RNA–Protein interactions for RNA: ENST00000495952.5

SURF1-204, Transcript of SURF1, cytochrome c oxidase assembly factor, humanhuman

TSL 2

Gene SURF1, Length 931 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SURF1-204ENST00000495952 ZNF579Q8NAF0 562 aaKnown RBP11.36□□□□□ -0.59
SURF1-204ENST00000495952 TSC1Q92574 1164 aa11.36□□□□□ -0.59
SURF1-204ENST00000495952 LY9Q9HBG7 655 aa11.36□□□□□ -0.59
SURF1-204ENST00000495952 GPHNQ9NQX3 736 aaPredicted RBP11.36□□□□□ -0.59
SURF1-204ENST00000495952 IFNKQ9P0W0 207 aa11.36□□□□□ -0.59
SURF1-204ENST00000495952 BCL9LQ86UU0 1499 aa11.36□□□□□ -0.59
SURF1-204ENST00000495952 CACNA1SQ13698 1873 aa11.36□□□□□ -0.59
SURF1-204ENST00000495952 ZNF532Q9HCE3 1301 aa11.35□□□□□ -0.59
SURF1-204ENST00000495952 PATL2C9JE40 543 aaKnown RBP11.35□□□□□ -0.59
SURF1-204ENST00000495952 POLR3DP05423 398 aaPredicted RBP11.35□□□□□ -0.59
SURF1-204ENST00000495952 SLC5A1P13866 664 aa11.35□□□□□ -0.59
SURF1-204ENST00000495952 SART3Q15020 963 aaKnown RBP11.35□□□□□ -0.59
SURF1-204ENST00000495952 RILPL1Q5EBL4 403 aa11.35□□□□□ -0.59
SURF1-204ENST00000495952 E4F1Q66K89 784 aaPredicted RBP11.35□□□□□ -0.59
SURF1-204ENST00000495952 CCDC102BQ68D86 513 aa11.35□□□□□ -0.59
SURF1-204ENST00000495952 KANK3Q6NY19 840 aa11.35□□□□□ -0.59
SURF1-204ENST00000495952 ARMCX5Q6P1M9 558 aa11.35□□□□□ -0.59
SURF1-204ENST00000495952 OLFM4Q6UX06 510 aa11.35□□□□□ -0.59
SURF1-204ENST00000495952 CYB5R4Q7L1T6 521 aa11.35□□□□□ -0.59
SURF1-204ENST00000495952 TMTC2Q8N394 836 aa11.35□□□□□ -0.59
SURF1-204ENST00000495952 IGDCC4Q8TDY8 1250 aa11.35□□□□□ -0.59
SURF1-204ENST00000495952 STAG1Q8WVM7 1258 aa11.35□□□□□ -0.59
SURF1-204ENST00000495952 PPP1R13BQ96KQ4 1090 aa11.35□□□□□ -0.59
SURF1-204ENST00000495952 STRBPQ96SI9 672 aaKnown RBP11.35□□□□□ -0.59
SURF1-204ENST00000495952 FOXP1Q9H334 677 aaPredicted RBP11.35□□□□□ -0.59
SURF1-204ENST00000495952 TMX1Q9H3N1 280 aa11.35□□□□□ -0.59
SURF1-204ENST00000495952 CNNM1Q9NRU3 951 aa11.35□□□□□ -0.59
SURF1-204ENST00000495952 CEP131Q9UPN4 1083 aa11.35□□□□□ -0.59
SURF1-204ENST00000495952 AHDC1Q5TGY3 1603 aaPredicted RBP11.35□□□□□ -0.59
SURF1-204ENST00000495952 UBN2Q6ZU65 1347 aa11.35□□□□□ -0.59
SURF1-204ENST00000495952 CCDC196A0A1B0GTZ2 297 aa11.34□□□□□ -0.59
SURF1-204ENST00000495952 USP27XA6NNY8 438 aa11.34□□□□□ -0.59
SURF1-204ENST00000495952 IRS4O14654 1257 aaPredicted RBP11.34□□□□□ -0.59
SURF1-204ENST00000495952 WDHD1O75717 1129 aaPredicted RBP11.34□□□□□ -0.59
SURF1-204ENST00000495952 IL6STP40189 918 aaPredicted RBP11.34□□□□□ -0.59
SURF1-204ENST00000495952 SSRP1Q08945 709 aaKnown RBP11.34□□□□□ -0.59
SURF1-204ENST00000495952 MAP3K12Q12852 859 aa11.34□□□□□ -0.59
SURF1-204ENST00000495952 GNL2Q13823 731 aaKnown RBP11.34□□□□□ -0.59
SURF1-204ENST00000495952 SAFBQ15424 915 aaKnown RBP eCLIP11.34□□□□□ -0.59
SURF1-204ENST00000495952 CCDC93Q567U6 631 aa11.34□□□□□ -0.59
SURF1-204ENST00000495952 TMEM67Q5HYA8 995 aa11.34□□□□□ -0.59
SURF1-204ENST00000495952 NT5DC1Q5TFE4 455 aa11.34□□□□□ -0.59
SURF1-204ENST00000495952 OTUD7BQ6GQQ9 843 aa11.34□□□□□ -0.59
SURF1-204ENST00000495952 SHC4Q6S5L8 630 aa11.34□□□□□ -0.59
SURF1-204ENST00000495952 KRBA2Q6ZNG9 492 aa11.34□□□□□ -0.59
SURF1-204ENST00000495952 VSTM4Q8IW00 320 aa11.34□□□□□ -0.59
SURF1-204ENST00000495952 TRIM22Q8IYM9 498 aa11.34□□□□□ -0.59
SURF1-204ENST00000495952 KRI1Q8N9T8 703 aaKnown RBP11.34□□□□□ -0.59
SURF1-204ENST00000495952 AIDAQ96BJ3 306 aa11.34□□□□□ -0.59
SURF1-204ENST00000495952 FAM89AQ96GI7 184 aa11.34□□□□□ -0.59
SURF1-204ENST00000495952 CCDC34Q96HJ3 373 aa11.34□□□□□ -0.59
SURF1-204ENST00000495952 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.34□□□□□ -0.59
SURF1-204ENST00000495952 RNF41Q9H4P4 317 aaPredicted RBP11.34□□□□□ -0.59
SURF1-204ENST00000495952 GREM2Q9H772 168 aa11.34□□□□□ -0.59
SURF1-204ENST00000495952 PIH1D3Q9NQM4 214 aaKnown RBP11.34□□□□□ -0.59
SURF1-204ENST00000495952 FAM53CQ9NYF3 392 aa11.34□□□□□ -0.59
SURF1-204ENST00000495952 COL24A1Q17RW2 1714 aa11.34□□□□□ -0.59
SURF1-204ENST00000495952 MYH1P12882 1939 aa11.33□□□□□ -0.6
SURF1-204ENST00000495952 DEXIO95424 95 aa11.33□□□□□ -0.6
SURF1-204ENST00000495952 BMP15O95972 392 aa11.33□□□□□ -0.6
SURF1-204ENST00000495952 MMP1P03956 469 aa11.33□□□□□ -0.6
SURF1-204ENST00000495952 PCP11498 1178 aaKnown RBP11.33□□□□□ -0.6
SURF1-204ENST00000495952 CYP19A1P11511 503 aaPredicted RBP11.33□□□□□ -0.6
SURF1-204ENST00000495952 ARID5BQ14865 1188 aa11.33□□□□□ -0.6
SURF1-204ENST00000495952 AKNAD1Q5T1N1 836 aa11.33□□□□□ -0.6
SURF1-204ENST00000495952 NOSTRINQ8IVI9 506 aa11.33□□□□□ -0.6
SURF1-204ENST00000495952 ZNF34Q8IZ26 560 aa11.33□□□□□ -0.6
SURF1-204ENST00000495952 MLKLQ8NB16 471 aa11.33□□□□□ -0.6
SURF1-204ENST00000495952 NACAP1Q9BZK3 213 aa11.33□□□□□ -0.6
SURF1-204ENST00000495952 NAPBQ9H115 298 aa11.33□□□□□ -0.6
SURF1-204ENST00000495952 HSD3B7Q9H2F3 369 aa11.33□□□□□ -0.6
SURF1-204ENST00000495952 FAM217BQ9NTX9 383 aaPredicted RBP11.33□□□□□ -0.6
SURF1-204ENST00000495952 SLC12A7Q9Y666 1083 aa11.33□□□□□ -0.6
SURF1-204ENST00000495952 B4E1Z4 1266 aa11.32□□□□□ -0.6
SURF1-204ENST00000495952 ARHGAP6O43182 974 aa11.32□□□□□ -0.6
SURF1-204ENST00000495952 ZSCAN12O43309 604 aa11.32□□□□□ -0.6
SURF1-204ENST00000495952 RANBP6O60518 1105 aaKnown RBP11.32□□□□□ -0.6
SURF1-204ENST00000495952 IDH1O75874 414 aaKnown RBP11.32□□□□□ -0.6
SURF1-204ENST00000495952 TPM1P09493 284 aa11.32□□□□□ -0.6
SURF1-204ENST00000495952 PTPREP23469 700 aa11.32□□□□□ -0.6
SURF1-204ENST00000495952 CDC27P30260 824 aa11.32□□□□□ -0.6
SURF1-204ENST00000495952 NT5C2P49902 561 aa11.32□□□□□ -0.6
SURF1-204ENST00000495952 UBASH3AP57075 661 aa11.32□□□□□ -0.6
SURF1-204ENST00000495952 ETF1P62495 437 aaKnown RBP11.32□□□□□ -0.6
SURF1-204ENST00000495952 PI16Q6UXB8 463 aa11.32□□□□□ -0.6
SURF1-204ENST00000495952 NFXL1Q6ZNB6 911 aa11.32□□□□□ -0.6
SURF1-204ENST00000495952 METTL16Q86W50 562 aaKnown RBP11.32□□□□□ -0.6
SURF1-204ENST00000495952 IFNL3Q8IZI9 196 aa11.32□□□□□ -0.6
SURF1-204ENST00000495952 KRT222Q8N1A0 295 aa11.32□□□□□ -0.6
SURF1-204ENST00000495952 SPATA5Q8NB90 893 aa11.32□□□□□ -0.6
SURF1-204ENST00000495952 CNNM3Q8NE01 707 aa11.32□□□□□ -0.6
SURF1-204ENST00000495952 ENOX1Q8TC92 643 aaKnown RBP11.32□□□□□ -0.6
SURF1-204ENST00000495952 PIGBQ92521 554 aa11.32□□□□□ -0.6
SURF1-204ENST00000495952 EPB41L4AQ9HCS5 686 aaPredicted RBP11.32□□□□□ -0.6
SURF1-204ENST00000495952 ZNF215Q9UL58 517 aaPredicted RBP11.32□□□□□ -0.6
SURF1-204ENST00000495952 KCNH3Q9ULD8 1083 aa11.32□□□□□ -0.6
SURF1-204ENST00000495952 ZBTB22O15209 634 aa11.31□□□□□ -0.6
SURF1-204ENST00000495952 H2AFXP16104 143 aaPredicted RBP11.31□□□□□ -0.6
SURF1-204ENST00000495952 PHKA1P46020 1223 aa11.31□□□□□ -0.6
SURF1-204ENST00000495952 SARSP49591 514 aaKnown RBP11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms