RNA–Protein interactions for RNA: ENST00000496143.5

PPM1F-208, Transcript of protein phosphatase, Mg2+/Mn2+ dependent 1F, humanhuman

TSL 4

Gene PPM1F, Length 544 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPM1F-208ENST00000496143 MIGA2Q7L4E1 593 aa25.86■■□□□ 1.73
PPM1F-208ENST00000496143 TEX11Q8IYF3 940 aa25.86■■□□□ 1.73
PPM1F-208ENST00000496143 TNS4Q8IZW8 715 aa25.86■■□□□ 1.73
PPM1F-208ENST00000496143 CYP7A1P22680 504 aa25.85■■□□□ 1.73
PPM1F-208ENST00000496143 OPTNQ96CV9 577 aa25.85■■□□□ 1.73
PPM1F-208ENST00000496143 DDX4Q9NQI0 724 aaKnown RBP25.85■■□□□ 1.73
PPM1F-208ENST00000496143 AATFQ9NY61 560 aaKnown RBP eCLIP25.85■■□□□ 1.73
PPM1F-208ENST00000496143 OTOFQ9HC10 1997 aa25.84■■□□□ 1.73
PPM1F-208ENST00000496143 ALDH1A1P00352 501 aa25.84■■□□□ 1.73
PPM1F-208ENST00000496143 PPP4CP60510 307 aa25.84■■□□□ 1.73
PPM1F-208ENST00000496143 ZFPM1Q8IX07 1006 aa25.84■■□□□ 1.73
PPM1F-208ENST00000496143 DNAJC2Q99543 621 aaKnown RBP25.84■■□□□ 1.73
PPM1F-208ENST00000496143 PCDHB15Q9Y5E8 787 aa25.84■■□□□ 1.73
PPM1F-208ENST00000496143 NDUFB9Q9Y6M9 179 aa25.84■■□□□ 1.73
PPM1F-208ENST00000496143 ATP5JP18859 108 aa25.83■■□□□ 1.73
PPM1F-208ENST00000496143 GPATCH3Q96I76 525 aa25.83■■□□□ 1.73
PPM1F-208ENST00000496143 ANTXR1Q9H6X2 564 aa25.83■■□□□ 1.73
PPM1F-208ENST00000496143 AK9Q5TCS8 1911 aa25.82■■□□□ 1.72
PPM1F-208ENST00000496143 SPDYE5A6NIY4 337 aa25.82■■□□□ 1.72
PPM1F-208ENST00000496143 OTUD7BQ6GQQ9 843 aa25.82■■□□□ 1.72
PPM1F-208ENST00000496143 ERO1BQ86YB8 467 aa25.82■■□□□ 1.72
PPM1F-208ENST00000496143 MAGEB6Q8N7X4 407 aa25.82■■□□□ 1.72
PPM1F-208ENST00000496143 SH3RF3Q8TEJ3 882 aaPredicted RBP25.82■■□□□ 1.72
PPM1F-208ENST00000496143 ZKSCAN4Q969J2 545 aaPredicted RBP25.82■■□□□ 1.72
PPM1F-208ENST00000496143 ZNF112Q9UJU3 913 aa25.82■■□□□ 1.72
PPM1F-208ENST00000496143 SNCAIPQ9Y6H5 919 aa25.82■■□□□ 1.72
PPM1F-208ENST00000496143 COL2A1P02458 1487 aaPredicted RBP25.82■■□□□ 1.72
PPM1F-208ENST00000496143 ATRNL1Q5VV63 1379 aa25.82■■□□□ 1.72
PPM1F-208ENST00000496143 SMARCA5O60264 1052 aaPredicted RBP25.81■■□□□ 1.72
PPM1F-208ENST00000496143 GTF2A2P52657 109 aa25.81■■□□□ 1.72
PPM1F-208ENST00000496143 OTUD5Q96G74 571 aa25.81■■□□□ 1.72
PPM1F-208ENST00000496143 OSBPL5Q9H0X9 879 aaPredicted RBP25.81■■□□□ 1.72
PPM1F-208ENST00000496143 DDTLA6NHG4 134 aaPredicted RBP25.8■■□□□ 1.72
PPM1F-208ENST00000496143 GOLIM4O00461 696 aa25.8■■□□□ 1.72
PPM1F-208ENST00000496143 GJA5P36382 358 aa25.8■■□□□ 1.72
PPM1F-208ENST00000496143 SH3BP5LQ7L8J4 393 aa25.8■■□□□ 1.72
PPM1F-208ENST00000496143 ADGRA1Q86SQ6 560 aa25.8■■□□□ 1.72
PPM1F-208ENST00000496143 DOCK2Q92608 1830 aa25.79■■□□□ 1.72
PPM1F-208ENST00000496143 INPP5BP32019 993 aa25.79■■□□□ 1.72
PPM1F-208ENST00000496143 IFNL1Q8IU54 200 aa25.79■■□□□ 1.72
PPM1F-208ENST00000496143 DHX36Q9H2U1 1008 aaKnown RBP25.79■■□□□ 1.72
PPM1F-208ENST00000496143 BOLA2Q9H3K6 86 aa25.79■■□□□ 1.72
PPM1F-208ENST00000496143 PAG1Q9NWQ8 432 aa25.79■■□□□ 1.72
PPM1F-208ENST00000496143 ZBTB47Q9UFB7 747 aaPredicted RBP25.79■■□□□ 1.72
PPM1F-208ENST00000496143 NOL9Q5SY16 702 aaKnown RBP25.78■■□□□ 1.72
PPM1F-208ENST00000496143 HAUS7Q99871 368 aa25.78■■□□□ 1.72
PPM1F-208ENST00000496143 ECHDC1Q9NTX5 307 aa25.78■■□□□ 1.72
PPM1F-208ENST00000496143 TESPA1A2RU30 521 aaPredicted RBP25.77■■□□□ 1.72
PPM1F-208ENST00000496143 TBC1D12O60347 775 aa25.77■■□□□ 1.72
PPM1F-208ENST00000496143 MAP3K10Q02779 954 aa25.77■■□□□ 1.72
PPM1F-208ENST00000496143 PPATQ06203 517 aa25.77■■□□□ 1.72
PPM1F-208ENST00000496143 PPIL2Q13356 520 aa25.77■■□□□ 1.72
PPM1F-208ENST00000496143 SLC9C2Q5TAH2 1124 aa25.77■■□□□ 1.72
PPM1F-208ENST00000496143 TGFBRAP1Q8WUH2 860 aa25.77■■□□□ 1.72
PPM1F-208ENST00000496143 CNKSR2Q8WXI2 1034 aa25.77■■□□□ 1.72
PPM1F-208ENST00000496143 CFHR5Q9BXR6 569 aa25.77■■□□□ 1.72
PPM1F-208ENST00000496143 DDX24Q9GZR7 859 aaKnown RBP eCLIP25.77■■□□□ 1.722e-6■■■■□ 20.1
PPM1F-208ENST00000496143 MIGA1Q8NAN2 632 aa25.76■■□□□ 1.71
PPM1F-208ENST00000496143 PICK1Q9NRD5 415 aa25.76■■□□□ 1.71
PPM1F-208ENST00000496143 LAMB1P07942 1786 aa25.76■■□□□ 1.71
PPM1F-208ENST00000496143 MYO5AQ9Y4I1 1855 aaKnown RBP25.75■■□□□ 1.71
PPM1F-208ENST00000496143 FLT1P17948 1338 aa25.75■■□□□ 1.71
PPM1F-208ENST00000496143 CETPP11597 493 aa25.75■■□□□ 1.71
PPM1F-208ENST00000496143 PDE6AP16499 860 aa25.75■■□□□ 1.71
PPM1F-208ENST00000496143 SNAPC2Q13487 334 aa25.75■■□□□ 1.71
PPM1F-208ENST00000496143 IFFO2Q5TF58 517 aa25.75■■□□□ 1.71
PPM1F-208ENST00000496143 MAPKAPK5Q8IW41 473 aa25.75■■□□□ 1.71
PPM1F-208ENST00000496143 MS4A4AQ96JQ5 239 aa25.75■■□□□ 1.71
PPM1F-208ENST00000496143 XPO5Q9HAV4 1204 aaKnown RBP eCLIP25.75■■□□□ 1.71
PPM1F-208ENST00000496143 PI4KBQ9UBF8 816 aa25.75■■□□□ 1.71
PPM1F-208ENST00000496143 HERC5Q9UII4 1024 aaKnown RBP25.75■■□□□ 1.71
PPM1F-208ENST00000496143 CCL15-CCL14A0A0B4J2E2 113 aa25.74■■□□□ 1.71
PPM1F-208ENST00000496143 PHF20L1A8MW92 1017 aa25.74■■□□□ 1.71
PPM1F-208ENST00000496143 CTNND1O60716 968 aaKnown RBP25.74■■□□□ 1.71
PPM1F-208ENST00000496143 TBC1D8O95759 1140 aa25.74■■□□□ 1.71
PPM1F-208ENST00000496143 USP5P45974 858 aa25.74■■□□□ 1.71
PPM1F-208ENST00000496143 DYNLL1P63167 89 aaKnown RBP25.74■■□□□ 1.71
PPM1F-208ENST00000496143 HDAC1Q13547 482 aaPredicted RBP25.74■■□□□ 1.71
PPM1F-208ENST00000496143 CCL15Q16663 113 aa25.74■■□□□ 1.71
PPM1F-208ENST00000496143 NOM1Q5C9Z4 860 aaKnown RBP25.74■■□□□ 1.71
PPM1F-208ENST00000496143 SCYL3Q8IZE3 742 aa25.74■■□□□ 1.71
PPM1F-208ENST00000496143 GCC1Q96CN9 775 aa25.74■■□□□ 1.71
PPM1F-208ENST00000496143 MAGEB6P1A0A0J9YX57 407 aa25.73■■□□□ 1.71
PPM1F-208ENST00000496143 IGF2BP3O00425 579 aaKnown RBP eCLIP25.73■■□□□ 1.71
PPM1F-208ENST00000496143 HLA-DOAP06340 250 aa25.73■■□□□ 1.71
PPM1F-208ENST00000496143 TRIM34Q9BYJ4 488 aa25.73■■□□□ 1.71
PPM1F-208ENST00000496143 ZNF532Q9HCE3 1301 aa25.72■■□□□ 1.71
PPM1F-208ENST00000496143 IRF6O14896 467 aa25.72■■□□□ 1.71
PPM1F-208ENST00000496143 ZSCAN25Q6NSZ9 544 aa25.72■■□□□ 1.71
PPM1F-208ENST00000496143 EDC3Q96F86 508 aaKnown RBP25.72■■□□□ 1.71
PPM1F-208ENST00000496143 SUPT16HQ9Y5B9 1047 aaKnown RBP25.72■■□□□ 1.71
PPM1F-208ENST00000496143 BRI3BPQ8WY22 251 aa25.71■■□□□ 1.71
PPM1F-208ENST00000496143 TTC41PQ6P2S7 1318 aa25.7■■□□□ 1.71
PPM1F-208ENST00000496143 GPR25O00155 361 aa25.7■■□□□ 1.7
PPM1F-208ENST00000496143 ERC2O15083 957 aa25.7■■□□□ 1.7
PPM1F-208ENST00000496143 FOXP4Q8IVH2 680 aaPredicted RBP25.7■■□□□ 1.7
PPM1F-208ENST00000496143 CRACR2BQ8N4Y2 399 aaPredicted RBP25.7■■□□□ 1.7
PPM1F-208ENST00000496143 PTPN18Q99952 460 aa25.7■■□□□ 1.7
PPM1F-208ENST00000496143 CRNKL1Q9BZJ0 848 aaKnown RBP25.7■■□□□ 1.7
PPM1F-208ENST00000496143 RIOK1Q9BRS2 568 aaKnown RBP25.69■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms