□□□ -0.36
ERGIC3-219ENST00000496172 ENTPD3O75355 529 aa12.82□□□□□ -0.36
ERGIC3-219ENST00000496172 MAP4K4O95819 1239 aaPredicted RBP12.82□□□□□ -0.36
ERGIC3-219ENST00000496172 GJB1P08034 283 aa12.82□□□□□ -0.36
ERGIC3-219ENST00000496172 NFIAQ12857 509 aa12.82□□□□□ -0.36
ERGIC3-219ENST00000496172 KIF22Q14807 665 aa12.82□□□□□ -0.36
ERGIC3-219ENST00000496172 PI16Q6UXB8 463 aa12.82□□□□□ -0.36
ERGIC3-219ENST00000496172 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.82□□□□□ -0.36
ERGIC3-219ENST00000496172 MIGA2Q7L4E1 593 aa12.82□□□□□ -0.36
ERGIC3-219ENST00000496172 ZSCAN29Q8IWY8 852 aaPredicted RBP12.82□□□□□ -0.36
ERGIC3-219ENST00000496172 IDI2Q9BXS1 227 aa12.82□□□□□ -0.36
ERGIC3-219ENST00000496172 CCDC8Q9H0W5 538 aaPredicted RBP12.82□□□□□ -0.36
ERGIC3-219ENST00000496172 GPR75-ASB3A0A0A6YYF3 556 aa12.81□□□□□ -0.36
ERGIC3-219ENST00000496172 CCL15-CCL14A0A0B4J2E2 113 aa12.81□□□□□ -0.36
ERGIC3-219ENST00000496172 SOX1O00570 391 aaPredicted RBP12.81□□□□□ -0.36
ERGIC3-219ENST00000496172 IGSF3O75054 1194 aa12.81□□□□□ -0.36
ERGIC3-219ENST00000496172 WDHD1O75717 1129 aaPredicted RBP12.81□□□□□ -0.36
ERGIC3-219ENST00000496172 CAPN2P17655 700 aa12.81□□□□□ -0.36
ERGIC3-219ENST00000496172 RGS3P49796 1198 aa12.81□□□□□ -0.36
ERGIC3-219ENST00000496172 CCL15Q16663 113 aa12.81□□□□□ -0.36
ERGIC3-219ENST00000496172 AACSQ86V21 672 aa12.81□□□□□ -0.36
ERGIC3-219ENST00000496172 FAM43AQ8N2R8 423 aa12.81□□□□□ -0.36
ERGIC3-219ENST00000496172 NSUN4Q96CB9 384 aaKnown RBP12.81□□□□□ -0.36
ERGIC3-219ENST00000496172 EAF2Q96CJ1 260 aaPredicted RBP12.81□□□□□ -0.36
ERGIC3-219ENST00000496172 SNRKQ9NRH2 765 aa12.81□□□□□ -0.36
ERGIC3-219ENST00000496172 FAM198AQ9UFP1 575 aa12.81□□□□□ -0.36
ERGIC3-219ENST00000496172 DBNLQ9UJU6 430 aaKnown RBP12.81□□□□□ -0.36
ERGIC3-219ENST00000496172 MYH2Q9UKX2 1941 aa12.8□□□□□ -0.36
ERGIC3-219ENST00000496172 RAB11FIP3O75154 756 aa12.8□□□□□ -0.36
ERGIC3-219ENST00000496172 BAG3O95817 575 aa12.8□□□□□ -0.36
ERGIC3-219ENST00000496172 PICALMQ13492 652 aa12.8□□□□□ -0.36
ERGIC3-219ENST00000496172 MTFR1Q15390 333 aa12.8□□□□□ -0.36
ERGIC3-219ENST00000496172 NAA16Q6N069 864 aaPredicted RBP12.8□□□□□ -0.36
ERGIC3-219ENST00000496172 ERO1BQ86YB8 467 aa12.8□□□□□ -0.36
ERGIC3-219ENST00000496172 CLASRPQ8N2M8 674 aaKnown RBP12.8□□□□□ -0.36
ERGIC3-219ENST00000496172 ZKSCAN4Q969J2 545 aaPredicted RBP12.8□□□□□ -0.36
ERGIC3-219ENST00000496172 KIF1BPQ96EK5 621 aa12.8□□□□□ -0.36
ERGIC3-219ENST00000496172 ARHGAP39Q9C0H5 1083 aa12.8□□□□□ -0.36
ERGIC3-219ENST00000496172 ALPK3Q96L96 1907 aa12.8□□□□□ -0.36
ERGIC3-219ENST00000496172 SPDYE5A6NIY4 337 aa12.79□□□□□ -0.36
ERGIC3-219ENST00000496172 APBB1O00213 710 aa12.79□□□□□ -0.36
ERGIC3-219ENST00000496172 MYCP01106 439 aaPredicted RBP12.79□□□□□ -0.36
ERGIC3-219ENST00000496172 RHPN1Q8TCX5 695 aa12.79□□□□□ -0.36
ERGIC3-219ENST00000496172 LRCH3Q96II8 777 aa12.79□□□□□ -0.36
ERGIC3-219ENST00000496172 TLR7Q9NYK1 1049 aaKnown RBP12.79□□□□□ -0.36
ERGIC3-219ENST00000496172 SRRDQ9UH36 339 aa12.79□□□□□ -0.36
ERGIC3-219ENST00000496172 SNCAIPQ9Y6H5 919 aa12.79□□□□□ -0.36
ERGIC3-219ENST00000496172 NPM3O75607 178 aaKnown RBP12.78□□□□□ -0.36
ERGIC3-219ENST00000496172 CYP2E1P05181 493 aaPredicted RBP12.78□□□□□ -0.36
ERGIC3-219ENST00000496172 IFIT2P09913 472 aaKnown RBP12.78□□□□□ -0.36
ERGIC3-219ENST00000496172 CETPP11597 493 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms