RNA–Protein interactions for RNA: ENST00000495643.1

DCTN1-223, Transcript of dynactin subunit 1, human

TSL 3

Gene DCTN1, Length 673 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DCTN1-223	ENST00000495643	IFNL1	Q8IU54	200 aa		13.4	□□□□□ -0.26
DCTN1-223	ENST00000495643	ZKSCAN4	Q969J2	545 aa	Predicted RBP	13.4	□□□□□ -0.26
DCTN1-223	ENST00000495643	MS4A4A	Q96JQ5	239 aa		13.4	□□□□□ -0.26
DCTN1-223	ENST00000495643	YTHDC1	Q96MU7	727 aa	Known RBP	13.4	□□□□□ -0.26
DCTN1-223	ENST00000495643	PIH1D3	Q9NQM4	214 aa	Known RBP	13.4	□□□□□ -0.26
DCTN1-223	ENST00000495643	FOCAD	Q5VW36	1801 aa		13.39	□□□□□ -0.27
DCTN1-223	ENST00000495643	DDTL	A6NHG4	134 aa	Predicted RBP	13.39	□□□□□ -0.27
DCTN1-223	ENST00000495643	SPDYE5	A6NIY4	337 aa		13.39	□□□□□ -0.27
DCTN1-223	ENST00000495643	APBB1	O00213	710 aa		13.39	□□□□□ -0.27
DCTN1-223	ENST00000495643	IGF2BP3	O00425	579 aa	Known RBP eCLIP	13.39	□□□□□ -0.27
DCTN1-223	ENST00000495643	NOM1	Q5C9Z4	860 aa	Known RBP	13.39	□□□□□ -0.27
DCTN1-223	ENST00000495643	NAA16	Q6N069	864 aa	Predicted RBP	13.39	□□□□□ -0.27
DCTN1-223	ENST00000495643	ADGRA1	Q86SQ6	560 aa		13.39	□□□□□ -0.27
DCTN1-223	ENST00000495643	CLASRP	Q8N2M8	674 aa	Known RBP	13.39	□□□□□ -0.27
DCTN1-223	ENST00000495643	PTPN18	Q99952	460 aa		13.39	□□□□□ -0.27
DCTN1-223	ENST00000495643	R3HDML	Q9H3Y0	253 aa		13.39	□□□□□ -0.27
DCTN1-223	ENST00000495643	ALDH1A1	P00352	501 aa		13.38	□□□□□ -0.27
DCTN1-223	ENST00000495643	INPP5B	P32019	993 aa		13.38	□□□□□ -0.27
DCTN1-223	ENST00000495643	RRP1	P56182	461 aa	Known RBP	13.38	□□□□□ -0.27
DCTN1-223	ENST00000495643	PPP4C	P60510	307 aa		13.38	□□□□□ -0.27
DCTN1-223	ENST00000495643	PICALM	Q13492	652 aa		13.38	□□□□□ -0.27
DCTN1-223	ENST00000495643	ERO1B	Q86YB8	467 aa		13.38	□□□□□ -0.27
DCTN1-223	ENST00000495643	NDUFB9	Q9Y6M9	179 aa		13.38	□□□□□ -0.27
DCTN1-223	ENST00000495643	COL2A1	P02458	1487 aa	Predicted RBP	13.37	□□□□□ -0.27
DCTN1-223	ENST00000495643	PHF20L1	A8MW92	1017 aa		13.37	□□□□□ -0.27
DCTN1-223	ENST00000495643	GPR25	O00155	361 aa		13.37	□□□□□ -0.27
DCTN1-223	ENST00000495643	GTF2A2	P52657	109 aa		13.37	□□□□□ -0.27
DCTN1-223	ENST00000495643	NOL9	Q5SY16	702 aa	Known RBP	13.37	□□□□□ -0.27
DCTN1-223	ENST00000495643	SH3RF3	Q8TEJ3	882 aa	Predicted RBP	13.37	□□□□□ -0.27
DCTN1-223	ENST00000495643	BRI3BP	Q8WY22	251 aa		13.37	□□□□□ -0.27
DCTN1-223	ENST00000495643	OTUD5	Q96G74	571 aa		13.37	□□□□□ -0.27
DCTN1-223	ENST00000495643	ANTXR1	Q9H6X2	564 aa		13.37	□□□□□ -0.27
DCTN1-223	ENST00000495643	AATF	Q9NY61	560 aa	Known RBP eCLIP	13.37	□□□□□ -0.27
DCTN1-223	ENST00000495643	IRF6	O14896	467 aa		13.36	□□□□□ -0.27
DCTN1-223	ENST00000495643	CAPN15	O75808	1086 aa		13.36	□□□□□ -0.27
DCTN1-223	ENST00000495643	BAG3	O95817	575 aa		13.36	□□□□□ -0.27
DCTN1-223	ENST00000495643	IFIT2	P09913	472 aa	Known RBP	13.36	□□□□□ -0.27
DCTN1-223	ENST00000495643	SLURP2	P0DP57	97 aa		13.36	□□□□□ -0.27
DCTN1-223	ENST00000495643	PPAT	Q06203	517 aa		13.36	□□□□□ -0.27
DCTN1-223	ENST00000495643	PPIL2	Q13356	520 aa		13.36	□□□□□ -0.27
DCTN1-223	ENST00000495643	ZSCAN29	Q8IWY8	852 aa	Predicted RBP	13.36	□□□□□ -0.27
DCTN1-223	ENST00000495643	TEX11	Q8IYF3	940 aa		13.36	□□□□□ -0.27
DCTN1-223	ENST00000495643	PPIL4	Q8WUA2	492 aa	Known RBP eCLIP	13.36	□□□□□ -0.27
DCTN1-223	ENST00000495643	ZNF296	Q8WUU4	475 aa	Predicted RBP	13.36	□□□□□ -0.27
DCTN1-223	ENST00000495643	ABHD8	Q96I13	439 aa		13.36	□□□□□ -0.27
DCTN1-223	ENST00000495643	NOL10	Q9BSC4	688 aa	Known RBP	13.36	□□□□□ -0.27
DCTN1-223	ENST00000495643	MCOLN1	Q9GZU1	580 aa		13.36	□□□□□ -0.27
DCTN1-223	ENST00000495643	SIPA1L1	O43166	1804 aa		13.36	□□□□□ -0.27
DCTN1-223	ENST00000495643	PHIP	Q8WWQ0	1821 aa		13.35	□□□□□ -0.27
DCTN1-223	ENST00000495643	CCL15-CCL14	A0A0B4J2E2	113 aa		13.35	□□□□□ -0.27
DCTN1-223	ENST00000495643	TBC1D12	O60347	775 aa		13.35	□□□□□ -0.27
DCTN1-223	ENST00000495643	IDH1	O75874	414 aa	Known RBP	13.35	□□□□□ -0.27
DCTN1-223	ENST00000495643	PLCG2	P16885	1265 aa		13.35	□□□□□ -0.27
DCTN1-223	ENST00000495643	CYP7A1	P22680	504 aa		13.35	□□□□□ -0.27
DCTN1-223	ENST00000495643	DGKZ	Q13574	1117 aa		13.35	□□□□□ -0.27
DCTN1-223	ENST00000495643	CCL15	Q16663	113 aa		13.35	□□□□□ -0.27
DCTN1-223	ENST00000495643	OTUD7B	Q6GQQ9	843 aa		13.35	□□□□□ -0.27
DCTN1-223	ENST00000495643	TMED8	Q6PL24	325 aa	Predicted RBP	13.35	□□□□□ -0.27
DCTN1-223	ENST00000495643	LRRCC1	Q9C099	1032 aa		13.35	□□□□□ -0.27
DCTN1-223	ENST00000495643	OSBPL5	Q9H0X9	879 aa	Predicted RBP	13.35	□□□□□ -0.27
DCTN1-223	ENST00000495643	DCTPP1	Q9H773	170 aa		13.35	□□□□□ -0.27
DCTN1-223	ENST00000495643	DOCK1	Q14185	1865 aa		13.35	□□□□□ -0.27
DCTN1-223	ENST00000495643	CETP	P11597	493 aa		13.34	□□□□□ -0.27
DCTN1-223	ENST00000495643	DYNLL1	P63167	89 aa	Known RBP	13.34	□□□□□ -0.27
DCTN1-223	ENST00000495643	MAP3K12	Q12852	859 aa		13.34	□□□□□ -0.27
DCTN1-223	ENST00000495643	CRHR2	Q13324	411 aa		13.34	□□□□□ -0.27
DCTN1-223	ENST00000495643	MAGEB6	Q8N7X4	407 aa		13.34	□□□□□ -0.27
DCTN1-223	ENST00000495643	KCNH4	Q9UQ05	1017 aa		13.34	□□□□□ -0.27
DCTN1-223	ENST00000495643	PCDHB15	Q9Y5E8	787 aa		13.34	□□□□□ -0.27
DCTN1-223	ENST00000495643	SMARCA5	O60264	1052 aa	Predicted RBP	13.33	□□□□□ -0.28
DCTN1-223	ENST00000495643	CTNND1	O60716	968 aa	Known RBP	13.33	□□□□□ -0.28
DCTN1-223	ENST00000495643	FKTN	O75072	461 aa		13.33	□□□□□ -0.28
DCTN1-223	ENST00000495643	ATP5J	P18859	108 aa		13.33	□□□□□ -0.28
DCTN1-223	ENST00000495643	SNAPC2	Q13487	334 aa		13.33	□□□□□ -0.28
DCTN1-223	ENST00000495643	TTF1	Q15361	905 aa	Predicted RBP	13.33	□□□□□ -0.28
DCTN1-223	ENST00000495643	CTU1	Q7Z7A3	348 aa	Known RBP	13.33	□□□□□ -0.28
DCTN1-223	ENST00000495643	SCYL3	Q8IZE3	742 aa		13.33	□□□□□ -0.28
DCTN1-223	ENST00000495643	FAM43A	Q8N2R8	423 aa		13.33	□□□□□ -0.28
DCTN1-223	ENST00000495643	TGFBRAP1	Q8WUH2	860 aa		13.33	□□□□□ -0.28
DCTN1-223	ENST00000495643	BCL11A	Q9H165	835 aa		13.33	□□□□□ -0.28
DCTN1-223	ENST00000495643	ATAD5	Q96QE3	1844 aa		13.33	□□□□□ -0.28
DCTN1-223	ENST00000495643	FLT1	P17948	1338 aa		13.33	□□□□□ -0.28
DCTN1-223	ENST00000495643	MYH1	P12882	1939 aa		13.33	□□□□□ -0.28
DCTN1-223	ENST00000495643	GOLIM4	O00461	696 aa		13.32	□□□□□ -0.28
DCTN1-223	ENST00000495643	PTPRA	P18433	802 aa		13.32	□□□□□ -0.28
DCTN1-223	ENST00000495643	MOGS	Q13724	837 aa		13.32	□□□□□ -0.28
DCTN1-223	ENST00000495643	CERS3	Q8IU89	383 aa		13.32	□□□□□ -0.28
DCTN1-223	ENST00000495643	MAPKAPK5	Q8IW41	473 aa		13.32	□□□□□ -0.28
DCTN1-223	ENST00000495643	MIGA1	Q8NAN2	632 aa		13.32	□□□□□ -0.28
DCTN1-223	ENST00000495643	DNAJC2	Q99543	621 aa	Known RBP	13.32	□□□□□ -0.28
DCTN1-223	ENST00000495643	DHX36	Q9H2U1	1008 aa	Known RBP	13.32	□□□□□ -0.28
DCTN1-223	ENST00000495643	XPO5	Q9HAV4	1204 aa	Known RBP eCLIP	13.32	□□□□□ -0.28
DCTN1-223	ENST00000495643	PTPRF	P10586	1907 aa		13.32	□□□□□ -0.28
DCTN1-223	ENST00000495643	FAM196B	A6NMK8	535 aa		13.31	□□□□□ -0.28
DCTN1-223	ENST00000495643	BTBD19	C9JJ37	291 aa		13.31	□□□□□ -0.28
DCTN1-223	ENST00000495643	PDE6A	P16499	860 aa		13.31	□□□□□ -0.28
DCTN1-223	ENST00000495643	METTL16	Q86W50	562 aa	Known RBP	13.31	□□□□□ -0.28
DCTN1-223	ENST00000495643	EDC3	Q96F86	508 aa	Known RBP	13.31	□□□□□ -0.28
DCTN1-223	ENST00000495643	CRBN	Q96SW2	442 aa		13.31	□□□□□ -0.28
DCTN1-223	ENST00000495643	HAUS7	Q99871	368 aa		13.31	□□□□□ -0.28

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