RNA–Protein interactions for RNA: ENST00000496024.1

CALD1-223, Transcript of caldesmon 1, human

TSL 4

Gene CALD1, Length 557 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CALD1-223	ENST00000496024	DDX24	Q9GZR7	859 aa	Known RBP eCLIP	11.9	□□□□□ -0.5
CALD1-223	ENST00000496024	CDK5RAP2	Q96SN8	1893 aa		11.89	□□□□□ -0.51
CALD1-223	ENST00000496024	MAGEB6P1	A0A0J9YX57	407 aa		11.89	□□□□□ -0.51
CALD1-223	ENST00000496024	DDTL	A6NHG4	134 aa	Predicted RBP	11.89	□□□□□ -0.51
CALD1-223	ENST00000496024	GLRX3	O76003	335 aa	Known RBP	11.89	□□□□□ -0.51
CALD1-223	ENST00000496024	SLURP2	P0DP57	97 aa		11.89	□□□□□ -0.51
CALD1-223	ENST00000496024	NUCB1	Q02818	461 aa		11.89	□□□□□ -0.51
CALD1-223	ENST00000496024	SLC4A8	Q2Y0W8	1093 aa		11.89	□□□□□ -0.51
CALD1-223	ENST00000496024	LDLRAD1	Q5T700	205 aa		11.89	□□□□□ -0.51
CALD1-223	ENST00000496024	DCAF15	Q66K64	600 aa		11.89	□□□□□ -0.51
CALD1-223	ENST00000496024	SH3BP5L	Q7L8J4	393 aa		11.89	□□□□□ -0.51
CALD1-223	ENST00000496024	RASAL3	Q86YV0	1011 aa		11.89	□□□□□ -0.51
CALD1-223	ENST00000496024	JMY	Q8N9B5	988 aa		11.89	□□□□□ -0.51
CALD1-223	ENST00000496024	CCDC102A	Q96A19	550 aa		11.89	□□□□□ -0.51
CALD1-223	ENST00000496024	HOOK2	Q96ED9	719 aa		11.89	□□□□□ -0.51
CALD1-223	ENST00000496024	SLC10A4	Q96EP9	437 aa		11.89	□□□□□ -0.51
CALD1-223	ENST00000496024	CSRNP1	Q96S65	589 aa		11.89	□□□□□ -0.51
CALD1-223	ENST00000496024	ZIC5	Q96T25	663 aa		11.89	□□□□□ -0.51
CALD1-223	ENST00000496024	SAP30BP	Q9UHR5	308 aa	Known RBP	11.89	□□□□□ -0.51
CALD1-223	ENST00000496024	RFX7	Q2KHR2	1363 aa		11.89	□□□□□ -0.51
CALD1-223	ENST00000496024	SALL3	Q9BXA9	1300 aa		11.88	□□□□□ -0.51
CALD1-223	ENST00000496024	TCRBV5S4A2T	A0A5A2	114 aa		11.88	□□□□□ -0.51
CALD1-223	ENST00000496024	FAM155A	B1AL88	458 aa	Predicted RBP	11.88	□□□□□ -0.51
CALD1-223	ENST00000496024	IGSF3	O75054	1194 aa		11.88	□□□□□ -0.51
CALD1-223	ENST00000496024	NEFL	P07196	543 aa		11.88	□□□□□ -0.51
CALD1-223	ENST00000496024	SLC10A3	P09131	477 aa		11.88	□□□□□ -0.51
CALD1-223	ENST00000496024	ADD2	P35612	726 aa		11.88	□□□□□ -0.51
CALD1-223	ENST00000496024	USP5	P45974	858 aa		11.88	□□□□□ -0.51
CALD1-223	ENST00000496024	PDE1A	P54750	535 aa		11.88	□□□□□ -0.51
CALD1-223	ENST00000496024	KBTBD3	Q8NAB2	608 aa		11.88	□□□□□ -0.51
CALD1-223	ENST00000496024	WRNIP1	Q96S55	665 aa		11.88	□□□□□ -0.51
CALD1-223	ENST00000496024	OSBPL5	Q9H0X9	879 aa	Predicted RBP	11.88	□□□□□ -0.51
CALD1-223	ENST00000496024	ELP3	Q9H9T3	547 aa		11.88	□□□□□ -0.51
CALD1-223	ENST00000496024	OTOF	Q9HC10	1997 aa		11.88	□□□□□ -0.51
CALD1-223	ENST00000496024	RPAP1	Q9BWH6	1393 aa	Predicted RBP	11.88	□□□□□ -0.51
CALD1-223	ENST00000496024	FAM196B	A6NMK8	535 aa		11.87	□□□□□ -0.51
CALD1-223	ENST00000496024	MAP3K9	P80192	1104 aa		11.87	□□□□□ -0.51
CALD1-223	ENST00000496024	KIF23	Q02241	960 aa	Predicted RBP	11.87	□□□□□ -0.51
CALD1-223	ENST00000496024	NOG	Q13253	232 aa		11.87	□□□□□ -0.51
CALD1-223	ENST00000496024	MAP3K11	Q16584	847 aa		11.87	□□□□□ -0.51
CALD1-223	ENST00000496024	ZSCAN25	Q6NSZ9	544 aa		11.87	□□□□□ -0.51
CALD1-223	ENST00000496024	ANKRD13A	Q8IZ07	590 aa		11.87	□□□□□ -0.51
CALD1-223	ENST00000496024	LCORL	Q8N3X6	602 aa		11.87	□□□□□ -0.51
CALD1-223	ENST00000496024	ZKSCAN4	Q969J2	545 aa	Predicted RBP	11.87	□□□□□ -0.51
CALD1-223	ENST00000496024	FSD1	Q9BTV5	496 aa		11.87	□□□□□ -0.51
CALD1-223	ENST00000496024	ZNF341	Q9BYN7	854 aa		11.87	□□□□□ -0.51
CALD1-223	ENST00000496024	ARMT1	Q9H993	441 aa		11.87	□□□□□ -0.51
CALD1-223	ENST00000496024	STAP2	Q9UGK3	403 aa		11.87	□□□□□ -0.51
CALD1-223	ENST00000496024	PALD1	Q9ULE6	856 aa		11.87	□□□□□ -0.51
CALD1-223	ENST00000496024	CSAD	Q9Y600	493 aa		11.87	□□□□□ -0.51
CALD1-223	ENST00000496024	MYH1	P12882	1939 aa		11.87	□□□□□ -0.51
CALD1-223	ENST00000496024	FLT1	P17948	1338 aa		11.86	□□□□□ -0.51
CALD1-223	ENST00000496024	MBD4	O95243	580 aa		11.86	□□□□□ -0.51
CALD1-223	ENST00000496024	HSPA1A	P0DMV8	641 aa	Known RBP	11.86	□□□□□ -0.51
CALD1-223	ENST00000496024	HSPA1B	P0DMV9	641 aa	Known RBP	11.86	□□□□□ -0.51
CALD1-223	ENST00000496024	INPP5B	P32019	993 aa		11.86	□□□□□ -0.51
CALD1-223	ENST00000496024	MAP2K2	P36507	400 aa		11.86	□□□□□ -0.51
CALD1-223	ENST00000496024	VGLL4	Q14135	290 aa		11.86	□□□□□ -0.51
CALD1-223	ENST00000496024	TMED8	Q6PL24	325 aa	Predicted RBP	11.86	□□□□□ -0.51
CALD1-223	ENST00000496024	PPP1R3F	Q6ZSY5	799 aa	Predicted RBP	11.86	□□□□□ -0.51
CALD1-223	ENST00000496024	PLEKHM2	Q8IWE5	1019 aa		11.86	□□□□□ -0.51
CALD1-223	ENST00000496024	CNKSR2	Q8WXI2	1034 aa		11.86	□□□□□ -0.51
CALD1-223	ENST00000496024	RIOK1	Q9BRS2	568 aa	Known RBP	11.86	□□□□□ -0.51
CALD1-223	ENST00000496024	FOCAD	Q5VW36	1801 aa		11.86	□□□□□ -0.51
CALD1-223	ENST00000496024	TRIM6-TRIM34	B2RNG4	842 aa		11.85	□□□□□ -0.51
CALD1-223	ENST00000496024	RNF113A	O15541	343 aa	Known RBP	11.85	□□□□□ -0.51
CALD1-223	ENST00000496024	PRKAB2	O43741	272 aa		11.85	□□□□□ -0.51
CALD1-223	ENST00000496024	NPM3	O75607	178 aa	Known RBP	11.85	□□□□□ -0.51
CALD1-223	ENST00000496024	MAP2K1	Q02750	393 aa	Predicted RBP	11.85	□□□□□ -0.51
CALD1-223	ENST00000496024	UBE3C	Q15386	1083 aa		11.85	□□□□□ -0.51
CALD1-223	ENST00000496024	SPRYD7	Q5W111	196 aa		11.85	□□□□□ -0.51
CALD1-223	ENST00000496024	CERS3	Q8IU89	383 aa		11.85	□□□□□ -0.51
CALD1-223	ENST00000496024	DDX55	Q8NHQ9	600 aa	Known RBP eCLIP	11.85	□□□□□ -0.51
CALD1-223	ENST00000496024	SDR42E1	Q8WUS8	393 aa		11.85	□□□□□ -0.51
CALD1-223	ENST00000496024	AIDA	Q96BJ3	306 aa		11.85	□□□□□ -0.51
CALD1-223	ENST00000496024	WNK4	Q96J92	1243 aa		11.85	□□□□□ -0.51
CALD1-223	ENST00000496024	CRNKL1	Q9BZJ0	848 aa	Known RBP	11.85	□□□□□ -0.51
CALD1-223	ENST00000496024	PUS7L	Q9H0K6	701 aa	Known RBP	11.85	□□□□□ -0.51
CALD1-223	ENST00000496024	XPO5	Q9HAV4	1204 aa	Known RBP eCLIP	11.85	□□□□□ -0.51
CALD1-223	ENST00000496024	ATRNL1	Q5VV63	1379 aa		11.84	□□□□□ -0.51
CALD1-223	ENST00000496024	PDE4A	P27815	886 aa		11.84	□□□□□ -0.51
CALD1-223	ENST00000496024	GJA5	P36382	358 aa		11.84	□□□□□ -0.51
CALD1-223	ENST00000496024	OSBP2	Q969R2	916 aa		11.84	□□□□□ -0.51
CALD1-223	ENST00000496024	RILPL2	Q969X0	211 aa		11.84	□□□□□ -0.51
CALD1-223	ENST00000496024	OPTN	Q96CV9	577 aa		11.84	□□□□□ -0.51
CALD1-223	ENST00000496024	OTUD5	Q96G74	571 aa		11.84	□□□□□ -0.51
CALD1-223	ENST00000496024	BEGAIN	Q9BUH8	593 aa		11.84	□□□□□ -0.51
CALD1-223	ENST00000496024	TRIM34	Q9BYJ4	488 aa		11.84	□□□□□ -0.51
CALD1-223	ENST00000496024	WBP1L	Q9NX94	342 aa		11.84	□□□□□ -0.51
CALD1-223	ENST00000496024	SNCAIP	Q9Y6H5	919 aa		11.84	□□□□□ -0.51
CALD1-223	ENST00000496024	BAZ2A	Q9UIF9	1905 aa	Known RBP	11.84	□□□□□ -0.51
CALD1-223	ENST00000496024	UNCX	A6NJT0	531 aa		11.83	□□□□□ -0.52
CALD1-223	ENST00000496024	POLR3D	P05423	398 aa	Predicted RBP	11.83	□□□□□ -0.52
CALD1-223	ENST00000496024	HLA-DOA	P06340	250 aa		11.83	□□□□□ -0.52
CALD1-223	ENST00000496024	ZFY	P08048	801 aa	Predicted RBP	11.83	□□□□□ -0.52
CALD1-223	ENST00000496024	LRRFIP1	Q32MZ4	808 aa	Known RBP	11.83	□□□□□ -0.52
CALD1-223	ENST00000496024	CRACR2B	Q8N4Y2	399 aa	Predicted RBP	11.83	□□□□□ -0.52
CALD1-223	ENST00000496024	APPBP2	Q92624	585 aa		11.83	□□□□□ -0.52
CALD1-223	ENST00000496024	SEC62	Q99442	399 aa	Known RBP	11.83	□□□□□ -0.52
CALD1-223	ENST00000496024	MCM9	Q9NXL9	1143 aa		11.83	□□□□□ -0.52

Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms