RNA–Protein interactions for RNA: ENST00000494675.5

LRIF1-203, Transcript of ligand dependent nuclear receptor interacting factor 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LRIF1, Length 1,912 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIF1-203ENST00000494675 ITPKAP23677 461 aa4.51□□□□□ -1.69
LRIF1-203ENST00000494675 PTPN12Q05209 780 aaKnown RBP4.51□□□□□ -1.69
LRIF1-203ENST00000494675 LDLRAD1Q5T700 205 aa4.51□□□□□ -1.69
LRIF1-203ENST00000494675 LOC100289279A0A1B0GTE1 492 aa4.5□□□□□ -1.69
LRIF1-203ENST00000494675 FBXO24O75426 580 aa4.5□□□□□ -1.69
LRIF1-203ENST00000494675 F13BP05160 661 aa4.5□□□□□ -1.69
LRIF1-203ENST00000494675 ZNF76P36508 570 aa4.5□□□□□ -1.69
LRIF1-203ENST00000494675 ZNF423Q2M1K9 1284 aa4.5□□□□□ -1.69
LRIF1-203ENST00000494675 FBXL18Q96ME1 805 aa4.5□□□□□ -1.69
LRIF1-203ENST00000494675 PPM1HQ9ULR3 514 aa4.5□□□□□ -1.69
LRIF1-203ENST00000494675 USP31Q70CQ4 1352 aa4.5□□□□□ -1.69
LRIF1-203ENST00000494675 FOSL1P15407 271 aa4.5□□□□□ -1.69
LRIF1-203ENST00000494675 HOXA10P31260 410 aaPredicted RBP4.5□□□□□ -1.69
LRIF1-203ENST00000494675 ST13P50502 369 aaKnown RBP4.5□□□□□ -1.69
LRIF1-203ENST00000494675 SOX4Q06945 474 aaPredicted RBP4.5□□□□□ -1.69
LRIF1-203ENST00000494675 CCDC85BQ15834 202 aaPredicted RBP4.5□□□□□ -1.69
LRIF1-203ENST00000494675 DUSP27Q5VZP5 1158 aa4.5□□□□□ -1.69
LRIF1-203ENST00000494675 TPTE2Q6XPS3 522 aa4.5□□□□□ -1.69
LRIF1-203ENST00000494675 ABI1Q8IZP0 508 aa4.5□□□□□ -1.69
LRIF1-203ENST00000494675 CEP44Q9C0F1 390 aa4.5□□□□□ -1.69
LRIF1-203ENST00000494675 ZNF576Q9H609 170 aa4.5□□□□□ -1.69
LRIF1-203ENST00000494675 METTL5Q9NRN9 209 aaKnown RBP4.5□□□□□ -1.69
LRIF1-203ENST00000494675 CYP26A1O43174 497 aa4.49□□□□□ -1.69
LRIF1-203ENST00000494675 PSPNO60542 156 aa4.49□□□□□ -1.69
LRIF1-203ENST00000494675 TIAF1O95411 115 aa4.49□□□□□ -1.69
LRIF1-203ENST00000494675 CYP11A1P05108 521 aa4.49□□□□□ -1.69
LRIF1-203ENST00000494675 MAP7Q14244 749 aa4.49□□□□□ -1.69
LRIF1-203ENST00000494675 POU4F3Q15319 338 aa4.49□□□□□ -1.69
LRIF1-203ENST00000494675 RPS26P11Q5JNZ5 115 aaPredicted RBP4.49□□□□□ -1.69
LRIF1-203ENST00000494675 C9orf131Q5VYM1 1079 aa4.49□□□□□ -1.69
LRIF1-203ENST00000494675 VSIG10LQ86VR7 867 aa4.49□□□□□ -1.69
LRIF1-203ENST00000494675 FBLIM1Q8WUP2 373 aa4.49□□□□□ -1.69
LRIF1-203ENST00000494675 RNF34Q969K3 372 aa4.49□□□□□ -1.69
LRIF1-203ENST00000494675 RAD18Q9NS91 495 aa4.49□□□□□ -1.69
LRIF1-203ENST00000494675 GPN3Q9UHW5 284 aaPredicted RBP4.49□□□□□ -1.69
LRIF1-203ENST00000494675 ZNF157P51786 506 aaPredicted RBP4.48□□□□□ -1.69
LRIF1-203ENST00000494675 FANCCQ00597 558 aa4.48□□□□□ -1.69
LRIF1-203ENST00000494675 CYP27A1Q02318 531 aa4.48□□□□□ -1.69
LRIF1-203ENST00000494675 HS2ST1Q7LGA3 356 aa4.48□□□□□ -1.69
LRIF1-203ENST00000494675 TBC1D32Q96NH3 1257 aa4.48□□□□□ -1.69
LRIF1-203ENST00000494675 IGSF5Q9NSI5 407 aa4.48□□□□□ -1.69
LRIF1-203ENST00000494675 GGT7Q9UJ14 662 aa4.48□□□□□ -1.69
LRIF1-203ENST00000494675 HDLBPQ00341 1268 aaKnown RBP4.48□□□□□ -1.69
LRIF1-203ENST00000494675 PPP2R3AQ06190 1150 aa4.48□□□□□ -1.69
LRIF1-203ENST00000494675 CDPF1Q6NVV7 123 aa4.48□□□□□ -1.69
LRIF1-203ENST00000494675 TP53INP2Q8IXH6 220 aa4.48□□□□□ -1.69
LRIF1-203ENST00000494675 NOC4LQ9BVI4 516 aaKnown RBP4.48□□□□□ -1.69
LRIF1-203ENST00000494675 TMEM39AQ9NV64 488 aa4.48□□□□□ -1.69
LRIF1-203ENST00000494675 BSDC1Q9NW68 430 aaPredicted RBP4.48□□□□□ -1.69
LRIF1-203ENST00000494675 B3GALT4O96024 378 aa4.47□□□□□ -1.69
LRIF1-203ENST00000494675 DRD2P14416 443 aa4.47□□□□□ -1.69
LRIF1-203ENST00000494675 MAOBP27338 520 aa4.47□□□□□ -1.69
LRIF1-203ENST00000494675 FAAP100Q0VG06 881 aa4.47□□□□□ -1.69
LRIF1-203ENST00000494675 SV2BQ7L1I2 683 aa4.47□□□□□ -1.69
LRIF1-203ENST00000494675 DYMQ7RTS9 669 aa4.47□□□□□ -1.69
LRIF1-203ENST00000494675 ZAR1Q86SH2 424 aa4.47□□□□□ -1.69
LRIF1-203ENST00000494675 NT5DC4Q86YG4 428 aa4.47□□□□□ -1.69
LRIF1-203ENST00000494675 C2CD4AQ8NCU7 369 aaPredicted RBP4.47□□□□□ -1.69
LRIF1-203ENST00000494675 AGBL5Q8NDL9 886 aa4.47□□□□□ -1.69
LRIF1-203ENST00000494675 ANKRD24Q8TF21 1146 aa4.47□□□□□ -1.69
LRIF1-203ENST00000494675 CORO1BQ9BR76 489 aa4.47□□□□□ -1.69
LRIF1-203ENST00000494675 PRKAG2Q9UGJ0 569 aa4.47□□□□□ -1.69
LRIF1-203ENST00000494675 B8ZZF3 427 aa4.46□□□□□ -1.69
LRIF1-203ENST00000494675 ENC1O14682 589 aa4.46□□□□□ -1.69
LRIF1-203ENST00000494675 PRNPP04156 253 aa4.46□□□□□ -1.69
LRIF1-203ENST00000494675 RLBP1P12271 317 aa4.46□□□□□ -1.69
LRIF1-203ENST00000494675 JUNBP17275 347 aaPredicted RBP4.46□□□□□ -1.69
LRIF1-203ENST00000494675 ERCC5P28715 1186 aaPredicted RBP4.46□□□□□ -1.69
LRIF1-203ENST00000494675 AP3B2Q13367 1082 aa4.46□□□□□ -1.69
LRIF1-203ENST00000494675 EZH1Q92800 747 aaPredicted RBP4.46□□□□□ -1.69
LRIF1-203ENST00000494675 NECAB3Q96P71 396 aaPredicted RBP4.46□□□□□ -1.69
LRIF1-203ENST00000494675 CCDC39Q9UFE4 941 aa4.46□□□□□ -1.69
LRIF1-203ENST00000494675 DLGAP3O95886 979 aa4.46□□□□□ -1.7
LRIF1-203ENST00000494675 CELA3AP09093 270 aa4.46□□□□□ -1.7
LRIF1-203ENST00000494675 ADH5P11766 374 aa4.46□□□□□ -1.7
LRIF1-203ENST00000494675 MAP3K11Q16584 847 aa4.46□□□□□ -1.7
LRIF1-203ENST00000494675 CBLL1Q75N03 491 aa4.46□□□□□ -1.7
LRIF1-203ENST00000494675 METTL16Q86W50 562 aaKnown RBP4.46□□□□□ -1.7
LRIF1-203ENST00000494675 FLCNQ8NFG4 579 aa4.46□□□□□ -1.7
LRIF1-203ENST00000494675 NRSN2Q9GZP1 204 aa4.46□□□□□ -1.7
LRIF1-203ENST00000494675 SAMM50Q9Y512 469 aa4.46□□□□□ -1.7
LRIF1-203ENST00000494675 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP4.45□□□□□ -1.7
LRIF1-203ENST00000494675 ZNF865P0CJ78 1059 aaPredicted RBP4.45□□□□□ -1.7
LRIF1-203ENST00000494675 RAB6AP20340 208 aa4.45□□□□□ -1.7
LRIF1-203ENST00000494675 LMNB1P20700 586 aa4.45□□□□□ -1.7
LRIF1-203ENST00000494675 BUD31P41223 144 aaPredicted RBP4.45□□□□□ -1.7
LRIF1-203ENST00000494675 HNRNPUQ00839 825 aaKnown RBP eCLIP4.45□□□□□ -1.7
LRIF1-203ENST00000494675 PWP1Q13610 501 aa4.45□□□□□ -1.7
LRIF1-203ENST00000494675 MSMPQ1L6U9 139 aa4.45□□□□□ -1.7
LRIF1-203ENST00000494675 AKAP4Q5JQC9 854 aa4.45□□□□□ -1.7
LRIF1-203ENST00000494675 USP48Q86UV5 1035 aa4.45□□□□□ -1.7
LRIF1-203ENST00000494675 RELL1Q8IUW5 271 aa4.45□□□□□ -1.7
LRIF1-203ENST00000494675 TRIM56Q9BRZ2 755 aaKnown RBP4.45□□□□□ -1.7
LRIF1-203ENST00000494675 DBX1A6NMT0 343 aa4.44□□□□□ -1.7
LRIF1-203ENST00000494675 F6X3S4 739 aa4.44□□□□□ -1.7
LRIF1-203ENST00000494675 PAGE1O75459 146 aa4.44□□□□□ -1.7
LRIF1-203ENST00000494675 CTSBP07858 339 aa4.44□□□□□ -1.7
LRIF1-203ENST00000494675 NFICP08651 508 aa4.44□□□□□ -1.7
LRIF1-203ENST00000494675 ITGB5P18084 799 aa4.44□□□□□ -1.7
LRIF1-203ENST00000494675 GBP2P32456 591 aaPredicted RBP4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms