RNA–Protein interactions for RNA: ENST00000494956.1

NELFE-213, Transcript of negative elongation factor complex member E, humanhuman

TSL 3

Gene NELFE, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-213ENST00000494956 UQCRFS1P1P0C7P4 283 aa13.04□□□□□ -0.32
NELFE-213ENST00000494956 CAP1Q01518 475 aa13.04□□□□□ -0.32
NELFE-213ENST00000494956 CRHR2Q13324 411 aa13.04□□□□□ -0.32
NELFE-213ENST00000494956 CCL15Q16663 113 aa13.04□□□□□ -0.32
NELFE-213ENST00000494956 CCDC158Q5M9N0 1113 aa13.04□□□□□ -0.32
NELFE-213ENST00000494956 DCAF15Q66K64 600 aa13.04□□□□□ -0.32
NELFE-213ENST00000494956 CTU1Q7Z7A3 348 aaKnown RBP13.04□□□□□ -0.32
NELFE-213ENST00000494956 ADGRA1Q86SQ6 560 aa13.04□□□□□ -0.32
NELFE-213ENST00000494956 FAM43AQ8N2R8 423 aa13.04□□□□□ -0.32
NELFE-213ENST00000494956 FAM163AQ96GL9 167 aaPredicted RBP13.04□□□□□ -0.32
NELFE-213ENST00000494956 IDI2Q9BXS1 227 aa13.04□□□□□ -0.32
NELFE-213ENST00000494956 ZNF341Q9BYN7 854 aa13.04□□□□□ -0.32
NELFE-213ENST00000494956 RNF39Q9H2S5 420 aa13.04□□□□□ -0.32
NELFE-213ENST00000494956 PIH1D3Q9NQM4 214 aaKnown RBP13.04□□□□□ -0.32
NELFE-213ENST00000494956 LRP2BPQ9P2M1 347 aa13.04□□□□□ -0.32
NELFE-213ENST00000494956 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.04□□□□□ -0.32
NELFE-213ENST00000494956 ATRNL1Q5VV63 1379 aa13.04□□□□□ -0.32
NELFE-213ENST00000494956 MAST2Q6P0Q8 1798 aa13.04□□□□□ -0.32
NELFE-213ENST00000494956 TESPA1A2RU30 521 aaPredicted RBP13.03□□□□□ -0.32
NELFE-213ENST00000494956 FAM196BA6NMK8 535 aa13.03□□□□□ -0.32
NELFE-213ENST00000494956 IRF6O14896 467 aa13.03□□□□□ -0.32
NELFE-213ENST00000494956 INHBEP58166 350 aa13.03□□□□□ -0.32
NELFE-213ENST00000494956 AACSQ86V21 672 aa13.03□□□□□ -0.32
NELFE-213ENST00000494956 ZSCAN29Q8IWY8 852 aaPredicted RBP13.03□□□□□ -0.32
NELFE-213ENST00000494956 ZBTB40Q9NUA8 1239 aa13.03□□□□□ -0.32
NELFE-213ENST00000494956 ZNF112Q9UJU3 913 aa13.03□□□□□ -0.32
NELFE-213ENST00000494956 DDX19BQ9UMR2 479 aa13.03□□□□□ -0.32
NELFE-213ENST00000494956 ZSWIM8A7E2V4 1837 aa13.03□□□□□ -0.32
NELFE-213ENST00000494956 FKTNO75072 461 aa13.02□□□□□ -0.33
NELFE-213ENST00000494956 ENTPD3O75355 529 aa13.02□□□□□ -0.33
NELFE-213ENST00000494956 ALDH1A1P00352 501 aa13.02□□□□□ -0.33
NELFE-213ENST00000494956 CCDC84Q86UT8 332 aaPredicted RBP13.02□□□□□ -0.33
NELFE-213ENST00000494956 ERO1BQ86YB8 467 aa13.02□□□□□ -0.33
NELFE-213ENST00000494956 SLF2Q8IX21 1173 aa13.02□□□□□ -0.33
NELFE-213ENST00000494956 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.02□□□□□ -0.33
NELFE-213ENST00000494956 RHPN1Q8TCX5 695 aa13.02□□□□□ -0.33
NELFE-213ENST00000494956 SH3RF3Q8TEJ3 882 aaPredicted RBP13.02□□□□□ -0.33
NELFE-213ENST00000494956 CFHR5Q9BXR6 569 aa13.02□□□□□ -0.33
NELFE-213ENST00000494956 ANTXR1Q9H6X2 564 aa13.02□□□□□ -0.33
NELFE-213ENST00000494956 AATFQ9NY61 560 aaKnown RBP eCLIP13.02□□□□□ -0.33
NELFE-213ENST00000494956 PHF20L1A8MW92 1017 aa13.01□□□□□ -0.33
NELFE-213ENST00000494956 ECM2O94769 699 aaPredicted RBP13.01□□□□□ -0.33
NELFE-213ENST00000494956 MS4A1P11836 297 aa13.01□□□□□ -0.33
NELFE-213ENST00000494956 GTF2A2P52657 109 aa13.01□□□□□ -0.33
NELFE-213ENST00000494956 NAA16Q6N069 864 aaPredicted RBP13.01□□□□□ -0.33
NELFE-213ENST00000494956 HOOK2Q96ED9 719 aa13.01□□□□□ -0.33
NELFE-213ENST00000494956 SIPA1L1O43166 1804 aa13.01□□□□□ -0.33
NELFE-213ENST00000494956 DOCK1Q14185 1865 aa13□□□□□ -0.33
NELFE-213ENST00000494956 PHIPQ8WWQ0 1821 aa13□□□□□ -0.33
NELFE-213ENST00000494956 BTBD19C9JJ37 291 aa13□□□□□ -0.33
NELFE-213ENST00000494956 LDHCP07864 332 aa13□□□□□ -0.33
NELFE-213ENST00000494956 DYNLL1P63167 89 aaKnown RBP13□□□□□ -0.33
NELFE-213ENST00000494956 GSTO1P78417 241 aa13□□□□□ -0.33
NELFE-213ENST00000494956 PPIL2Q13356 520 aa13□□□□□ -0.33
NELFE-213ENST00000494956 TAF1CQ15572 869 aaPredicted RBP13□□□□□ -0.33
NELFE-213ENST00000494956 RPAP2Q8IXW5 612 aaPredicted RBP13□□□□□ -0.33
NELFE-213ENST00000494956 CD99L2Q8TCZ2 262 aa13□□□□□ -0.33
NELFE-213ENST00000494956 YTHDC1Q96MU7 727 aaKnown RBP13□□□□□ -0.33
NELFE-213ENST00000494956 FOCADQ5VW36 1801 aa12.99□□□□□ -0.33
NELFE-213ENST00000494956 ATAD5Q96QE3 1844 aa12.99□□□□□ -0.33
NELFE-213ENST00000494956 SOX10P56693 466 aa12.99□□□□□ -0.33
NELFE-213ENST00000494956 PPATQ06203 517 aa12.99□□□□□ -0.33
NELFE-213ENST00000494956 RRP1BQ14684 758 aaKnown RBP12.99□□□□□ -0.33
NELFE-213ENST00000494956 SLC4A8Q2Y0W8 1093 aa12.99□□□□□ -0.33
NELFE-213ENST00000494956 NOM1Q5C9Z4 860 aaKnown RBP12.99□□□□□ -0.33
NELFE-213ENST00000494956 OTUD7BQ6GQQ9 843 aa12.99□□□□□ -0.33
NELFE-213ENST00000494956 TEX11Q8IYF3 940 aa12.99□□□□□ -0.33
NELFE-213ENST00000494956 ZNF512BQ96KM6 892 aaPredicted RBP12.99□□□□□ -0.33
NELFE-213ENST00000494956 OSBPL5Q9H0X9 879 aaPredicted RBP12.99□□□□□ -0.33
NELFE-213ENST00000494956 HPS5Q9UPZ3 1129 aa12.99□□□□□ -0.33
NELFE-213ENST00000494956 PTPRFP10586 1907 aa12.99□□□□□ -0.33
NELFE-213ENST00000494956 IDH1O75874 414 aaKnown RBP12.98□□□□□ -0.33
NELFE-213ENST00000494956 CETPP11597 493 aa12.98□□□□□ -0.33
NELFE-213ENST00000494956 CYP7A1P22680 504 aa12.98□□□□□ -0.33
NELFE-213ENST00000494956 SNAPC2Q13487 334 aa12.98□□□□□ -0.33
NELFE-213ENST00000494956 MOGSQ13724 837 aa12.98□□□□□ -0.33
NELFE-213ENST00000494956 NOL9Q5SY16 702 aaKnown RBP12.98□□□□□ -0.33
NELFE-213ENST00000494956 ERC1Q8IUD2 1116 aa12.98□□□□□ -0.33
NELFE-213ENST00000494956 MAPKAPK5Q8IW41 473 aa12.98□□□□□ -0.33
NELFE-213ENST00000494956 MIGA1Q8NAN2 632 aa12.98□□□□□ -0.33
NELFE-213ENST00000494956 TGFBRAP1Q8WUH2 860 aa12.98□□□□□ -0.33
NELFE-213ENST00000494956 EDC3Q96F86 508 aaKnown RBP12.98□□□□□ -0.33
NELFE-213ENST00000494956 TRIM17Q9Y577 477 aa12.98□□□□□ -0.33
NELFE-213ENST00000494956 PTPRAP18433 802 aa12.97□□□□□ -0.33
NELFE-213ENST00000494956 MAP3K10Q02779 954 aa12.97□□□□□ -0.33
NELFE-213ENST00000494956 PDE3AQ14432 1141 aa12.97□□□□□ -0.33
NELFE-213ENST00000494956 SHROOM1Q2M3G4 852 aaPredicted RBP12.97□□□□□ -0.33
NELFE-213ENST00000494956 OTOP1Q7RTM1 612 aa12.97□□□□□ -0.33
NELFE-213ENST00000494956 SCYL3Q8IZE3 742 aa12.97□□□□□ -0.33
NELFE-213ENST00000494956 MAGEB6Q8N7X4 407 aa12.97□□□□□ -0.33
NELFE-213ENST00000494956 KIF1BPQ96EK5 621 aa12.97□□□□□ -0.33
NELFE-213ENST00000494956 ARHGAP39Q9C0H5 1083 aa12.97□□□□□ -0.33
NELFE-213ENST00000494956 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.97□□□□□ -0.33
NELFE-213ENST00000494956 KCNH4Q9UQ05 1017 aa12.97□□□□□ -0.33
NELFE-213ENST00000494956 ZHX2Q9Y6X8 837 aa12.97□□□□□ -0.33
NELFE-213ENST00000494956 MYH1P12882 1939 aa12.97□□□□□ -0.33
NELFE-213ENST00000494956 SMARCA5O60264 1052 aaPredicted RBP12.96□□□□□ -0.33
NELFE-213ENST00000494956 HMMRO75330 724 aa12.96□□□□□ -0.33
NELFE-213ENST00000494956 SP3Q02447 781 aa12.96□□□□□ -0.33
NELFE-213ENST00000494956 C1QBPQ07021 282 aaKnown RBP12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms