RNA–Protein interactions for RNA: ENST00000496043.5

PTPRF-214, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 5

Gene PTPRF, Length 415 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-214ENST00000496043 NOL9Q5SY16 702 aaKnown RBP15.64■□□□□ 0.09
PTPRF-214ENST00000496043 ZNF512BQ96KM6 892 aaPredicted RBP15.64■□□□□ 0.09
PTPRF-214ENST00000496043 DBNDD2Q9BQY9 259 aa15.64■□□□□ 0.09
PTPRF-214ENST00000496043 ZCCHC17Q9NP64 241 aaKnown RBP15.64■□□□□ 0.09
PTPRF-214ENST00000496043 SNRKQ9NRH2 765 aa15.64■□□□□ 0.09
PTPRF-214ENST00000496043 BTBD19C9JJ37 291 aa15.63■□□□□ 0.09
PTPRF-214ENST00000496043 NPM3O75607 178 aaKnown RBP15.63■□□□□ 0.09
PTPRF-214ENST00000496043 RHBDL3P58872 404 aa15.63■□□□□ 0.09
PTPRF-214ENST00000496043 MAP3K10Q02779 954 aa15.63■□□□□ 0.09
PTPRF-214ENST00000496043 CEP85Q6P2H3 762 aa15.63■□□□□ 0.09
PTPRF-214ENST00000496043 SH3BP5LQ7L8J4 393 aa15.63■□□□□ 0.09
PTPRF-214ENST00000496043 OTOP1Q7RTM1 612 aa15.63■□□□□ 0.09
PTPRF-214ENST00000496043 CD99L2Q8TCZ2 262 aa15.63■□□□□ 0.09
PTPRF-214ENST00000496043 ZNF384Q8TF68 577 aa15.63■□□□□ 0.09
PTPRF-214ENST00000496043 NOL10Q9BSC4 688 aaKnown RBP15.63■□□□□ 0.09
PTPRF-214ENST00000496043 EFCC1Q9HA90 598 aa15.63■□□□□ 0.09
PTPRF-214ENST00000496043 DDX4Q9NQI0 724 aaKnown RBP15.63■□□□□ 0.09
PTPRF-214ENST00000496043 DDTLA6NHG4 134 aaPredicted RBP15.62■□□□□ 0.09
PTPRF-214ENST00000496043 PHF20L1A8MW92 1017 aa15.62■□□□□ 0.09
PTPRF-214ENST00000496043 IGSF3O75054 1194 aa15.62■□□□□ 0.09
PTPRF-214ENST00000496043 SOX10P56693 466 aa15.62■□□□□ 0.09
PTPRF-214ENST00000496043 HSP90AB4PQ58FF6 505 aa15.62■□□□□ 0.09
PTPRF-214ENST00000496043 ERC1Q8IUD2 1116 aa15.62■□□□□ 0.09
PTPRF-214ENST00000496043 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.62■□□□□ 0.09
PTPRF-214ENST00000496043 CCDC8Q9H0W5 538 aaPredicted RBP15.62■□□□□ 0.09
PTPRF-214ENST00000496043 PICK1Q9NRD5 415 aa15.62■□□□□ 0.09
PTPRF-214ENST00000496043 KCNH4Q9UQ05 1017 aa15.62■□□□□ 0.09
PTPRF-214ENST00000496043 CXCL11O14625 94 aa15.61■□□□□ 0.09
PTPRF-214ENST00000496043 TBC1D12O60347 775 aa15.61■□□□□ 0.09
PTPRF-214ENST00000496043 TLR2O60603 784 aa15.61■□□□□ 0.09
PTPRF-214ENST00000496043 BAG3O95817 575 aa15.61■□□□□ 0.09
PTPRF-214ENST00000496043 NAA16Q6N069 864 aaPredicted RBP15.61■□□□□ 0.09
PTPRF-214ENST00000496043 EAF2Q96CJ1 260 aaPredicted RBP15.61■□□□□ 0.09
PTPRF-214ENST00000496043 CHMP4BQ9H444 224 aaKnown RBP15.61■□□□□ 0.09
PTPRF-214ENST00000496043 PTPN22Q9Y2R2 807 aa15.61■□□□□ 0.09
PTPRF-214ENST00000496043 CTNND1O60716 968 aaKnown RBP15.6■□□□□ 0.09
PTPRF-214ENST00000496043 CYP2E1P05181 493 aaPredicted RBP15.6■□□□□ 0.09
PTPRF-214ENST00000496043 ZAP70P43403 619 aa15.6■□□□□ 0.09
PTPRF-214ENST00000496043 ANKRD23Q86SG2 305 aa15.6■□□□□ 0.09
PTPRF-214ENST00000496043 RPAP2Q8IXW5 612 aaPredicted RBP15.6■□□□□ 0.09
PTPRF-214ENST00000496043 TEX11Q8IYF3 940 aa15.6■□□□□ 0.09
PTPRF-214ENST00000496043 SCYL3Q8IZE3 742 aa15.6■□□□□ 0.09
PTPRF-214ENST00000496043 DBNLQ9UJU6 430 aaKnown RBP15.6■□□□□ 0.09
PTPRF-214ENST00000496043 RCAN3Q9UKA8 241 aa15.6■□□□□ 0.09
PTPRF-214ENST00000496043 DDX19BQ9UMR2 479 aa15.6■□□□□ 0.09
PTPRF-214ENST00000496043 ZHX2Q9Y6X8 837 aa15.6■□□□□ 0.09
PTPRF-214ENST00000496043 MYH2Q9UKX2 1941 aa15.6■□□□□ 0.09
PTPRF-214ENST00000496043 AK9Q5TCS8 1911 aa15.59■□□□□ 0.09
PTPRF-214ENST00000496043 OTOFQ9HC10 1997 aa15.59■□□□□ 0.09
PTPRF-214ENST00000496043 PLCG2P16885 1265 aa15.59■□□□□ 0.09
PTPRF-214ENST00000496043 PTPRAP18433 802 aa15.59■□□□□ 0.09
PTPRF-214ENST00000496043 PPP4CP60510 307 aa15.59■□□□□ 0.09
PTPRF-214ENST00000496043 KIF22Q14807 665 aa15.59■□□□□ 0.09
PTPRF-214ENST00000496043 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.59■□□□□ 0.09
PTPRF-214ENST00000496043 EXOC6BQ9Y2D4 811 aa15.59■□□□□ 0.09
PTPRF-214ENST00000496043 COG6Q9Y2V7 657 aa15.59■□□□□ 0.09
PTPRF-214ENST00000496043 PDHXO00330 501 aa15.58■□□□□ 0.08
PTPRF-214ENST00000496043 HMMRO75330 724 aa15.58■□□□□ 0.08
PTPRF-214ENST00000496043 FASTKD5Q7L8L6 764 aaKnown RBP15.58■□□□□ 0.08
PTPRF-214ENST00000496043 SH3RF3Q8TEJ3 882 aaPredicted RBP15.58■□□□□ 0.08
PTPRF-214ENST00000496043 OSBPL5Q9H0X9 879 aaPredicted RBP15.58■□□□□ 0.08
PTPRF-214ENST00000496043 RFX7Q2KHR2 1363 aa15.58■□□□□ 0.08
PTPRF-214ENST00000496043 ATRNL1Q5VV63 1379 aa15.58■□□□□ 0.08
PTPRF-214ENST00000496043 SLURP2P0DP57 97 aa15.57■□□□□ 0.08
PTPRF-214ENST00000496043 AACSQ86V21 672 aa15.57■□□□□ 0.08
PTPRF-214ENST00000496043 RHPN1Q8TCX5 695 aa15.57■□□□□ 0.08
PTPRF-214ENST00000496043 DHX36Q9H2U1 1008 aaKnown RBP15.57■□□□□ 0.08
PTPRF-214ENST00000496043 PIH1D3Q9NQM4 214 aaKnown RBP15.57■□□□□ 0.08
PTPRF-214ENST00000496043 ZBTB40Q9NUA8 1239 aa15.57■□□□□ 0.08
PTPRF-214ENST00000496043 AATFQ9NY61 560 aaKnown RBP eCLIP15.57■□□□□ 0.08
PTPRF-214ENST00000496043 TLR7Q9NYK1 1049 aaKnown RBP15.57■□□□□ 0.08
PTPRF-214ENST00000496043 AFG3L2Q9Y4W6 797 aa15.57■□□□□ 0.08
PTPRF-214ENST00000496043 MOGSQ13724 837 aa15.56■□□□□ 0.08
PTPRF-214ENST00000496043 C17orf99Q6UX52 265 aa15.56■□□□□ 0.08
PTPRF-214ENST00000496043 PI4KBQ9UBF8 816 aa15.56■□□□□ 0.08
PTPRF-214ENST00000496043 LAMB1P07942 1786 aa15.56■□□□□ 0.08
PTPRF-214ENST00000496043 GNRH1P01148 92 aa15.55■□□□□ 0.08
PTPRF-214ENST00000496043 CYP7A1P22680 504 aa15.55■□□□□ 0.08
PTPRF-214ENST00000496043 LACTBP83111 547 aaPredicted RBP15.55■□□□□ 0.08
PTPRF-214ENST00000496043 CAP1Q01518 475 aa15.55■□□□□ 0.08
PTPRF-214ENST00000496043 GPAT2Q6NUI2 795 aa15.55■□□□□ 0.08
PTPRF-214ENST00000496043 NBPF11Q86T75 865 aa15.55■□□□□ 0.08
PTPRF-214ENST00000496043 FOXP4Q8IVH2 680 aaPredicted RBP15.55■□□□□ 0.08
PTPRF-214ENST00000496043 CLASRPQ8N2M8 674 aaKnown RBP15.55■□□□□ 0.08
PTPRF-214ENST00000496043 TGFBRAP1Q8WUH2 860 aa15.55■□□□□ 0.08
PTPRF-214ENST00000496043 KIF1BPQ96EK5 621 aa15.55■□□□□ 0.08
PTPRF-214ENST00000496043 IL1RAPL2Q9NP60 686 aa15.55■□□□□ 0.08
PTPRF-214ENST00000496043 CPA4Q9UI42 421 aa15.55■□□□□ 0.08
PTPRF-214ENST00000496043 HERC5Q9UII4 1024 aaKnown RBP15.55■□□□□ 0.08
PTPRF-214ENST00000496043 A0A0G2JLL6 359 aaPredicted RBP15.54■□□□□ 0.08
PTPRF-214ENST00000496043 RAB11FIP3O75154 756 aa15.54■□□□□ 0.08
PTPRF-214ENST00000496043 IDH1O75874 414 aaKnown RBP15.54■□□□□ 0.08
PTPRF-214ENST00000496043 MAP3K12Q12852 859 aa15.54■□□□□ 0.08
PTPRF-214ENST00000496043 TMED8Q6PL24 325 aaPredicted RBP15.54■□□□□ 0.08
PTPRF-214ENST00000496043 GADL1Q6ZQY3 521 aa15.54■□□□□ 0.08
PTPRF-214ENST00000496043 PRRT2Q7Z6L0 340 aaPredicted RBP15.54■□□□□ 0.08
PTPRF-214ENST00000496043 FAM196BA6NMK8 535 aa15.53■□□□□ 0.08
PTPRF-214ENST00000496043 APBB1O00213 710 aa15.53■□□□□ 0.08
PTPRF-214ENST00000496043 HOXD10P28358 340 aa15.53■□□□□ 0.08
PTPRF-214ENST00000496043 CAP2P40123 477 aa15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms