RNA–Protein interactions for RNA: ENST00000495663.1

RAB11FIP3-211, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 2

Gene RAB11FIP3, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-211ENST00000495663 TAF1P21675 1872 aa12.64□□□□□ -0.39
RAB11FIP3-211ENST00000495663 ZBTB7BO15156 539 aaPredicted RBP12.64□□□□□ -0.39
RAB11FIP3-211ENST00000495663 SRGNP10124 158 aa12.64□□□□□ -0.39
RAB11FIP3-211ENST00000495663 NPR1P16066 1061 aa12.64□□□□□ -0.39
RAB11FIP3-211ENST00000495663 CHRNA5P30532 468 aa12.64□□□□□ -0.39
RAB11FIP3-211ENST00000495663 PTSQ03393 145 aa12.64□□□□□ -0.39
RAB11FIP3-211ENST00000495663 SF3B3Q15393 1217 aaKnown RBP12.64□□□□□ -0.39
RAB11FIP3-211ENST00000495663 CRY2Q49AN0 593 aa12.64□□□□□ -0.39
RAB11FIP3-211ENST00000495663 CCDC152Q4G0S7 254 aa12.64□□□□□ -0.39
RAB11FIP3-211ENST00000495663 MASTLQ96GX5 879 aa12.64□□□□□ -0.39
RAB11FIP3-211ENST00000495663 SYT17Q9BSW7 474 aa12.64□□□□□ -0.39
RAB11FIP3-211ENST00000495663 SPEF2Q9C093 1822 aa12.63□□□□□ -0.39
RAB11FIP3-211ENST00000495663 A0A0G2JLW4 131 aa12.63□□□□□ -0.39
RAB11FIP3-211ENST00000495663 FAM181BA6NEQ2 426 aa12.63□□□□□ -0.39
RAB11FIP3-211ENST00000495663 GNAI2P04899 355 aa12.63□□□□□ -0.39
RAB11FIP3-211ENST00000495663 DPEP1P16444 411 aa12.63□□□□□ -0.39
RAB11FIP3-211ENST00000495663 CTSOP43234 321 aaPredicted RBP12.63□□□□□ -0.39
RAB11FIP3-211ENST00000495663 FOXO4P98177 505 aa12.63□□□□□ -0.39
RAB11FIP3-211ENST00000495663 ZNF784Q8NCA9 323 aaPredicted RBP12.63□□□□□ -0.39
RAB11FIP3-211ENST00000495663 NLGN2Q8NFZ4 835 aa12.63□□□□□ -0.39
RAB11FIP3-211ENST00000495663 TTLL11Q8NHH1 800 aa12.63□□□□□ -0.39
RAB11FIP3-211ENST00000495663 INSM2Q96T92 566 aaPredicted RBP12.63□□□□□ -0.39
RAB11FIP3-211ENST00000495663 BICC1Q9H694 974 aaKnown RBP12.63□□□□□ -0.39
RAB11FIP3-211ENST00000495663 CSF1RP07333 972 aa12.62□□□□□ -0.39
RAB11FIP3-211ENST00000495663 ALDH1B1P30837 517 aa12.62□□□□□ -0.39
RAB11FIP3-211ENST00000495663 EPHA10Q5JZY3 1008 aa12.62□□□□□ -0.39
RAB11FIP3-211ENST00000495663 STYK1Q6J9G0 422 aa12.62□□□□□ -0.39
RAB11FIP3-211ENST00000495663 LMBR1LQ6UX01 489 aa12.62□□□□□ -0.39
RAB11FIP3-211ENST00000495663 DDX46Q7L014 1031 aaKnown RBP12.62□□□□□ -0.39
RAB11FIP3-211ENST00000495663 ZNF622Q969S3 477 aaKnown RBP eCLIP12.62□□□□□ -0.39
RAB11FIP3-211ENST00000495663 RBM17Q96I25 401 aaKnown RBP12.62□□□□□ -0.39
RAB11FIP3-211ENST00000495663 KAZALD1Q96I82 304 aa12.62□□□□□ -0.39
RAB11FIP3-211ENST00000495663 ZNF395Q9H8N7 513 aaPredicted RBP12.62□□□□□ -0.39
RAB11FIP3-211ENST00000495663 CHMP3Q9Y3E7 222 aa12.62□□□□□ -0.39
RAB11FIP3-211ENST00000495663 LRRFIP2Q9Y608 721 aaKnown RBP12.62□□□□□ -0.39
RAB11FIP3-211ENST00000495663 ARFGEF1Q9Y6D6 1849 aa12.62□□□□□ -0.39
RAB11FIP3-211ENST00000495663 RTL9Q8NET4 1388 aa12.61□□□□□ -0.39
RAB11FIP3-211ENST00000495663 ERVH48-1M5A8F1 160 aa12.61□□□□□ -0.39
RAB11FIP3-211ENST00000495663 KCNA3P22001 575 aa12.61□□□□□ -0.39
RAB11FIP3-211ENST00000495663 HOXA10P31260 410 aaPredicted RBP12.61□□□□□ -0.39
RAB11FIP3-211ENST00000495663 RABL6Q3YEC7 729 aaPredicted RBP12.61□□□□□ -0.39
RAB11FIP3-211ENST00000495663 CNKSR1Q969H4 720 aa12.61□□□□□ -0.39
RAB11FIP3-211ENST00000495663 CCDC85AQ96PX6 553 aaPredicted RBP12.61□□□□□ -0.39
RAB11FIP3-211ENST00000495663 CRAMP1Q96RY5 1269 aa12.61□□□□□ -0.39
RAB11FIP3-211ENST00000495663 CRBNQ96SW2 442 aa12.61□□□□□ -0.39
RAB11FIP3-211ENST00000495663 PIM2Q9P1W9 311 aa12.61□□□□□ -0.39
RAB11FIP3-211ENST00000495663 SLX4Q8IY92 1834 aa12.6□□□□□ -0.39
RAB11FIP3-211ENST00000495663 TTLL6Q8N841 843 aa12.6□□□□□ -0.39
RAB11FIP3-211ENST00000495663 ANKRD44Q8N8A2 993 aa12.6□□□□□ -0.39
RAB11FIP3-211ENST00000495663 GREM2Q9H772 168 aa12.6□□□□□ -0.39
RAB11FIP3-211ENST00000495663 GOPCQ9HD26 462 aa12.6□□□□□ -0.39
RAB11FIP3-211ENST00000495663 POLMQ9NP87 494 aaPredicted RBP12.6□□□□□ -0.39
RAB11FIP3-211ENST00000495663 ZBTB40Q9NUA8 1239 aa12.6□□□□□ -0.39
RAB11FIP3-211ENST00000495663 ANKRD18BA2A2Z9 1011 aa12.59□□□□□ -0.39
RAB11FIP3-211ENST00000495663 ITGA6P23229 1130 aa12.59□□□□□ -0.39
RAB11FIP3-211ENST00000495663 IFIT5Q13325 482 aaKnown RBP12.59□□□□□ -0.39
RAB11FIP3-211ENST00000495663 GRAPQ13588 217 aa12.59□□□□□ -0.39
RAB11FIP3-211ENST00000495663 CCDC57Q2TAC2 916 aa12.59□□□□□ -0.39
RAB11FIP3-211ENST00000495663 GRAPLQ8TC17 118 aaPredicted RBP12.59□□□□□ -0.39
RAB11FIP3-211ENST00000495663 CDC5LQ99459 802 aaKnown RBP12.59□□□□□ -0.39
RAB11FIP3-211ENST00000495663 C1orf115Q9H7X2 142 aa12.59□□□□□ -0.39
RAB11FIP3-211ENST00000495663 SEC31BQ9NQW1 1179 aa12.59□□□□□ -0.39
RAB11FIP3-211ENST00000495663 LRRC37AA6NMS7 1700 aa12.58□□□□□ -0.4
RAB11FIP3-211ENST00000495663 ADD1P35611 737 aaKnown RBP12.58□□□□□ -0.4
RAB11FIP3-211ENST00000495663 MTX1Q13505 466 aa12.58□□□□□ -0.4
RAB11FIP3-211ENST00000495663 TMEM259Q4ZIN3 620 aa12.58□□□□□ -0.4
RAB11FIP3-211ENST00000495663 DALRD3Q5D0E6 543 aaKnown RBP12.58□□□□□ -0.4
RAB11FIP3-211ENST00000495663 PRPF40BQ6NWY9 871 aaKnown RBP12.58□□□□□ -0.4
RAB11FIP3-211ENST00000495663 GPR161Q8N6U8 529 aaKnown RBP12.58□□□□□ -0.4
RAB11FIP3-211ENST00000495663 COL4A1P02462 1669 aa12.57□□□□□ -0.4
RAB11FIP3-211ENST00000495663 BBOX1O75936 387 aa12.57□□□□□ -0.4
RAB11FIP3-211ENST00000495663 IGHMBP2P38935 993 aaKnown RBP12.57□□□□□ -0.4
RAB11FIP3-211ENST00000495663 RPS8P62241 208 aaKnown RBP12.57□□□□□ -0.4
RAB11FIP3-211ENST00000495663 IRX6P78412 446 aaPredicted RBP12.57□□□□□ -0.4
RAB11FIP3-211ENST00000495663 AAMPQ13685 434 aa12.57□□□□□ -0.4
RAB11FIP3-211ENST00000495663 TAF7LQ5H9L4 462 aa12.57□□□□□ -0.4
RAB11FIP3-211ENST00000495663 TMC4Q7Z404 712 aa12.57□□□□□ -0.4
RAB11FIP3-211ENST00000495663 ANKRD18AQ8IVF6 992 aa12.57□□□□□ -0.4
RAB11FIP3-211ENST00000495663 CCDC155Q8N6L0 562 aa12.57□□□□□ -0.4
RAB11FIP3-211ENST00000495663 CELF1Q92879 486 aaKnown RBP12.57□□□□□ -0.4
RAB11FIP3-211ENST00000495663 WWC3Q9ULE0 1092 aa12.57□□□□□ -0.4
RAB11FIP3-211ENST00000495663 BCS1LQ9Y276 419 aa12.57□□□□□ -0.4
RAB11FIP3-211ENST00000495663 SRGAP3O43295 1099 aa12.56□□□□□ -0.4
RAB11FIP3-211ENST00000495663 LILRA1O75019 489 aa12.56□□□□□ -0.4
RAB11FIP3-211ENST00000495663 ADH1AP07327 375 aa12.56□□□□□ -0.4
RAB11FIP3-211ENST00000495663 CEP85Q6P2H3 762 aa12.56□□□□□ -0.4
RAB11FIP3-211ENST00000495663 RPAP2Q8IXW5 612 aaPredicted RBP12.56□□□□□ -0.4
RAB11FIP3-211ENST00000495663 EXOC6Q8TAG9 804 aa12.56□□□□□ -0.4
RAB11FIP3-211ENST00000495663 MPHOSPH8Q99549 860 aa12.56□□□□□ -0.4
RAB11FIP3-211ENST00000495663 TMX4Q9H1E5 349 aaPredicted RBP12.56□□□□□ -0.4
RAB11FIP3-211ENST00000495663 CYLDQ9NQC7 956 aa12.56□□□□□ -0.4
RAB11FIP3-211ENST00000495663 PCDHB9Q9Y5E1 797 aa12.56□□□□□ -0.4
RAB11FIP3-211ENST00000495663 A0A1B0GUL6 1792 aa12.56□□□□□ -0.4
RAB11FIP3-211ENST00000495663 ESPNB1AK53 854 aa12.55□□□□□ -0.4
RAB11FIP3-211ENST00000495663 NEFLP07196 543 aa12.55□□□□□ -0.4
RAB11FIP3-211ENST00000495663 ATP8B2P98198 1209 aa12.55□□□□□ -0.4
RAB11FIP3-211ENST00000495663 FER1L6Q2WGJ9 1857 aa12.55□□□□□ -0.4
RAB11FIP3-211ENST00000495663 PNMA6EA0A0J9YXQ4 647 aa12.54□□□□□ -0.4
RAB11FIP3-211ENST00000495663 C21orf2O43822 256 aa12.54□□□□□ -0.4
RAB11FIP3-211ENST00000495663 FBXO45P0C2W1 286 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms