RNA–Protein interactions for RNA: ENST00000494756.1

RPS27A-209, Transcript of ribosomal protein S27a, humanhuman

TSL 2

Gene RPS27A, Length 535 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS27A-209ENST00000494756 SCYL3Q8IZE3 742 aa13□□□□□ -0.33
RPS27A-209ENST00000494756 LPIN2Q92539 896 aa13□□□□□ -0.33
RPS27A-209ENST00000494756 PAK6Q9NQU5 681 aaPredicted RBP13□□□□□ -0.33
RPS27A-209ENST00000494756 SLC45A1Q9Y2W3 748 aa13□□□□□ -0.33
RPS27A-209ENST00000494756 SALL2Q9Y467 1007 aaPredicted RBP13□□□□□ -0.33
RPS27A-209ENST00000494756 UNC80Q8N2C7 3258 aa13□□□□□ -0.33
RPS27A-209ENST00000494756 SLC5A1P13866 664 aa12.99□□□□□ -0.33
RPS27A-209ENST00000494756 ELNP15502 786 aa12.99□□□□□ -0.33
RPS27A-209ENST00000494756 DEFB118Q96PH6 123 aa12.99□□□□□ -0.33
RPS27A-209ENST00000494756 CRISPLD2Q9H0B8 497 aa12.99□□□□□ -0.33
RPS27A-209ENST00000494756 PICK1Q9NRD5 415 aa12.99□□□□□ -0.33
RPS27A-209ENST00000494756 DOCK3Q8IZD9 2030 aa12.99□□□□□ -0.33
RPS27A-209ENST00000494756 ALPK3Q96L96 1907 aa12.99□□□□□ -0.33
RPS27A-209ENST00000494756 SALL1Q9NSC2 1324 aa12.98□□□□□ -0.33
RPS27A-209ENST00000494756 EYA2O00167 538 aa12.98□□□□□ -0.33
RPS27A-209ENST00000494756 TNPO2O14787 897 aaKnown RBP12.98□□□□□ -0.33
RPS27A-209ENST00000494756 PTPRAP18433 802 aa12.98□□□□□ -0.33
RPS27A-209ENST00000494756 ZFPM1Q8IX07 1006 aa12.98□□□□□ -0.33
RPS27A-209ENST00000494756 LRCH3Q96II8 777 aa12.98□□□□□ -0.33
RPS27A-209ENST00000494756 AFG3L2Q9Y4W6 797 aa12.98□□□□□ -0.33
RPS27A-209ENST00000494756 ZHX2Q9Y6X8 837 aa12.98□□□□□ -0.33
RPS27A-209ENST00000494756 DOCK1Q14185 1865 aa12.97□□□□□ -0.33
RPS27A-209ENST00000494756 GAKO14976 1311 aa12.97□□□□□ -0.33
RPS27A-209ENST00000494756 ENTPD3O75355 529 aa12.97□□□□□ -0.33
RPS27A-209ENST00000494756 LDHBP07195 334 aaKnown RBP12.97□□□□□ -0.33
RPS27A-209ENST00000494756 RFX5P48382 616 aaPredicted RBP12.97□□□□□ -0.33
RPS27A-209ENST00000494756 MAP3K10Q02779 954 aa12.97□□□□□ -0.33
RPS27A-209ENST00000494756 SMCR8Q8TEV9 937 aaPredicted RBP12.97□□□□□ -0.33
RPS27A-209ENST00000494756 IDI2Q9BXS1 227 aa12.97□□□□□ -0.33
RPS27A-209ENST00000494756 USP40Q9NVE5 1235 aa12.97□□□□□ -0.33
RPS27A-209ENST00000494756 STAP2Q9UGK3 403 aa12.97□□□□□ -0.33
RPS27A-209ENST00000494756 PHIPQ8WWQ0 1821 aa12.97□□□□□ -0.33
RPS27A-209ENST00000494756 PTPRCP08575 1304 aa12.96□□□□□ -0.33
RPS27A-209ENST00000494756 ZBTB22O15209 634 aa12.96□□□□□ -0.33
RPS27A-209ENST00000494756 TFRCP02786 760 aaKnown RBP12.96□□□□□ -0.33
RPS27A-209ENST00000494756 RGS3P49796 1198 aa12.96□□□□□ -0.33
RPS27A-209ENST00000494756 FAM110CQ1W6H9 321 aa12.96□□□□□ -0.33
RPS27A-209ENST00000494756 GPR153Q6NV75 609 aa12.96□□□□□ -0.33
RPS27A-209ENST00000494756 GADL1Q6ZQY3 521 aa12.96□□□□□ -0.33
RPS27A-209ENST00000494756 SH3BP5LQ7L8J4 393 aa12.96□□□□□ -0.33
RPS27A-209ENST00000494756 GDF15Q99988 308 aa12.96□□□□□ -0.33
RPS27A-209ENST00000494756 USP44Q9H0E7 712 aa12.96□□□□□ -0.33
RPS27A-209ENST00000494756 AGTPBP1Q9UPW5 1226 aa12.96□□□□□ -0.33
RPS27A-209ENST00000494756 LAMA2P24043 3122 aaKnown RBP12.96□□□□□ -0.34
RPS27A-209ENST00000494756 SEMA3EO15041 775 aa12.95□□□□□ -0.34
RPS27A-209ENST00000494756 CTNND1O60716 968 aaKnown RBP12.95□□□□□ -0.34
RPS27A-209ENST00000494756 BMP8BP34820 402 aa12.95□□□□□ -0.34
RPS27A-209ENST00000494756 ATG9AQ7Z3C6 839 aa12.95□□□□□ -0.34
RPS27A-209ENST00000494756 NECAB2Q7Z6G3 386 aa12.95□□□□□ -0.34
RPS27A-209ENST00000494756 ANKLE1Q8NAG6 615 aa12.95□□□□□ -0.34
RPS27A-209ENST00000494756 DIS3LQ8TF46 1054 aaKnown RBP12.95□□□□□ -0.34
RPS27A-209ENST00000494756 PAWRQ96IZ0 340 aaKnown RBP12.95□□□□□ -0.34
RPS27A-209ENST00000494756 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.95□□□□□ -0.341e-6■■□□□ 14.2
RPS27A-209ENST00000494756 MYH2Q9UKX2 1941 aa12.94□□□□□ -0.34
RPS27A-209ENST00000494756 MNX1P50219 401 aaPredicted RBP12.94□□□□□ -0.34
RPS27A-209ENST00000494756 ATP2B3Q16720 1220 aa12.94□□□□□ -0.34
RPS27A-209ENST00000494756 FAM9BQ8IZU0 186 aa12.94□□□□□ -0.34
RPS27A-209ENST00000494756 MRPL50Q8N5N7 158 aaKnown RBP12.94□□□□□ -0.34
RPS27A-209ENST00000494756 ANKRD13CQ8N6S4 541 aa12.94□□□□□ -0.34
RPS27A-209ENST00000494756 COA7Q96BR5 231 aa12.94□□□□□ -0.34
RPS27A-209ENST00000494756 GNL3LQ9NVN8 582 aaKnown RBP12.94□□□□□ -0.34
RPS27A-209ENST00000494756 FBXO3Q9UK99 471 aa12.94□□□□□ -0.34
RPS27A-209ENST00000494756 DENND2AQ9ULE3 1009 aa12.94□□□□□ -0.34
RPS27A-209ENST00000494756 LRRFIP2Q9Y608 721 aaKnown RBP12.94□□□□□ -0.34
RPS27A-209ENST00000494756 VCANP13611 3396 aa12.94□□□□□ -0.34
RPS27A-209ENST00000494756 LOC285556D6RIA3 1793 aa12.94□□□□□ -0.34
RPS27A-209ENST00000494756 DDTLA6NHG4 134 aaPredicted RBP12.93□□□□□ -0.34
RPS27A-209ENST00000494756 TRIM75PA6NK02 468 aa12.93□□□□□ -0.34
RPS27A-209ENST00000494756 CIAO1O76071 339 aa12.93□□□□□ -0.34
RPS27A-209ENST00000494756 HMGCRP04035 888 aa12.93□□□□□ -0.34
RPS27A-209ENST00000494756 PHKA1P46020 1223 aa12.93□□□□□ -0.34
RPS27A-209ENST00000494756 ZSCAN29Q8IWY8 852 aaPredicted RBP12.93□□□□□ -0.34
RPS27A-209ENST00000494756 ZGPATQ8N5A5 531 aaKnown RBP12.93□□□□□ -0.34
RPS27A-209ENST00000494756 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.93□□□□□ -0.34
RPS27A-209ENST00000494756 PNMA3Q9UL41 463 aa12.93□□□□□ -0.34
RPS27A-209ENST00000494756 TAOK2Q9UL54 1235 aa12.93□□□□□ -0.34
RPS27A-209ENST00000494756 ZNF521Q96K83 1311 aa12.92□□□□□ -0.34
RPS27A-209ENST00000494756 SLURP2P0DP57 97 aa12.92□□□□□ -0.34
RPS27A-209ENST00000494756 TREML2Q5T2D2 321 aa12.92□□□□□ -0.34
RPS27A-209ENST00000494756 C7orf61Q8IZ16 206 aa12.92□□□□□ -0.34
RPS27A-209ENST00000494756 MIER1Q8N108 512 aa12.92□□□□□ -0.34
RPS27A-209ENST00000494756 PROCA1Q8NCQ7 364 aaPredicted RBP12.92□□□□□ -0.34
RPS27A-209ENST00000494756 FAM163AQ96GL9 167 aaPredicted RBP12.92□□□□□ -0.34
RPS27A-209ENST00000494756 DDX4Q9NQI0 724 aaKnown RBP12.92□□□□□ -0.34
RPS27A-209ENST00000494756 PDS5AQ29RF7 1337 aaKnown RBP12.91□□□□□ -0.34
RPS27A-209ENST00000494756 TBC1D12O60347 775 aa12.91□□□□□ -0.34
RPS27A-209ENST00000494756 GCLCP48506 637 aaPredicted RBP12.91□□□□□ -0.34
RPS27A-209ENST00000494756 LRIT3Q3SXY7 679 aa12.91□□□□□ -0.34
RPS27A-209ENST00000494756 CCDC84Q86UT8 332 aaPredicted RBP12.91□□□□□ -0.34
RPS27A-209ENST00000494756 DZIP1Q86YF9 867 aaKnown RBP12.91□□□□□ -0.34
RPS27A-209ENST00000494756 CEP126Q9P2H0 1117 aa12.91□□□□□ -0.34
RPS27A-209ENST00000494756 ZMYND8Q9ULU4 1186 aaPredicted RBP12.91□□□□□ -0.34
RPS27A-209ENST00000494756 STXBP5LQ9Y2K9 1186 aa12.91□□□□□ -0.34
RPS27A-209ENST00000494756 COL2A1P02458 1487 aaPredicted RBP12.91□□□□□ -0.34
RPS27A-209ENST00000494756 DDX60LQ5H9U9 1706 aaKnown RBP12.91□□□□□ -0.34
RPS27A-209ENST00000494756 RPTORQ8N122 1335 aa12.9□□□□□ -0.34
RPS27A-209ENST00000494756 NPM3O75607 178 aaKnown RBP12.9□□□□□ -0.34
RPS27A-209ENST00000494756 RASGRF1Q13972 1273 aa12.9□□□□□ -0.34
RPS27A-209ENST00000494756 CCDC102BQ68D86 513 aa12.9□□□□□ -0.34
RPS27A-209ENST00000494756 SLF2Q8IX21 1173 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms