RNA–Protein interactions for RNA: ENST00000494613.5

LIMS2-216, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2

Gene LIMS2, Length 1,137 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-216ENST00000494613 ERC1Q8IUD2 1116 aa19.13■□□□□ 0.65
LIMS2-216ENST00000494613 ZSCAN29Q8IWY8 852 aaPredicted RBP19.13■□□□□ 0.65
LIMS2-216ENST00000494613 BRI3BPQ8WY22 251 aa19.13■□□□□ 0.65
LIMS2-216ENST00000494613 TLR7Q9NYK1 1049 aaKnown RBP19.13■□□□□ 0.65
LIMS2-216ENST00000494613 MYH2Q9UKX2 1941 aa19.12■□□□□ 0.65
LIMS2-216ENST00000494613 CCL15-CCL14A0A0B4J2E2 113 aa19.12■□□□□ 0.65
LIMS2-216ENST00000494613 IRF6O14896 467 aa19.12■□□□□ 0.65
LIMS2-216ENST00000494613 PICALMQ13492 652 aa19.12■□□□□ 0.65
LIMS2-216ENST00000494613 PDE3AQ14432 1141 aa19.12■□□□□ 0.65
LIMS2-216ENST00000494613 CCL15Q16663 113 aa19.12■□□□□ 0.65
LIMS2-216ENST00000494613 CHMP4BQ9H444 224 aaKnown RBP19.12■□□□□ 0.65
LIMS2-216ENST00000494613 PHF20L1A8MW92 1017 aa19.11■□□□□ 0.65
LIMS2-216ENST00000494613 MAP4K4O95819 1239 aaPredicted RBP19.11■□□□□ 0.65
LIMS2-216ENST00000494613 PPATQ06203 517 aa19.11■□□□□ 0.65
LIMS2-216ENST00000494613 CRHR2Q13324 411 aa19.11■□□□□ 0.65
LIMS2-216ENST00000494613 PKN2Q16513 984 aaKnown RBP19.11■□□□□ 0.65
LIMS2-216ENST00000494613 RHPN1Q8TCX5 695 aa19.11■□□□□ 0.65
LIMS2-216ENST00000494613 NPM3O75607 178 aaKnown RBP19.1■□□□□ 0.65
LIMS2-216ENST00000494613 SLURP2P0DP57 97 aa19.1■□□□□ 0.65
LIMS2-216ENST00000494613 CETPP11597 493 aa19.1■□□□□ 0.65
LIMS2-216ENST00000494613 PPIL2Q13356 520 aa19.1■□□□□ 0.65
LIMS2-216ENST00000494613 NAA16Q6N069 864 aaPredicted RBP19.1■□□□□ 0.65
LIMS2-216ENST00000494613 AACSQ86V21 672 aa19.1■□□□□ 0.65
LIMS2-216ENST00000494613 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.1■□□□□ 0.65
LIMS2-216ENST00000494613 IL1RAPL2Q9NP60 686 aa19.1■□□□□ 0.65
LIMS2-216ENST00000494613 HMMRO75330 724 aa19.09■□□□□ 0.65
LIMS2-216ENST00000494613 SNAPC2Q13487 334 aa19.09■□□□□ 0.65
LIMS2-216ENST00000494613 FAM43AQ8N2R8 423 aa19.09■□□□□ 0.65
LIMS2-216ENST00000494613 PIH1D3Q9NQM4 214 aaKnown RBP19.09■□□□□ 0.65
LIMS2-216ENST00000494613 AK9Q5TCS8 1911 aa19.09■□□□□ 0.65
LIMS2-216ENST00000494613 APBB1O00213 710 aa19.08■□□□□ 0.64
LIMS2-216ENST00000494613 BAG3O95817 575 aa19.08■□□□□ 0.64
LIMS2-216ENST00000494613 PPP4CP60510 307 aa19.08■□□□□ 0.64
LIMS2-216ENST00000494613 NOL9Q5SY16 702 aaKnown RBP19.08■□□□□ 0.64
LIMS2-216ENST00000494613 SH3RF3Q8TEJ3 882 aaPredicted RBP19.08■□□□□ 0.64
LIMS2-216ENST00000494613 BTBD19C9JJ37 291 aa19.07■□□□□ 0.64
LIMS2-216ENST00000494613 IGSF3O75054 1194 aa19.07■□□□□ 0.64
LIMS2-216ENST00000494613 RAB11FIP3O75154 756 aa19.07■□□□□ 0.64
LIMS2-216ENST00000494613 TEX11Q8IYF3 940 aa19.07■□□□□ 0.64
LIMS2-216ENST00000494613 KIF1BPQ96EK5 621 aa19.07■□□□□ 0.64
LIMS2-216ENST00000494613 NOL10Q9BSC4 688 aaKnown RBP19.07■□□□□ 0.64
LIMS2-216ENST00000494613 ZFYVE28Q9HCC9 887 aa19.07■□□□□ 0.64
LIMS2-216ENST00000494613 AATFQ9NY61 560 aaKnown RBP eCLIP19.07■□□□□ 0.64
LIMS2-216ENST00000494613 NDUFB9Q9Y6M9 179 aa19.07■□□□□ 0.64
LIMS2-216ENST00000494613 RFX7Q2KHR2 1363 aa19.06■□□□□ 0.64
LIMS2-216ENST00000494613 ATRNL1Q5VV63 1379 aa19.06■□□□□ 0.64
LIMS2-216ENST00000494613 TBC1D12O60347 775 aa19.06■□□□□ 0.64
LIMS2-216ENST00000494613 CTNND1O60716 968 aaKnown RBP19.06■□□□□ 0.64
LIMS2-216ENST00000494613 RGS19P49795 217 aa19.06■□□□□ 0.64
LIMS2-216ENST00000494613 SP3Q02447 781 aa19.06■□□□□ 0.64
LIMS2-216ENST00000494613 TAF1CQ15572 869 aaPredicted RBP19.06■□□□□ 0.64
LIMS2-216ENST00000494613 ADGRA1Q86SQ6 560 aa19.06■□□□□ 0.64
LIMS2-216ENST00000494613 CLASRPQ8N2M8 674 aaKnown RBP19.06■□□□□ 0.64
LIMS2-216ENST00000494613 BCL11AQ9H165 835 aa19.06■□□□□ 0.64
LIMS2-216ENST00000494613 ANTXR1Q9H6X2 564 aa19.06■□□□□ 0.64
LIMS2-216ENST00000494613 KCNH4Q9UQ05 1017 aa19.06■□□□□ 0.64
LIMS2-216ENST00000494613 ZHX2Q9Y6X8 837 aa19.06■□□□□ 0.64
LIMS2-216ENST00000494613 OTOFQ9HC10 1997 aa19.06■□□□□ 0.64
LIMS2-216ENST00000494613 PLCG2P16885 1265 aa19.05■□□□□ 0.64
LIMS2-216ENST00000494613 PTPRAP18433 802 aa19.05■□□□□ 0.64
LIMS2-216ENST00000494613 CYP7A1P22680 504 aa19.05■□□□□ 0.64
LIMS2-216ENST00000494613 OSBPL5Q9H0X9 879 aaPredicted RBP19.05■□□□□ 0.64
LIMS2-216ENST00000494613 XPO5Q9HAV4 1204 aaKnown RBP eCLIP19.05■□□□□ 0.64
LIMS2-216ENST00000494613 HPS5Q9UPZ3 1129 aa19.05■□□□□ 0.64
LIMS2-216ENST00000494613 CXCL11O14625 94 aa19.04■□□□□ 0.64
LIMS2-216ENST00000494613 IDH1O75874 414 aaKnown RBP19.04■□□□□ 0.64
LIMS2-216ENST00000494613 FBXO46Q6PJ61 603 aaPredicted RBP19.04■□□□□ 0.64
LIMS2-216ENST00000494613 SCYL3Q8IZE3 742 aa19.04■□□□□ 0.64
LIMS2-216ENST00000494613 CD99L2Q8TCZ2 262 aa19.04■□□□□ 0.64
LIMS2-216ENST00000494613 TGFBRAP1Q8WUH2 860 aa19.04■□□□□ 0.64
LIMS2-216ENST00000494613 ERO1AQ96HE7 468 aa19.04■□□□□ 0.64
LIMS2-216ENST00000494613 ZCCHC17Q9NP64 241 aaKnown RBP19.04■□□□□ 0.64
LIMS2-216ENST00000494613 PICK1Q9NRD5 415 aa19.04■□□□□ 0.64
LIMS2-216ENST00000494613 TRIM17Q9Y577 477 aa19.04■□□□□ 0.64
LIMS2-216ENST00000494613 IFIT2P09913 472 aaKnown RBP19.03■□□□□ 0.64
LIMS2-216ENST00000494613 DYNLL1P63167 89 aaKnown RBP19.03■□□□□ 0.64
LIMS2-216ENST00000494613 MOGSQ13724 837 aa19.03■□□□□ 0.64
LIMS2-216ENST00000494613 OTOP1Q7RTM1 612 aa19.03■□□□□ 0.64
LIMS2-216ENST00000494613 AFG3L2Q9Y4W6 797 aa19.03■□□□□ 0.64
LIMS2-216ENST00000494613 FAM196BA6NMK8 535 aa19.02■□□□□ 0.64
LIMS2-216ENST00000494613 TLR2O60603 784 aa19.02■□□□□ 0.64
LIMS2-216ENST00000494613 CAP1Q01518 475 aa19.02■□□□□ 0.64
LIMS2-216ENST00000494613 ANKRD23Q86SG2 305 aa19.02■□□□□ 0.64
LIMS2-216ENST00000494613 MAGEB6Q8N7X4 407 aa19.02■□□□□ 0.64
LIMS2-216ENST00000494613 PI4KBQ9UBF8 816 aa19.02■□□□□ 0.64
LIMS2-216ENST00000494613 PDHXO00330 501 aa19.01■□□□□ 0.63
LIMS2-216ENST00000494613 MAP3K12Q12852 859 aa19.01■□□□□ 0.63
LIMS2-216ENST00000494613 MAPKAPK5Q8IW41 473 aa19.01■□□□□ 0.63
LIMS2-216ENST00000494613 DHX36Q9H2U1 1008 aaKnown RBP19.01■□□□□ 0.63
LIMS2-216ENST00000494613 EFCC1Q9HA90 598 aa19.01■□□□□ 0.63
LIMS2-216ENST00000494613 RRP1BQ14684 758 aaKnown RBP19■□□□□ 0.63
LIMS2-216ENST00000494613 GPAT2Q6NUI2 795 aa19■□□□□ 0.63
LIMS2-216ENST00000494613 FOXP4Q8IVH2 680 aaPredicted RBP19■□□□□ 0.63
LIMS2-216ENST00000494613 MIGA1Q8NAN2 632 aa19■□□□□ 0.63
LIMS2-216ENST00000494613 PALD1Q9ULE6 856 aa19■□□□□ 0.63
LIMS2-216ENST00000494613 LAMB1P07942 1786 aa19■□□□□ 0.63
LIMS2-216ENST00000494613 TTF1Q15361 905 aaPredicted RBP18.99■□□□□ 0.63
LIMS2-216ENST00000494613 FASTKD5Q7L8L6 764 aaKnown RBP18.99■□□□□ 0.63
LIMS2-216ENST00000494613 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.99■□□□□ 0.63
LIMS2-216ENST00000494613 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.99■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms