RNA–Protein interactions for RNA: ENST00000495677.1

COL1A1-209, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 3

Gene COL1A1, Length 594 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-209ENST00000495677 INHAP05111 366 aa16.88■□□□□ 0.29
COL1A1-209ENST00000495677 TCP10Q12799 353 aa16.88■□□□□ 0.29
COL1A1-209ENST00000495677 NFIAQ12857 509 aa16.88■□□□□ 0.29
COL1A1-209ENST00000495677 PUM3Q15397 648 aaKnown RBP16.88■□□□□ 0.29
COL1A1-209ENST00000495677 ANKRD44Q8N8A2 993 aa16.88■□□□□ 0.29
COL1A1-209ENST00000495677 ANKLE1Q8NAG6 615 aa16.88■□□□□ 0.29
COL1A1-209ENST00000495677 ATRNL1Q5VV63 1379 aa16.88■□□□□ 0.29
COL1A1-209ENST00000495677 PTPRAP18433 802 aa16.87■□□□□ 0.29
COL1A1-209ENST00000495677 NECAB2Q7Z6G3 386 aa16.87■□□□□ 0.29
COL1A1-209ENST00000495677 SCYL3Q8IZE3 742 aa16.87■□□□□ 0.29
COL1A1-209ENST00000495677 DEFB118Q96PH6 123 aa16.87■□□□□ 0.29
COL1A1-209ENST00000495677 IDI2Q9BXS1 227 aa16.87■□□□□ 0.29
COL1A1-209ENST00000495677 ZHX2Q9Y6X8 837 aa16.87■□□□□ 0.29
COL1A1-209ENST00000495677 ELNP15502 786 aa16.86■□□□□ 0.29
COL1A1-209ENST00000495677 LPIN2Q92539 896 aa16.86■□□□□ 0.29
COL1A1-209ENST00000495677 PAWRQ96IZ0 340 aaKnown RBP16.86■□□□□ 0.29
COL1A1-209ENST00000495677 SALL1Q9NSC2 1324 aa16.86■□□□□ 0.29
COL1A1-209ENST00000495677 PLXNB2O15031 1838 aa16.86■□□□□ 0.29
COL1A1-209ENST00000495677 CUL9Q8IWT3 2517 aa16.86■□□□□ 0.29
COL1A1-209ENST00000495677 ATAD5Q96QE3 1844 aa16.85■□□□□ 0.29
COL1A1-209ENST00000495677 TNPO2O14787 897 aaKnown RBP16.85■□□□□ 0.29
COL1A1-209ENST00000495677 ENTPD3O75355 529 aa16.85■□□□□ 0.29
COL1A1-209ENST00000495677 LRIT3Q3SXY7 679 aa16.85■□□□□ 0.29
COL1A1-209ENST00000495677 COA7Q96BR5 231 aa16.85■□□□□ 0.29
COL1A1-209ENST00000495677 PICK1Q9NRD5 415 aa16.85■□□□□ 0.29
COL1A1-209ENST00000495677 USP40Q9NVE5 1235 aa16.85■□□□□ 0.29
COL1A1-209ENST00000495677 CTNND1O60716 968 aaKnown RBP16.84■□□□□ 0.29
COL1A1-209ENST00000495677 SLC5A1P13866 664 aa16.84■□□□□ 0.29
COL1A1-209ENST00000495677 PRDX5P30044 214 aa16.84■□□□□ 0.29
COL1A1-209ENST00000495677 ZEB1P37275 1124 aaPredicted RBP16.84■□□□□ 0.29
COL1A1-209ENST00000495677 DIXDC1Q155Q3 683 aa16.84■□□□□ 0.29
COL1A1-209ENST00000495677 ZFPM1Q8IX07 1006 aa16.84■□□□□ 0.29
COL1A1-209ENST00000495677 SPINK5Q9NQ38 1064 aaPredicted RBP16.84■□□□□ 0.29
COL1A1-209ENST00000495677 DDX60LQ5H9U9 1706 aaKnown RBP16.84■□□□□ 0.29
COL1A1-209ENST00000495677 LOC285556D6RIA3 1793 aa16.84■□□□□ 0.29
COL1A1-209ENST00000495677 EYA2O00167 538 aa16.83■□□□□ 0.28
COL1A1-209ENST00000495677 LDHBP07195 334 aaKnown RBP16.83■□□□□ 0.28
COL1A1-209ENST00000495677 FAM110CQ1W6H9 321 aa16.83■□□□□ 0.28
COL1A1-209ENST00000495677 GADL1Q6ZQY3 521 aa16.83■□□□□ 0.28
COL1A1-209ENST00000495677 KLHDC4Q8TBB5 520 aa16.83■□□□□ 0.28
COL1A1-209ENST00000495677 FBXO3Q9UK99 471 aa16.83■□□□□ 0.28
COL1A1-209ENST00000495677 STXBP5LQ9Y2K9 1186 aa16.83■□□□□ 0.28
COL1A1-209ENST00000495677 SEMA3EO15041 775 aa16.82■□□□□ 0.28
COL1A1-209ENST00000495677 RFX5P48382 616 aaPredicted RBP16.82■□□□□ 0.28
COL1A1-209ENST00000495677 SMCR8Q8TEV9 937 aaPredicted RBP16.82■□□□□ 0.28
COL1A1-209ENST00000495677 FAM163AQ96GL9 167 aaPredicted RBP16.82■□□□□ 0.28
COL1A1-209ENST00000495677 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.82■□□□□ 0.28
COL1A1-209ENST00000495677 USP44Q9H0E7 712 aa16.82■□□□□ 0.28
COL1A1-209ENST00000495677 AGTPBP1Q9UPW5 1226 aa16.82■□□□□ 0.28
COL1A1-209ENST00000495677 RFX7Q2KHR2 1363 aa16.81■□□□□ 0.28
COL1A1-209ENST00000495677 GAKO14976 1311 aa16.81■□□□□ 0.28
COL1A1-209ENST00000495677 RPTORQ8N122 1335 aa16.81■□□□□ 0.28
COL1A1-209ENST00000495677 TBC1D12O60347 775 aa16.81■□□□□ 0.28
COL1A1-209ENST00000495677 RGS3P49796 1198 aa16.81■□□□□ 0.28
COL1A1-209ENST00000495677 SH3BP5LQ7L8J4 393 aa16.81■□□□□ 0.28
COL1A1-209ENST00000495677 DEFB123Q8N688 67 aa16.81■□□□□ 0.28
COL1A1-209ENST00000495677 PROCA1Q8NCQ7 364 aaPredicted RBP16.81■□□□□ 0.28
COL1A1-209ENST00000495677 GNL3LQ9NVN8 582 aaKnown RBP16.81■□□□□ 0.28
COL1A1-209ENST00000495677 PNMA3Q9UL41 463 aa16.81■□□□□ 0.28
COL1A1-209ENST00000495677 DENND2AQ9ULE3 1009 aa16.81■□□□□ 0.28
COL1A1-209ENST00000495677 LRRFIP2Q9Y608 721 aaKnown RBP16.81■□□□□ 0.28
COL1A1-209ENST00000495677 GCLCP48506 637 aaPredicted RBP16.8■□□□□ 0.28
COL1A1-209ENST00000495677 ATG9AQ7Z3C6 839 aa16.8■□□□□ 0.28
COL1A1-209ENST00000495677 ZGPATQ8N5A5 531 aaKnown RBP16.8■□□□□ 0.28
COL1A1-209ENST00000495677 ANKRD13CQ8N6S4 541 aa16.8■□□□□ 0.28
COL1A1-209ENST00000495677 NBPF3Q9H094 633 aa16.8■□□□□ 0.28
COL1A1-209ENST00000495677 GJD2Q9UKL4 321 aa16.8■□□□□ 0.28
COL1A1-209ENST00000495677 PTPRCP08575 1304 aa16.79■□□□□ 0.28
COL1A1-209ENST00000495677 NPM3O75607 178 aaKnown RBP16.79■□□□□ 0.28
COL1A1-209ENST00000495677 HMGCRP04035 888 aa16.79■□□□□ 0.28
COL1A1-209ENST00000495677 TDHQ8IZJ6 230 aa16.79■□□□□ 0.28
COL1A1-209ENST00000495677 DIS3LQ8TF46 1054 aaKnown RBP16.79■□□□□ 0.28
COL1A1-209ENST00000495677 TBC1D2Q9BYX2 928 aa16.79■□□□□ 0.28
COL1A1-209ENST00000495677 HMX1Q9NP08 348 aaPredicted RBP16.79■□□□□ 0.28
COL1A1-209ENST00000495677 MTMR10Q9NXD2 777 aa16.79■□□□□ 0.28
COL1A1-209ENST00000495677 OGDHLQ9ULD0 1010 aa16.79■□□□□ 0.28
COL1A1-209ENST00000495677 SALL2Q9Y467 1007 aaPredicted RBP16.79■□□□□ 0.28
COL1A1-209ENST00000495677 DDTLA6NHG4 134 aaPredicted RBP16.78■□□□□ 0.28
COL1A1-209ENST00000495677 SLF2Q8IX21 1173 aa16.78■□□□□ 0.28
COL1A1-209ENST00000495677 UNC80Q8N2C7 3258 aa16.77■□□□□ 0.28
COL1A1-209ENST00000495677 CIAO1O76071 339 aa16.77■□□□□ 0.28
COL1A1-209ENST00000495677 ZSCAN29Q8IWY8 852 aaPredicted RBP16.77■□□□□ 0.28
COL1A1-209ENST00000495677 C7orf61Q8IZ16 206 aa16.77■□□□□ 0.28
COL1A1-209ENST00000495677 MRPL50Q8N5N7 158 aaKnown RBP16.77■□□□□ 0.28
COL1A1-209ENST00000495677 OSBPL5Q9H0X9 879 aaPredicted RBP16.77■□□□□ 0.28
COL1A1-209ENST00000495677 PDS5AQ29RF7 1337 aaKnown RBP16.76■□□□□ 0.27
COL1A1-209ENST00000495677 TRIM75PA6NK02 468 aa16.76■□□□□ 0.27
COL1A1-209ENST00000495677 PABPC4Q13310 644 aaKnown RBP eCLIP16.76■□□□□ 0.27
COL1A1-209ENST00000495677 ATP2B3Q16720 1220 aa16.76■□□□□ 0.27
COL1A1-209ENST00000495677 TREML2Q5T2D2 321 aa16.76■□□□□ 0.27
COL1A1-209ENST00000495677 C11orf49Q9H6J7 331 aa16.76■□□□□ 0.27
COL1A1-209ENST00000495677 DDX4Q9NQI0 724 aaKnown RBP16.76■□□□□ 0.27
COL1A1-209ENST00000495677 CEP126Q9P2H0 1117 aa16.76■□□□□ 0.27
COL1A1-209ENST00000495677 ZMYND8Q9ULU4 1186 aaPredicted RBP16.76■□□□□ 0.27
COL1A1-209ENST00000495677 FRMPD3Q5JV73 1810 aa16.75■□□□□ 0.27
COL1A1-209ENST00000495677 MAP4K4O95819 1239 aaPredicted RBP16.75■□□□□ 0.27
COL1A1-209ENST00000495677 MAGEA10P43363 369 aaPredicted RBP16.75■□□□□ 0.27
COL1A1-209ENST00000495677 SH3D19Q5HYK7 790 aa16.75■□□□□ 0.27
COL1A1-209ENST00000495677 MAP3K21Q5TCX8 1036 aa16.75■□□□□ 0.27
COL1A1-209ENST00000495677 MORF4L1Q9UBU8 362 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms