RNA–Protein interactions for RNA: ENST00000494748.1

SDF4-207, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 3,516 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-207ENST00000494748 CCDC151A5D8V7 595 aa17.62■□□□□ 0.41
SDF4-207ENST00000494748 UBE2Q2LH0YL09 131 aa17.62■□□□□ 0.41
SDF4-207ENST00000494748 NTRK3Q16288 839 aa17.62■□□□□ 0.41
SDF4-207ENST00000494748 HSP90AB3PQ58FF7 597 aa17.62■□□□□ 0.41
SDF4-207ENST00000494748 CYB5R4Q7L1T6 521 aa17.62■□□□□ 0.41
SDF4-207ENST00000494748 IQUBQ8NA54 791 aa17.62■□□□□ 0.41
SDF4-207ENST00000494748 GOLGA1Q92805 767 aa17.62■□□□□ 0.41
SDF4-207ENST00000494748 KCNH3Q9ULD8 1083 aa17.62■□□□□ 0.41
SDF4-207ENST00000494748 PRR29P0C7W0 189 aa17.62■□□□□ 0.41
SDF4-207ENST00000494748 STK11IPQ8N1F8 1099 aa17.62■□□□□ 0.41
SDF4-207ENST00000494748 TRIM34Q9BYJ4 488 aa17.62■□□□□ 0.41
SDF4-207ENST00000494748 SEC31BQ9NQW1 1179 aa17.62■□□□□ 0.41
SDF4-207ENST00000494748 NBPF26B4DH59 902 aa17.61■□□□□ 0.41
SDF4-207ENST00000494748 CPLX1O14810 134 aa17.61■□□□□ 0.41
SDF4-207ENST00000494748 RANBP6O60518 1105 aaKnown RBP17.61■□□□□ 0.41
SDF4-207ENST00000494748 CUTAO60888 179 aa17.61■□□□□ 0.41
SDF4-207ENST00000494748 CIAO1O76071 339 aa17.61■□□□□ 0.41
SDF4-207ENST00000494748 ADORA1P30542 326 aa17.61■□□□□ 0.41
SDF4-207ENST00000494748 BEND6Q5SZJ8 279 aaPredicted RBP17.61■□□□□ 0.41
SDF4-207ENST00000494748 NBPF14Q5TI25 921 aa17.61■□□□□ 0.41
SDF4-207ENST00000494748 NBPF10Q6P3W6 841 aaKnown RBP17.61■□□□□ 0.41
SDF4-207ENST00000494748 NBPF15Q8N660 670 aa17.61■□□□□ 0.41
SDF4-207ENST00000494748 GRIN1Q05586 938 aa17.61■□□□□ 0.41
SDF4-207ENST00000494748 OLFM4Q6UX06 510 aa17.61■□□□□ 0.41
SDF4-207ENST00000494748 FAM217BQ9NTX9 383 aaPredicted RBP17.61■□□□□ 0.41
SDF4-207ENST00000494748 RAB21Q9UL25 225 aa17.61■□□□□ 0.41
SDF4-207ENST00000494748 USP5P45974 858 aa17.61■□□□□ 0.41
SDF4-207ENST00000494748 NR1I3Q14994 352 aa17.61■□□□□ 0.41
SDF4-207ENST00000494748 KARSQ15046 597 aaKnown RBP17.61■□□□□ 0.41
SDF4-207ENST00000494748 HNRNPLLQ8WVV9 542 aaKnown RBP17.61■□□□□ 0.41
SDF4-207ENST00000494748 TBC1D10CQ8IV04 446 aa17.6■□□□□ 0.41
SDF4-207ENST00000494748 PNKPQ96T60 521 aa17.6■□□□□ 0.41
SDF4-207ENST00000494748 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.6■□□□□ 0.41
SDF4-207ENST00000494748 ADAMTSL3P82987 1691 aa17.6■□□□□ 0.41
SDF4-207ENST00000494748 MORC3Q14149 939 aa17.6■□□□□ 0.41
SDF4-207ENST00000494748 BRD3Q15059 726 aa17.6■□□□□ 0.41
SDF4-207ENST00000494748 CCDC102BQ68D86 513 aa17.6■□□□□ 0.41
SDF4-207ENST00000494748 PHKBQ93100 1093 aa17.6■□□□□ 0.41
SDF4-207ENST00000494748 NFE2L3Q9Y4A8 694 aa17.6■□□□□ 0.41
SDF4-207ENST00000494748 SH2B2O14492 632 aaPredicted RBP17.6■□□□□ 0.41
SDF4-207ENST00000494748 RXRAP19793 462 aa17.6■□□□□ 0.41
SDF4-207ENST00000494748 RAD9BQ6WBX8 426 aa17.6■□□□□ 0.41
SDF4-207ENST00000494748 CNNM3Q8NE01 707 aa17.6■□□□□ 0.41
SDF4-207ENST00000494748 GOLGA5Q8TBA6 731 aa17.6■□□□□ 0.41
SDF4-207ENST00000494748 ENOX1Q8TC92 643 aaKnown RBP17.6■□□□□ 0.41
SDF4-207ENST00000494748 SOWAHDA6NJG2 315 aa17.59■□□□□ 0.41
SDF4-207ENST00000494748 TOB1P50616 345 aaPredicted RBP17.59■□□□□ 0.41
SDF4-207ENST00000494748 FKBP4Q02790 459 aaKnown RBP eCLIP17.59■□□□□ 0.413e-7■■■■□ 22.6
SDF4-207ENST00000494748 GNL2Q13823 731 aaKnown RBP17.59■□□□□ 0.41
SDF4-207ENST00000494748 JMYQ8N9B5 988 aa17.59■□□□□ 0.41
SDF4-207ENST00000494748 MSANTD4Q8NCY6 345 aa17.59■□□□□ 0.41
SDF4-207ENST00000494748 IPO4Q8TEX9 1081 aaKnown RBP17.59■□□□□ 0.41
SDF4-207ENST00000494748 UBN2Q6ZU65 1347 aa17.59■□□□□ 0.41
SDF4-207ENST00000494748 TRIM66O15016 1216 aa17.59■□□□□ 0.41
SDF4-207ENST00000494748 SPECC1Q5M775 1068 aa17.59■□□□□ 0.41
SDF4-207ENST00000494748 SRGAP1Q7Z6B7 1085 aa17.59■□□□□ 0.41
SDF4-207ENST00000494748 TRMT44Q8IYL2 757 aaKnown RBP17.59■□□□□ 0.41
SDF4-207ENST00000494748 PDILTQ8N807 584 aa17.59■□□□□ 0.41
SDF4-207ENST00000494748 APPBP2Q92624 585 aa17.59■□□□□ 0.41
SDF4-207ENST00000494748 A0A1B0GTH6 734 aa17.59■□□□□ 0.41
SDF4-207ENST00000494748 JAKMIP3Q5VZ66 844 aa17.59■□□□□ 0.41
SDF4-207ENST00000494748 CCDC191Q8NCU4 936 aa17.59■□□□□ 0.41
SDF4-207ENST00000494748 SAMSN1Q9NSI8 373 aaKnown RBP17.59■□□□□ 0.41
SDF4-207ENST00000494748 ANGEL1Q9UNK9 670 aaKnown RBP17.59■□□□□ 0.41
SDF4-207ENST00000494748 ATRNO75882 1429 aa17.58■□□□□ 0.41
SDF4-207ENST00000494748 MYO1CO00159 1063 aa17.58■□□□□ 0.41
SDF4-207ENST00000494748 ZNF827Q17R98 1081 aa17.58■□□□□ 0.41
SDF4-207ENST00000494748 APOA5Q6Q788 366 aa17.58■□□□□ 0.41
SDF4-207ENST00000494748 MSL3Q8N5Y2 521 aaKnown RBP17.58■□□□□ 0.41
SDF4-207ENST00000494748 CCDC12Q8WUD4 166 aaPredicted RBP17.58■□□□□ 0.41
SDF4-207ENST00000494748 RAI14Q9P0K7 980 aa17.58■□□□□ 0.41
SDF4-207ENST00000494748 ADGRG1Q9Y653 693 aa17.58■□□□□ 0.41
SDF4-207ENST00000494748 PAPPAQ13219 1627 aa17.58■□□□□ 0.41
SDF4-207ENST00000494748 ZFYP08048 801 aaPredicted RBP17.58■□□□□ 0.4
SDF4-207ENST00000494748 PBX1P40424 430 aa17.58■□□□□ 0.4
SDF4-207ENST00000494748 TTLL7Q6ZT98 887 aa17.58■□□□□ 0.4
SDF4-207ENST00000494748 SPATA20Q8TB22 786 aa17.58■□□□□ 0.4
SDF4-207ENST00000494748 ORAI2Q96SN7 254 aa17.58■□□□□ 0.4
SDF4-207ENST00000494748 MST1RQ04912 1400 aa17.58■□□□□ 0.4
SDF4-207ENST00000494748 GPAA1O43292 621 aa17.58■□□□□ 0.4
SDF4-207ENST00000494748 POSTNQ15063 836 aa17.58■□□□□ 0.4
SDF4-207ENST00000494748 PI16Q6UXB8 463 aa17.58■□□□□ 0.4
SDF4-207ENST00000494748 PANX2Q96RD6 677 aa17.58■□□□□ 0.4
SDF4-207ENST00000494748 FBXO2Q9UK22 296 aaPredicted RBP17.58■□□□□ 0.4
SDF4-207ENST00000494748 METAP2P50579 478 aaKnown RBP eCLIP17.57■□□□□ 0.45e-7■■□□□ 11.7
SDF4-207ENST00000494748 CHMP4BP1P59074 171 aa17.57■□□□□ 0.4
SDF4-207ENST00000494748 GPS2Q13227 327 aa17.57■□□□□ 0.4
SDF4-207ENST00000494748 WASHC4Q2M389 1173 aa17.57■□□□□ 0.4
SDF4-207ENST00000494748 TTC39AQ5SRH9 613 aa17.57■□□□□ 0.4
SDF4-207ENST00000494748 ZNF213O14771 459 aa17.57■□□□□ 0.4
SDF4-207ENST00000494748 TFRCP02786 760 aaKnown RBP17.57■□□□□ 0.4
SDF4-207ENST00000494748 ZAP70P43403 619 aa17.57■□□□□ 0.4
SDF4-207ENST00000494748 MAPK8IP2Q13387 824 aaPredicted RBP17.57■□□□□ 0.4
SDF4-207ENST00000494748 SRLQ86TD4 932 aa17.57■□□□□ 0.4
SDF4-207ENST00000494748 XAGE2Q96GT9 111 aa17.57■□□□□ 0.4
SDF4-207ENST00000494748 PDE11AQ9HCR9 933 aa17.57■□□□□ 0.4
SDF4-207ENST00000494748 MYH6P13533 1939 aa17.57■□□□□ 0.4
SDF4-207ENST00000494748 MYH13Q9UKX3 1938 aa17.57■□□□□ 0.4
SDF4-207ENST00000494748 BCL9LQ86UU0 1499 aa17.57■□□□□ 0.4
SDF4-207ENST00000494748 CYP27B1O15528 508 aa17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms