RNA–Protein interactions for RNA: ENST00000494672.1

CCDC66-222, Transcript of coiled-coil domain containing 66, humanhuman

TSL 4

Gene CCDC66, Length 577 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-222ENST00000494672 KRTAP9-2Q9BYQ4 174 aa8.12□□□□□ -1.11
CCDC66-222ENST00000494672 ADGRE2Q9UHX3 823 aa8.12□□□□□ -1.11
CCDC66-222ENST00000494672 WWC3Q9ULE0 1092 aa8.12□□□□□ -1.11
CCDC66-222ENST00000494672 SPG7Q9UQ90 795 aa8.12□□□□□ -1.11
CCDC66-222ENST00000494672 FAM87AP0C7U9 286 aa8.11□□□□□ -1.11
CCDC66-222ENST00000494672 ERVK-24P63145 666 aa8.11□□□□□ -1.11
CCDC66-222ENST00000494672 CDK5R2Q13319 367 aa8.11□□□□□ -1.11
CCDC66-222ENST00000494672 ZC3H12AQ5D1E8 599 aaKnown RBP8.11□□□□□ -1.11
CCDC66-222ENST00000494672 ABI1Q8IZP0 508 aa8.11□□□□□ -1.11
CCDC66-222ENST00000494672 GPBAR1Q8TDU6 330 aa8.11□□□□□ -1.11
CCDC66-222ENST00000494672 BMP6P22004 513 aa8.1□□□□□ -1.11
CCDC66-222ENST00000494672 LRRC14Q15048 493 aa8.1□□□□□ -1.11
CCDC66-222ENST00000494672 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.1□□□□□ -1.11
CCDC66-222ENST00000494672 RNF214Q8ND24 703 aa8.1□□□□□ -1.11
CCDC66-222ENST00000494672 SETDB2Q96T68 719 aa8.1□□□□□ -1.11
CCDC66-222ENST00000494672 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.09□□□□□ -1.11
CCDC66-222ENST00000494672 ENC1O14682 589 aa8.09□□□□□ -1.11
CCDC66-222ENST00000494672 TXKP42681 527 aa8.09□□□□□ -1.11
CCDC66-222ENST00000494672 STK11IPQ8N1F8 1099 aa8.09□□□□□ -1.11
CCDC66-222ENST00000494672 AGBL5Q8NDL9 886 aa8.09□□□□□ -1.11
CCDC66-222ENST00000494672 FLCNQ8NFG4 579 aa8.09□□□□□ -1.11
CCDC66-222ENST00000494672 ANKRD24Q8TF21 1146 aa8.09□□□□□ -1.11
CCDC66-222ENST00000494672 FRMD6Q96NE9 622 aa8.09□□□□□ -1.11
CCDC66-222ENST00000494672 TRIM37O94972 964 aa8.08□□□□□ -1.12
CCDC66-222ENST00000494672 SCARA3Q6AZY7 606 aa8.08□□□□□ -1.12
CCDC66-222ENST00000494672 ISL2Q96A47 359 aa8.08□□□□□ -1.12
CCDC66-222ENST00000494672 C12orf49Q9H741 205 aa8.08□□□□□ -1.12
CCDC66-222ENST00000494672 PICK1Q9NRD5 415 aa8.08□□□□□ -1.12
CCDC66-222ENST00000494672 CACNA2D2Q9NY47 1150 aa8.08□□□□□ -1.12
CCDC66-222ENST00000494672 FAM8A1Q9UBU6 413 aa8.08□□□□□ -1.12
CCDC66-222ENST00000494672 SLC5A6Q9Y289 635 aa8.08□□□□□ -1.12
CCDC66-222ENST00000494672 KRTAP9-6A0A140TA67 174 aa8.07□□□□□ -1.12
CCDC66-222ENST00000494672 FBXO24O75426 580 aa8.07□□□□□ -1.12
CCDC66-222ENST00000494672 LDHBP07195 334 aaKnown RBP8.07□□□□□ -1.12
CCDC66-222ENST00000494672 NEFMP07197 916 aa8.07□□□□□ -1.12
CCDC66-222ENST00000494672 LLGL2Q6P1M3 1020 aa8.07□□□□□ -1.12
CCDC66-222ENST00000494672 MPRIPQ6WCQ1 1025 aa8.07□□□□□ -1.12
CCDC66-222ENST00000494672 ARHGAP27Q6ZUM4 889 aa8.07□□□□□ -1.12
CCDC66-222ENST00000494672 GRIN3AQ8TCU5 1115 aa8.07□□□□□ -1.12
CCDC66-222ENST00000494672 NETO1Q8TDF5 533 aa8.07□□□□□ -1.12
CCDC66-222ENST00000494672 MISP3Q96FF7 219 aa8.07□□□□□ -1.12
CCDC66-222ENST00000494672 CYP8B1Q9UNU6 501 aa8.07□□□□□ -1.12
CCDC66-222ENST00000494672 PAGE1O75459 146 aa8.06□□□□□ -1.12
CCDC66-222ENST00000494672 P4HBP07237 508 aaKnown RBP8.06□□□□□ -1.12
CCDC66-222ENST00000494672 FGD1P98174 961 aa8.06□□□□□ -1.12
CCDC66-222ENST00000494672 NFXL1Q6ZNB6 911 aa8.06□□□□□ -1.12
CCDC66-222ENST00000494672 FMNL2Q96PY5 1086 aa8.06□□□□□ -1.12
CCDC66-222ENST00000494672 DUSP23Q9BVJ7 150 aa8.06□□□□□ -1.12
CCDC66-222ENST00000494672 PAK6Q9NQU5 681 aaPredicted RBP8.06□□□□□ -1.12
CCDC66-222ENST00000494672 RNF114Q9Y508 228 aa8.06□□□□□ -1.12
CCDC66-222ENST00000494672 USP17L7P0C7H9 530 aa8.05□□□□□ -1.12
CCDC66-222ENST00000494672 PPM1JQ5JR12 505 aa8.05□□□□□ -1.12
CCDC66-222ENST00000494672 BCL7CQ8WUZ0 217 aaPredicted RBP8.05□□□□□ -1.12
CCDC66-222ENST00000494672 CSADQ9Y600 493 aa8.05□□□□□ -1.12
CCDC66-222ENST00000494672 DCDC2CA8MYV0 355 aa8.04□□□□□ -1.12
CCDC66-222ENST00000494672 LEFTY1O75610 366 aa8.04□□□□□ -1.12
CCDC66-222ENST00000494672 SV2BQ7L1I2 683 aa8.04□□□□□ -1.12
CCDC66-222ENST00000494672 CDC37L1Q7L3B6 337 aa8.04□□□□□ -1.12
CCDC66-222ENST00000494672 C12orf40Q86WS4 652 aa8.04□□□□□ -1.12
CCDC66-222ENST00000494672 MKNK2Q9HBH9 465 aa8.04□□□□□ -1.12
CCDC66-222ENST00000494672 PCDHA4Q9UN74 947 aa8.04□□□□□ -1.12
CCDC66-222ENST00000494672 FANCGO15287 622 aa8.03□□□□□ -1.12
CCDC66-222ENST00000494672 PCNX4Q63HM2 1172 aa8.03□□□□□ -1.12
CCDC66-222ENST00000494672 CBLL1Q75N03 491 aa8.03□□□□□ -1.12
CCDC66-222ENST00000494672 PLD6Q8N2A8 252 aaKnown RBP8.03□□□□□ -1.12
CCDC66-222ENST00000494672 TOP6BLQ8N6T0 577 aa8.03□□□□□ -1.12
CCDC66-222ENST00000494672 FAM181AQ8N9Y4 354 aa8.03□□□□□ -1.12
CCDC66-222ENST00000494672 KCT2Q8NC54 265 aa8.03□□□□□ -1.12
CCDC66-222ENST00000494672 ELMO3Q96BJ8 720 aa8.03□□□□□ -1.12
CCDC66-222ENST00000494672 VAV3Q9UKW4 847 aa8.03□□□□□ -1.12
CCDC66-222ENST00000494672 TTF2Q9UNY4 1162 aaKnown RBP8.03□□□□□ -1.12
CCDC66-222ENST00000494672 EIF4BP23588 611 aaKnown RBP8.02□□□□□ -1.13
CCDC66-222ENST00000494672 RING1Q06587 406 aa8.02□□□□□ -1.13
CCDC66-222ENST00000494672 COL19A1Q14993 1142 aa8.02□□□□□ -1.13
CCDC66-222ENST00000494672 IFI16Q16666 785 aaKnown RBP8.02□□□□□ -1.13
CCDC66-222ENST00000494672 GOLGA2P5Q9HBQ8 144 aa8.02□□□□□ -1.13
CCDC66-222ENST00000494672 TMEM265A0A087WTH1 108 aa8.01□□□□□ -1.13
CCDC66-222ENST00000494672 PRPF40AO75400 957 aaKnown RBP8.01□□□□□ -1.13
CCDC66-222ENST00000494672 CELA3AP09093 270 aa8.01□□□□□ -1.13
CCDC66-222ENST00000494672 GNA15P30679 374 aa8.01□□□□□ -1.13
CCDC66-222ENST00000494672 BNIP3Q12983 259 aa8.01□□□□□ -1.13
CCDC66-222ENST00000494672 PLCL1Q15111 1095 aa8.01□□□□□ -1.13
CCDC66-222ENST00000494672 ZBTB37Q5TC79 503 aa8.01□□□□□ -1.13
CCDC66-222ENST00000494672 SPRED2Q7Z698 418 aa8.01□□□□□ -1.13
CCDC66-222ENST00000494672 ASIC4Q96FT7 647 aa8.01□□□□□ -1.13
CCDC66-222ENST00000494672 GTF2IRD1Q9UHL9 959 aa8.01□□□□□ -1.13
CCDC66-222ENST00000494672 JUNBP17275 347 aaPredicted RBP8□□□□□ -1.13
CCDC66-222ENST00000494672 OXCT1P55809 520 aa8□□□□□ -1.13
CCDC66-222ENST00000494672 PRKCQQ04759 706 aa8□□□□□ -1.13
CCDC66-222ENST00000494672 RASIP1Q5U651 963 aa8□□□□□ -1.13
CCDC66-222ENST00000494672 ZNF507Q8TCN5 953 aa8□□□□□ -1.13
CCDC66-222ENST00000494672 KRTAP4-12Q9BQ66 201 aa8□□□□□ -1.13
CCDC66-222ENST00000494672 PRDM10Q9NQV6 1147 aa8□□□□□ -1.13
CCDC66-222ENST00000494672 AK5Q9Y6K8 562 aa8□□□□□ -1.13
CCDC66-222ENST00000494672 CEACAM5P06731 702 aa7.99□□□□□ -1.13
CCDC66-222ENST00000494672 NTF4P34130 210 aa7.99□□□□□ -1.13
CCDC66-222ENST00000494672 EAPPQ56P03 285 aaPredicted RBP7.99□□□□□ -1.13
CCDC66-222ENST00000494672 ZNF574Q6ZN55 896 aaPredicted RBP7.99□□□□□ -1.13
CCDC66-222ENST00000494672 HDXQ7Z353 690 aa7.99□□□□□ -1.13
CCDC66-222ENST00000494672 AEBP1Q8IUX7 1158 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms