RNA–Protein interactions for RNA: ENST00000495940.2

TFE3-205, Transcript of transcription factor binding to IGHM enhancer 3, humanhuman

TSL 2

Gene TFE3, Length 758 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFE3-205ENST00000495940 RPAP1Q9BWH6 1393 aaPredicted RBP16.69■□□□□ 0.26
TFE3-205ENST00000495940 MYH13Q9UKX3 1938 aa16.69■□□□□ 0.26
TFE3-205ENST00000495940 DOCK2Q92608 1830 aa16.69■□□□□ 0.26
TFE3-205ENST00000495940 MAGEA10P43363 369 aaPredicted RBP16.69■□□□□ 0.26
TFE3-205ENST00000495940 FLT3LGP49771 235 aa16.69■□□□□ 0.26
TFE3-205ENST00000495940 IFIT5Q13325 482 aaKnown RBP16.69■□□□□ 0.26
TFE3-205ENST00000495940 LRIT3Q3SXY7 679 aa16.69■□□□□ 0.26
TFE3-205ENST00000495940 MIGA2Q7L4E1 593 aa16.69■□□□□ 0.26
TFE3-205ENST00000495940 PARK7Q99497 189 aaKnown RBP16.69■□□□□ 0.26
TFE3-205ENST00000495940 PAK6Q9NQU5 681 aaPredicted RBP16.69■□□□□ 0.26
TFE3-205ENST00000495940 IQSEC3Q9UPP2 1182 aaPredicted RBP16.69■□□□□ 0.26
TFE3-205ENST00000495940 KCNH4Q9UQ05 1017 aa16.69■□□□□ 0.26
TFE3-205ENST00000495940 FOXO4P98177 505 aa16.68■□□□□ 0.26
TFE3-205ENST00000495940 ZNF341Q9BYN7 854 aa16.68■□□□□ 0.26
TFE3-205ENST00000495940 CRISPLD2Q9H0B8 497 aa16.68■□□□□ 0.26
TFE3-205ENST00000495940 PRUNE2Q8WUY3 3088 aa16.67■□□□□ 0.26
TFE3-205ENST00000495940 EXOSC9Q06265 439 aaKnown RBP16.67■□□□□ 0.26
TFE3-205ENST00000495940 CHAF1AQ13111 956 aaPredicted RBP16.67■□□□□ 0.26
TFE3-205ENST00000495940 GPAT2Q6NUI2 795 aa16.67■□□□□ 0.26
TFE3-205ENST00000495940 TDHQ8IZJ6 230 aa16.67■□□□□ 0.26
TFE3-205ENST00000495940 STK31Q9BXU1 1019 aa16.67■□□□□ 0.26
TFE3-205ENST00000495940 TAOK2Q9UL54 1235 aa16.67■□□□□ 0.26
TFE3-205ENST00000495940 PCDHB15Q9Y5E8 787 aa16.67■□□□□ 0.26
TFE3-205ENST00000495940 PHIPQ8WWQ0 1821 aa16.66■□□□□ 0.26
TFE3-205ENST00000495940 HIBADHP31937 336 aaKnown RBP16.66■□□□□ 0.26
TFE3-205ENST00000495940 EPHA10Q5JZY3 1008 aa16.66■□□□□ 0.26
TFE3-205ENST00000495940 DCAF15Q66K64 600 aa16.66■□□□□ 0.26
TFE3-205ENST00000495940 NECAB2Q7Z6G3 386 aa16.66■□□□□ 0.26
TFE3-205ENST00000495940 FAM83AQ86UY5 434 aa16.66■□□□□ 0.26
TFE3-205ENST00000495940 TSR2Q969E8 191 aaKnown RBP16.66■□□□□ 0.26
TFE3-205ENST00000495940 FAM84BQ96KN1 310 aaPredicted RBP16.66■□□□□ 0.26
TFE3-205ENST00000495940 CNNM1Q9NRU3 951 aa16.66■□□□□ 0.26
TFE3-205ENST00000495940 TMOD2Q9NZR1 351 aa16.66■□□□□ 0.26
TFE3-205ENST00000495940 RLBP1P12271 317 aa16.65■□□□□ 0.26
TFE3-205ENST00000495940 LDHAL6AQ6ZMR3 332 aa16.65■□□□□ 0.26
TFE3-205ENST00000495940 SMC5Q8IY18 1101 aa16.65■□□□□ 0.26
TFE3-205ENST00000495940 TEKT1Q969V4 418 aa16.65■□□□□ 0.26
TFE3-205ENST00000495940 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.65■□□□□ 0.26
TFE3-205ENST00000495940 RPTORQ8N122 1335 aa16.65■□□□□ 0.26
TFE3-205ENST00000495940 DOCK1Q14185 1865 aa16.65■□□□□ 0.26
TFE3-205ENST00000495940 TNPO2O14787 897 aaKnown RBP16.64■□□□□ 0.25
TFE3-205ENST00000495940 FLIIQ13045 1269 aa16.64■□□□□ 0.25
TFE3-205ENST00000495940 TAF7LQ5H9L4 462 aa16.64■□□□□ 0.25
TFE3-205ENST00000495940 LMBR1LQ6UX01 489 aa16.64■□□□□ 0.25
TFE3-205ENST00000495940 PXYLP1Q8TE99 480 aa16.64■□□□□ 0.25
TFE3-205ENST00000495940 DNAAF4Q8WXU2 420 aa16.64■□□□□ 0.25
TFE3-205ENST00000495940 SSH1Q8WYL5 1049 aa16.64■□□□□ 0.25
TFE3-205ENST00000495940 GUCD1Q96NT3 240 aa16.64■□□□□ 0.25
TFE3-205ENST00000495940 TRIM27P14373 513 aa16.63■□□□□ 0.25
TFE3-205ENST00000495940 NFKBIBQ15653 356 aa16.63■□□□□ 0.25
TFE3-205ENST00000495940 APOBEC3HQ6NTF7 200 aaKnown RBP16.63■□□□□ 0.25
TFE3-205ENST00000495940 LINS1Q8NG48 757 aa16.63■□□□□ 0.25
TFE3-205ENST00000495940 HOOK2Q96ED9 719 aa16.63■□□□□ 0.25
TFE3-205ENST00000495940 ZDHHC15Q96MV8 337 aa16.63■□□□□ 0.25
TFE3-205ENST00000495940 TBC1D32Q96NH3 1257 aa16.63■□□□□ 0.25
TFE3-205ENST00000495940 UBE2OQ9C0C9 1292 aaKnown RBP16.63■□□□□ 0.25
TFE3-205ENST00000495940 PLXNB2O15031 1838 aa16.63■□□□□ 0.25
TFE3-205ENST00000495940 CACNA1FO60840 1977 aa16.62■□□□□ 0.25
TFE3-205ENST00000495940 COL2A1P02458 1487 aaPredicted RBP16.62■□□□□ 0.25
TFE3-205ENST00000495940 SLC4A2P04920 1241 aa16.62■□□□□ 0.25
TFE3-205ENST00000495940 HDLBPQ00341 1268 aaKnown RBP16.62■□□□□ 0.25
TFE3-205ENST00000495940 FKBP5Q13451 457 aaPredicted RBP16.62■□□□□ 0.25
TFE3-205ENST00000495940 IRF5Q13568 498 aa16.62■□□□□ 0.25
TFE3-205ENST00000495940 UBE4AQ14139 1066 aa16.62■□□□□ 0.25
TFE3-205ENST00000495940 FAM161BQ96MY7 647 aa16.62■□□□□ 0.25
TFE3-205ENST00000495940 ZNF112Q9UJU3 913 aa16.62■□□□□ 0.25
TFE3-205ENST00000495940 TCP10Q12799 353 aa16.61■□□□□ 0.25
TFE3-205ENST00000495940 CCDC57Q2TAC2 916 aa16.61■□□□□ 0.25
TFE3-205ENST00000495940 NOL9Q5SY16 702 aaKnown RBP16.61■□□□□ 0.25
TFE3-205ENST00000495940 FKBP1CQ5VVH2 108 aa16.61■□□□□ 0.25
TFE3-205ENST00000495940 PUS3Q9BZE2 481 aaKnown RBP16.61■□□□□ 0.25
TFE3-205ENST00000495940 ZBTB40Q9NUA8 1239 aa16.61■□□□□ 0.25
TFE3-205ENST00000495940 MAST2Q6P0Q8 1798 aa16.61■□□□□ 0.25
TFE3-205ENST00000495940 TRIM32Q13049 653 aa16.6■□□□□ 0.25
TFE3-205ENST00000495940 GSE1Q14687 1217 aa16.6■□□□□ 0.25
TFE3-205ENST00000495940 GADL1Q6ZQY3 521 aa16.6■□□□□ 0.25
TFE3-205ENST00000495940 CHMP4AQ9BY43 222 aa16.6■□□□□ 0.25
TFE3-205ENST00000495940 FRMPD3Q5JV73 1810 aa16.6■□□□□ 0.25
TFE3-205ENST00000495940 A0A0G2JLL6 359 aaPredicted RBP16.59■□□□□ 0.25
TFE3-205ENST00000495940 TWISTNBQ3B726 338 aaPredicted RBP16.59■□□□□ 0.25
TFE3-205ENST00000495940 PRRT2Q7Z6L0 340 aaPredicted RBP16.59■□□□□ 0.25
TFE3-205ENST00000495940 ITPRIPQ8IWB1 547 aa16.59■□□□□ 0.25
TFE3-205ENST00000495940 ANKLE1Q8NAG6 615 aa16.59■□□□□ 0.25
TFE3-205ENST00000495940 API5Q9BZZ5 524 aaKnown RBP16.59■□□□□ 0.25
TFE3-205ENST00000495940 NBPF3Q9H094 633 aa16.59■□□□□ 0.25
TFE3-205ENST00000495940 C11orf49Q9H6J7 331 aa16.59■□□□□ 0.25
TFE3-205ENST00000495940 PRDM6Q9NQX0 595 aa16.59■□□□□ 0.25
TFE3-205ENST00000495940 NOB1Q9ULX3 412 aaKnown RBP16.59■□□□□ 0.25
TFE3-205ENST00000495940 DNAH12Q6ZR08 3092 aa16.59■□□□□ 0.25
TFE3-205ENST00000495940 PFASO15067 1338 aa16.59■□□□□ 0.25
TFE3-205ENST00000495940 CDH23Q9H251 3354 aa16.59■□□□□ 0.25
TFE3-205ENST00000495940 LOC285556D6RIA3 1793 aa16.59■□□□□ 0.25
TFE3-205ENST00000495940 F6X3S4 739 aa16.58■□□□□ 0.24
TFE3-205ENST00000495940 FRAT2O75474 233 aaPredicted RBP16.58■□□□□ 0.24
TFE3-205ENST00000495940 CAPN2P17655 700 aa16.58■□□□□ 0.24
TFE3-205ENST00000495940 NFIAQ12857 509 aa16.58■□□□□ 0.24
TFE3-205ENST00000495940 FBXO33Q7Z6M2 555 aa16.58■□□□□ 0.24
TFE3-205ENST00000495940 SKAP1Q86WV1 359 aa16.58■□□□□ 0.24
TFE3-205ENST00000495940 VPS37DQ86XT2 251 aa16.58■□□□□ 0.24
TFE3-205ENST00000495940 SMCR8Q8TEV9 937 aaPredicted RBP16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms