RNA–Protein interactions for RNA: ENST00000495910.6

NF1-216, Transcript of neurofibromin 1, humanhuman

TSL 2

Gene NF1, Length 8,223 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-216ENST00000495910 HOMER3Q9NSC5 361 aa5.74□□□□□ -1.49
NF1-216ENST00000495910 SRGAP3O43295 1099 aa5.74□□□□□ -1.49
NF1-216ENST00000495910 PDE6AP16499 860 aa5.74□□□□□ -1.49
NF1-216ENST00000495910 CASP2P42575 452 aa5.74□□□□□ -1.49
NF1-216ENST00000495910 HDAC4P56524 1084 aa5.74□□□□□ -1.49
NF1-216ENST00000495910 GNGT1P63211 74 aa5.74□□□□□ -1.49
NF1-216ENST00000495910 ANKRD42Q8N9B4 389 aa5.74□□□□□ -1.49
NF1-216ENST00000495910 DACH2Q96NX9 599 aa5.74□□□□□ -1.49
NF1-216ENST00000495910 SUCLA2Q9P2R7 463 aaPredicted RBP5.74□□□□□ -1.49
NF1-216ENST00000495910 MINDY4BA8MYZ0 360 aa5.74□□□□□ -1.49
NF1-216ENST00000495910 LIG3P49916 1009 aa5.74□□□□□ -1.49
NF1-216ENST00000495910 PSMC1P62191 440 aaKnown RBP5.74□□□□□ -1.49
NF1-216ENST00000495910 ACBD5Q5T8D3 534 aaPredicted RBP5.74□□□□□ -1.49
NF1-216ENST00000495910 NECAB1Q8N987 351 aa5.74□□□□□ -1.49
NF1-216ENST00000495910 MAIP1Q8WWC4 291 aa5.74□□□□□ -1.49
NF1-216ENST00000495910 N4BP2L2Q92802 583 aaPredicted RBP5.74□□□□□ -1.49
NF1-216ENST00000495910 PANK2Q9BZ23 570 aa5.74□□□□□ -1.49
NF1-216ENST00000495910 TRPC5Q9UL62 973 aaPredicted RBP5.74□□□□□ -1.49
NF1-216ENST00000495910 ARIH1Q9Y4X5 557 aaPredicted RBP5.74□□□□□ -1.49
NF1-216ENST00000495910 STX10O60499 249 aa5.73□□□□□ -1.49
NF1-216ENST00000495910 GSTA1P08263 222 aa5.73□□□□□ -1.49
NF1-216ENST00000495910 GSTA2P09210 222 aa5.73□□□□□ -1.49
NF1-216ENST00000495910 HCLS1P14317 486 aaPredicted RBP5.73□□□□□ -1.49
NF1-216ENST00000495910 RAD51AP2Q09MP3 1159 aa5.73□□□□□ -1.49
NF1-216ENST00000495910 AOPEPQ8N6M6 819 aa5.73□□□□□ -1.49
NF1-216ENST00000495910 MGARPQ8TDB4 240 aa5.73□□□□□ -1.49
NF1-216ENST00000495910 ZC3H15Q8WU90 426 aaKnown RBP5.73□□□□□ -1.49
NF1-216ENST00000495910 CHMP6Q96FZ7 201 aa5.73□□□□□ -1.49
NF1-216ENST00000495910 ASIC3Q9UHC3 531 aa5.73□□□□□ -1.49
NF1-216ENST00000495910 RGS16O15492 202 aaPredicted RBP5.73□□□□□ -1.49
NF1-216ENST00000495910 GJB2P29033 226 aa5.73□□□□□ -1.49
NF1-216ENST00000495910 RAB14P61106 215 aa5.73□□□□□ -1.49
NF1-216ENST00000495910 STX1BP61266 288 aa5.73□□□□□ -1.49
NF1-216ENST00000495910 CEP78Q5JTW2 689 aa5.73□□□□□ -1.49
NF1-216ENST00000495910 VPS37BQ9H9H4 285 aa5.73□□□□□ -1.49
NF1-216ENST00000495910 UTP6Q9NYH9 597 aaKnown RBP5.73□□□□□ -1.49
NF1-216ENST00000495910 NOB1Q9ULX3 412 aaKnown RBP5.73□□□□□ -1.49
NF1-216ENST00000495910 NBPF7P0C2Y1 421 aaPredicted RBP5.73□□□□□ -1.49
NF1-216ENST00000495910 GNL1P36915 607 aaPredicted RBP5.73□□□□□ -1.49
NF1-216ENST00000495910 IGHMBP2P38935 993 aaKnown RBP5.73□□□□□ -1.49
NF1-216ENST00000495910 PSME1Q06323 249 aa5.73□□□□□ -1.49
NF1-216ENST00000495910 CEP55Q53EZ4 464 aa5.73□□□□□ -1.49
NF1-216ENST00000495910 EP400NLQ6ZTU2 488 aa5.73□□□□□ -1.49
NF1-216ENST00000495910 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP5.73□□□□□ -1.49
NF1-216ENST00000495910 RBM42Q9BTD8 480 aaKnown RBP5.73□□□□□ -1.49
NF1-216ENST00000495910 ATP11BQ9Y2G3 1177 aa5.73□□□□□ -1.49
NF1-216ENST00000495910 CAB39Q9Y376 341 aaPredicted RBP5.73□□□□□ -1.49
NF1-216ENST00000495910 PYGBP11216 843 aa5.73□□□□□ -1.49
NF1-216ENST00000495910 IARSP41252 1262 aaKnown RBP5.73□□□□□ -1.49
NF1-216ENST00000495910 TWISTNBQ3B726 338 aaPredicted RBP5.73□□□□□ -1.49
NF1-216ENST00000495910 SREK1IP1Q8N9Q2 155 aaPredicted RBP5.73□□□□□ -1.49
NF1-216ENST00000495910 GOLGA5Q8TBA6 731 aa5.73□□□□□ -1.49
NF1-216ENST00000495910 TTC1Q99614 292 aa5.73□□□□□ -1.49
NF1-216ENST00000495910 HELLSQ9NRZ9 838 aa5.73□□□□□ -1.49
NF1-216ENST00000495910 ZNF652Q9Y2D9 606 aa5.73□□□□□ -1.49
NF1-216ENST00000495910 ARHGAP35Q9NRY4 1499 aa5.73□□□□□ -1.49
NF1-216ENST00000495910 IFIT3O14879 490 aaKnown RBP5.73□□□□□ -1.49
NF1-216ENST00000495910 RANBP6O60518 1105 aaKnown RBP5.73□□□□□ -1.49
NF1-216ENST00000495910 CASC4Q6P4E1 433 aa5.73□□□□□ -1.49
NF1-216ENST00000495910 OR9Q1Q8NGQ5 310 aa5.73□□□□□ -1.49
NF1-216ENST00000495910 NAP1L4Q99733 375 aaKnown RBP5.73□□□□□ -1.49
NF1-216ENST00000495910 C6orf203Q9P0P8 240 aaPredicted RBP5.73□□□□□ -1.49
NF1-216ENST00000495910 RAD54L2Q9Y4B4 1467 aa5.73□□□□□ -1.49
NF1-216ENST00000495910 ZNF263O14978 683 aa5.73□□□□□ -1.49
NF1-216ENST00000495910 ASPHQ12797 758 aa5.73□□□□□ -1.49
NF1-216ENST00000495910 ATF7IPQ6VMQ6 1270 aa5.73□□□□□ -1.49
NF1-216ENST00000495910 CCDC13Q8IYE1 715 aa5.73□□□□□ -1.49
NF1-216ENST00000495910 TRIM63Q969Q1 353 aa5.73□□□□□ -1.49
NF1-216ENST00000495910 TUBB6Q9BUF5 446 aa5.73□□□□□ -1.49
NF1-216ENST00000495910 TTF2Q9UNY4 1162 aaKnown RBP5.73□□□□□ -1.49
NF1-216ENST00000495910 CCDC7Q96M83 1385 aa5.73□□□□□ -1.49
NF1-216ENST00000495910 ZNF213O14771 459 aa5.72□□□□□ -1.49
NF1-216ENST00000495910 HMOX1P09601 288 aa5.72□□□□□ -1.49
NF1-216ENST00000495910 AFMP43652 599 aa5.72□□□□□ -1.49
NF1-216ENST00000495910 MCF2L2Q86YR7 1114 aa5.72□□□□□ -1.49
NF1-216ENST00000495910 CNPY4Q8N129 248 aa5.72□□□□□ -1.49
NF1-216ENST00000495910 HDAC11Q96DB2 347 aa5.72□□□□□ -1.49
NF1-216ENST00000495910 TRIM15Q9C019 465 aa5.72□□□□□ -1.49
NF1-216ENST00000495910 ATP6V0A4Q9HBG4 840 aa5.72□□□□□ -1.49
NF1-216ENST00000495910 CNGB3Q9NQW8 809 aa5.72□□□□□ -1.49
NF1-216ENST00000495910 RBM27Q9P2N5 1060 aaKnown RBP5.72□□□□□ -1.49
NF1-216ENST00000495910 DCDC2Q9UHG0 476 aa5.72□□□□□ -1.49
NF1-216ENST00000495910 GOLGA8CPA6NN73 597 aa5.72□□□□□ -1.49
NF1-216ENST00000495910 TNNC2P02585 160 aa5.72□□□□□ -1.49
NF1-216ENST00000495910 DDIT3P35638 169 aa5.72□□□□□ -1.49
NF1-216ENST00000495910 ASIC1P78348 528 aa5.72□□□□□ -1.49
NF1-216ENST00000495910 KRT71Q3SY84 523 aa5.72□□□□□ -1.49
NF1-216ENST00000495910 CFAP70Q5T0N1 1121 aa5.72□□□□□ -1.49
NF1-216ENST00000495910 TRIM42Q8IWZ5 723 aa5.72□□□□□ -1.49
NF1-216ENST00000495910 EFCAB13Q8IY85 973 aa5.72□□□□□ -1.49
NF1-216ENST00000495910 STX19Q8N4C7 294 aa5.72□□□□□ -1.49
NF1-216ENST00000495910 TUBGCP3Q96CW5 907 aa5.72□□□□□ -1.49
NF1-216ENST00000495910 TSKSQ9UJT2 592 aa5.72□□□□□ -1.49
NF1-216ENST00000495910 BZW2Q9Y6E2 419 aaKnown RBP5.72□□□□□ -1.49
NF1-216ENST00000495910 HMGXB3Q12766 1538 aa5.72□□□□□ -1.49
NF1-216ENST00000495910 PFDN6O15212 129 aa5.72□□□□□ -1.49
NF1-216ENST00000495910 KIF1CO43896 1103 aaKnown RBP5.72□□□□□ -1.49
NF1-216ENST00000495910 GPC4O75487 556 aa5.72□□□□□ -1.49
NF1-216ENST00000495910 TBC1D8O95759 1140 aa5.72□□□□□ -1.49
NF1-216ENST00000495910 TNFAIP3P21580 790 aa5.72□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms