RNA–Protein interactions for RNA: ENST00000495805.5

PSMB4-207, Transcript of proteasome subunit beta 4, humanhuman

TSL 2

Gene PSMB4, Length 811 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMB4-207ENST00000495805 WBP1LQ9NX94 342 aa16.35■□□□□ 0.21
PSMB4-207ENST00000495805 GLRX3O76003 335 aaKnown RBP16.34■□□□□ 0.21
PSMB4-207ENST00000495805 HSPA1AP0DMV8 641 aaKnown RBP16.34■□□□□ 0.21
PSMB4-207ENST00000495805 HSPA1BP0DMV9 641 aaKnown RBP16.34■□□□□ 0.21
PSMB4-207ENST00000495805 PDE6AP16499 860 aa16.34■□□□□ 0.21
PSMB4-207ENST00000495805 MX1P20591 662 aa16.34■□□□□ 0.21
PSMB4-207ENST00000495805 KIF23Q02241 960 aaPredicted RBP16.34■□□□□ 0.21
PSMB4-207ENST00000495805 LRRFIP1Q32MZ4 808 aaKnown RBP16.34■□□□□ 0.21
PSMB4-207ENST00000495805 MIGA2Q7L4E1 593 aa16.34■□□□□ 0.21
PSMB4-207ENST00000495805 ZFPM1Q8IX07 1006 aa16.34■□□□□ 0.21
PSMB4-207ENST00000495805 DHX36Q9H2U1 1008 aaKnown RBP16.34■□□□□ 0.21
PSMB4-207ENST00000495805 DDX4Q9NQI0 724 aaKnown RBP16.34■□□□□ 0.21
PSMB4-207ENST00000495805 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.34■□□□□ 0.21
PSMB4-207ENST00000495805 RFX7Q2KHR2 1363 aa16.34■□□□□ 0.21
PSMB4-207ENST00000495805 CA12O43570 354 aa16.33■□□□□ 0.2
PSMB4-207ENST00000495805 ZBTB48P10074 688 aaPredicted RBP16.33■□□□□ 0.2
PSMB4-207ENST00000495805 MIGA1Q8NAN2 632 aa16.33■□□□□ 0.2
PSMB4-207ENST00000495805 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.33■□□□□ 0.2
PSMB4-207ENST00000495805 TGFBRAP1Q8WUH2 860 aa16.33■□□□□ 0.2
PSMB4-207ENST00000495805 EDC3Q96F86 508 aaKnown RBP16.33■□□□□ 0.2
PSMB4-207ENST00000495805 WRNIP1Q96S55 665 aa16.33■□□□□ 0.2
PSMB4-207ENST00000495805 OSBPL5Q9H0X9 879 aaPredicted RBP16.33■□□□□ 0.2
PSMB4-207ENST00000495805 ZNF532Q9HCE3 1301 aa16.33■□□□□ 0.2
PSMB4-207ENST00000495805 THSD7BQ9C0I4 1608 aa16.33■□□□□ 0.2
PSMB4-207ENST00000495805 MAGEB6P1A0A0J9YX57 407 aa16.32■□□□□ 0.2
PSMB4-207ENST00000495805 IGHDP01880 384 aa16.32■□□□□ 0.2
PSMB4-207ENST00000495805 COL2A1P02458 1487 aaPredicted RBP16.32■□□□□ 0.2
PSMB4-207ENST00000495805 INHBEP58166 350 aa16.32■□□□□ 0.2
PSMB4-207ENST00000495805 DYNLL1P63167 89 aaKnown RBP16.32■□□□□ 0.2
PSMB4-207ENST00000495805 SREBF2Q12772 1141 aa16.32■□□□□ 0.2
PSMB4-207ENST00000495805 ATRNL1Q5VV63 1379 aa16.32■□□□□ 0.2
PSMB4-207ENST00000495805 SPRYD7Q5W111 196 aa16.32■□□□□ 0.2
PSMB4-207ENST00000495805 B4GALNT3Q6L9W6 998 aa16.32■□□□□ 0.2
PSMB4-207ENST00000495805 DOCK2Q92608 1830 aa16.32■□□□□ 0.2
PSMB4-207ENST00000495805 CLMNQ96JQ2 1002 aa16.32■□□□□ 0.2
PSMB4-207ENST00000495805 DDTLA6NHG4 134 aaPredicted RBP16.31■□□□□ 0.2
PSMB4-207ENST00000495805 ADD2P35612 726 aa16.31■□□□□ 0.2
PSMB4-207ENST00000495805 USP5P45974 858 aa16.31■□□□□ 0.2
PSMB4-207ENST00000495805 VGLL4Q14135 290 aa16.31■□□□□ 0.2
PSMB4-207ENST00000495805 UBE3CQ15386 1083 aa16.31■□□□□ 0.2
PSMB4-207ENST00000495805 TSHZ3Q63HK5 1081 aa16.31■□□□□ 0.2
PSMB4-207ENST00000495805 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.31■□□□□ 0.2
PSMB4-207ENST00000495805 CHD1LQ86WJ1 897 aa16.31■□□□□ 0.2
PSMB4-207ENST00000495805 MAPKAPK5Q8IW41 473 aa16.31■□□□□ 0.2
PSMB4-207ENST00000495805 KBTBD3Q8NAB2 608 aa16.31■□□□□ 0.2
PSMB4-207ENST00000495805 CRNKL1Q9BZJ0 848 aaKnown RBP16.31■□□□□ 0.2
PSMB4-207ENST00000495805 ELP3Q9H9T3 547 aa16.31■□□□□ 0.2
PSMB4-207ENST00000495805 FLT1P17948 1338 aa16.3■□□□□ 0.2
PSMB4-207ENST00000495805 AK9Q5TCS8 1911 aa16.3■□□□□ 0.2
PSMB4-207ENST00000495805 TCRBV5S4A2TA0A5A2 114 aa16.3■□□□□ 0.2
PSMB4-207ENST00000495805 MANSC4A6NHS7 340 aaPredicted RBP16.3■□□□□ 0.2
PSMB4-207ENST00000495805 TBC1D12O60347 775 aa16.3■□□□□ 0.2
PSMB4-207ENST00000495805 ZFYP08048 801 aaPredicted RBP16.3■□□□□ 0.2
PSMB4-207ENST00000495805 CTCFP49711 727 aaPredicted RBP16.3■□□□□ 0.2
PSMB4-207ENST00000495805 MAP3K10Q02779 954 aa16.3■□□□□ 0.2
PSMB4-207ENST00000495805 NUCB1Q02818 461 aa16.3■□□□□ 0.2
PSMB4-207ENST00000495805 SH3BP5LQ7L8J4 393 aa16.3■□□□□ 0.2
PSMB4-207ENST00000495805 OTUD7AQ8TE49 926 aaPredicted RBP16.3■□□□□ 0.2
PSMB4-207ENST00000495805 WNK4Q96J92 1243 aa16.3■□□□□ 0.2
PSMB4-207ENST00000495805 ZIC5Q96T25 663 aa16.3■□□□□ 0.2
PSMB4-207ENST00000495805 LNPKQ9C0E8 428 aa16.3■□□□□ 0.2
PSMB4-207ENST00000495805 PI4KBQ9UBF8 816 aa16.3■□□□□ 0.2
PSMB4-207ENST00000495805 STAP2Q9UGK3 403 aa16.3■□□□□ 0.2
PSMB4-207ENST00000495805 ZNF112Q9UJU3 913 aa16.3■□□□□ 0.2
PSMB4-207ENST00000495805 MYO5AQ9Y4I1 1855 aaKnown RBP16.3■□□□□ 0.2
PSMB4-207ENST00000495805 HLA-DOAP06340 250 aa16.29■□□□□ 0.2
PSMB4-207ENST00000495805 PDE1AP54750 535 aa16.29■□□□□ 0.2
PSMB4-207ENST00000495805 MKRN3Q13064 507 aaKnown RBP16.29■□□□□ 0.2
PSMB4-207ENST00000495805 ERO1BQ86YB8 467 aa16.29■□□□□ 0.2
PSMB4-207ENST00000495805 PI4K2BQ8TCG2 481 aa16.29■□□□□ 0.2
PSMB4-207ENST00000495805 ZKSCAN4Q969J2 545 aaPredicted RBP16.29■□□□□ 0.2
PSMB4-207ENST00000495805 OPTNQ96CV9 577 aa16.29■□□□□ 0.2
PSMB4-207ENST00000495805 RIOK1Q9BRS2 568 aaKnown RBP16.29■□□□□ 0.2
PSMB4-207ENST00000495805 TRIM34Q9BYJ4 488 aa16.29■□□□□ 0.2
PSMB4-207ENST00000495805 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.29■□□□□ 0.2
PSMB4-207ENST00000495805 HERC5Q9UII4 1024 aaKnown RBP16.29■□□□□ 0.2
PSMB4-207ENST00000495805 FOXN1O15353 648 aa16.28■□□□□ 0.2
PSMB4-207ENST00000495805 TM4SF4P48230 202 aa16.28■□□□□ 0.2
PSMB4-207ENST00000495805 FOXP4Q8IVH2 680 aaPredicted RBP16.28■□□□□ 0.2
PSMB4-207ENST00000495805 PICK1Q9NRD5 415 aa16.28■□□□□ 0.2
PSMB4-207ENST00000495805 SALL3Q9BXA9 1300 aa16.27■□□□□ 0.2
PSMB4-207ENST00000495805 SPDYE5A6NIY4 337 aa16.27■□□□□ 0.2
PSMB4-207ENST00000495805 RNF113AO15541 343 aaKnown RBP16.27■□□□□ 0.2
PSMB4-207ENST00000495805 CTNND1O60716 968 aaKnown RBP16.27■□□□□ 0.2
PSMB4-207ENST00000495805 INPP5BP32019 993 aa16.27■□□□□ 0.2
PSMB4-207ENST00000495805 TTC6Q86TZ1 520 aa16.27■□□□□ 0.2
PSMB4-207ENST00000495805 CRACR2BQ8N4Y2 399 aaPredicted RBP16.27■□□□□ 0.2
PSMB4-207ENST00000495805 OTUD5Q96G74 571 aa16.27■□□□□ 0.2
PSMB4-207ENST00000495805 DDRGK1Q96HY6 314 aa16.27■□□□□ 0.2
PSMB4-207ENST00000495805 SAGE1Q9NXZ1 904 aa16.27■□□□□ 0.2
PSMB4-207ENST00000495805 PALD1Q9ULE6 856 aa16.27■□□□□ 0.2
PSMB4-207ENST00000495805 SNCAIPQ9Y6H5 919 aa16.27■□□□□ 0.2
PSMB4-207ENST00000495805 PHF20L1A8MW92 1017 aa16.26■□□□□ 0.19
PSMB4-207ENST00000495805 ALDH1A1P00352 501 aa16.26■□□□□ 0.19
PSMB4-207ENST00000495805 GTF2A2P52657 109 aa16.26■□□□□ 0.19
PSMB4-207ENST00000495805 PPATQ06203 517 aa16.26■□□□□ 0.19
PSMB4-207ENST00000495805 NOL9Q5SY16 702 aaKnown RBP16.26■□□□□ 0.19
PSMB4-207ENST00000495805 OTUD7BQ6GQQ9 843 aa16.26■□□□□ 0.19
PSMB4-207ENST00000495805 FSD1Q9BTV5 496 aa16.26■□□□□ 0.19
PSMB4-207ENST00000495805 ATP8A2Q9NTI2 1148 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 290.3 ms