RNA–Protein interactions for RNA: ENST00000494069.1

LRCH3-219, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 5

Gene LRCH3, Length 783 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-219ENST00000494069 TLR7Q9NYK1 1049 aaKnown RBP10.52□□□□□ -0.73
LRCH3-219ENST00000494069 NOP58Q9Y2X3 529 aaKnown RBP10.52□□□□□ -0.73
LRCH3-219ENST00000494069 RPAP1Q9BWH6 1393 aaPredicted RBP10.52□□□□□ -0.73
LRCH3-219ENST00000494069 MYH2Q9UKX2 1941 aa10.51□□□□□ -0.73
LRCH3-219ENST00000494069 GPR75-ASB3A0A0A6YYF3 556 aa10.51□□□□□ -0.73
LRCH3-219ENST00000494069 CCL15-CCL14A0A0B4J2E2 113 aa10.51□□□□□ -0.73
LRCH3-219ENST00000494069 DDTLA6NHG4 134 aaPredicted RBP10.51□□□□□ -0.73
LRCH3-219ENST00000494069 IRF6O14896 467 aa10.51□□□□□ -0.73
LRCH3-219ENST00000494069 SOX10P56693 466 aa10.51□□□□□ -0.73
LRCH3-219ENST00000494069 RHBDL3P58872 404 aa10.51□□□□□ -0.73
LRCH3-219ENST00000494069 PICALMQ13492 652 aa10.51□□□□□ -0.73
LRCH3-219ENST00000494069 CCL15Q16663 113 aa10.51□□□□□ -0.73
LRCH3-219ENST00000494069 NOM1Q5C9Z4 860 aaKnown RBP10.51□□□□□ -0.73
LRCH3-219ENST00000494069 DCAF15Q66K64 600 aa10.51□□□□□ -0.73
LRCH3-219ENST00000494069 SPTY2D1Q68D10 685 aaPredicted RBP10.51□□□□□ -0.73
LRCH3-219ENST00000494069 ERO1BQ86YB8 467 aa10.51□□□□□ -0.73
LRCH3-219ENST00000494069 FAM43AQ8N2R8 423 aa10.51□□□□□ -0.73
LRCH3-219ENST00000494069 NSUN4Q96CB9 384 aaKnown RBP10.51□□□□□ -0.73
LRCH3-219ENST00000494069 EAF2Q96CJ1 260 aaPredicted RBP10.51□□□□□ -0.73
LRCH3-219ENST00000494069 IDI2Q9BXS1 227 aa10.51□□□□□ -0.73
LRCH3-219ENST00000494069 GPR108Q9NPR9 543 aa10.51□□□□□ -0.73
LRCH3-219ENST00000494069 RAI14Q9P0K7 980 aa10.51□□□□□ -0.73
LRCH3-219ENST00000494069 ZNF112Q9UJU3 913 aa10.51□□□□□ -0.73
LRCH3-219ENST00000494069 HPS5Q9UPZ3 1129 aa10.51□□□□□ -0.73
LRCH3-219ENST00000494069 EXOC6BQ9Y2D4 811 aa10.51□□□□□ -0.73
LRCH3-219ENST00000494069 COG6Q9Y2V7 657 aa10.51□□□□□ -0.73
LRCH3-219ENST00000494069 MROH7-TTC4A0A0A0MT08 1334 aa10.51□□□□□ -0.73
LRCH3-219ENST00000494069 RFX7Q2KHR2 1363 aa10.51□□□□□ -0.73
LRCH3-219ENST00000494069 ATRNL1Q5VV63 1379 aa10.51□□□□□ -0.73
LRCH3-219ENST00000494069 UQCRFS1P1P0C7P4 283 aa10.5□□□□□ -0.73
LRCH3-219ENST00000494069 GTF2A2P52657 109 aa10.5□□□□□ -0.73
LRCH3-219ENST00000494069 TTC39AQ5SRH9 613 aa10.5□□□□□ -0.73
LRCH3-219ENST00000494069 ZSCAN29Q8IWY8 852 aaPredicted RBP10.5□□□□□ -0.73
LRCH3-219ENST00000494069 CD99L2Q8TCZ2 262 aa10.5□□□□□ -0.73
LRCH3-219ENST00000494069 DBNLQ9UJU6 430 aaKnown RBP10.5□□□□□ -0.73
LRCH3-219ENST00000494069 AK9Q5TCS8 1911 aa10.49□□□□□ -0.73
LRCH3-219ENST00000494069 FAM196BA6NMK8 535 aa10.49□□□□□ -0.73
LRCH3-219ENST00000494069 PHF20L1A8MW92 1017 aa10.49□□□□□ -0.73
LRCH3-219ENST00000494069 BTBD19C9JJ37 291 aa10.49□□□□□ -0.73
LRCH3-219ENST00000494069 ENTPD3O75355 529 aa10.49□□□□□ -0.73
LRCH3-219ENST00000494069 CYP2E1P05181 493 aaPredicted RBP10.49□□□□□ -0.73
LRCH3-219ENST00000494069 ZAP70P43403 619 aa10.49□□□□□ -0.73
LRCH3-219ENST00000494069 RGS19P49795 217 aa10.49□□□□□ -0.73
LRCH3-219ENST00000494069 PPIL2Q13356 520 aa10.49□□□□□ -0.73
LRCH3-219ENST00000494069 C20orf194Q5TEA3 1177 aa10.49□□□□□ -0.73
LRCH3-219ENST00000494069 OTUD7BQ6GQQ9 843 aa10.49□□□□□ -0.73
LRCH3-219ENST00000494069 OTOP1Q7RTM1 612 aa10.49□□□□□ -0.73
LRCH3-219ENST00000494069 SLF2Q8IX21 1173 aa10.49□□□□□ -0.73
LRCH3-219ENST00000494069 SIRT2Q8IXJ6 389 aa10.49□□□□□ -0.73
LRCH3-219ENST00000494069 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.49□□□□□ -0.73
LRCH3-219ENST00000494069 HOOK2Q96ED9 719 aa10.49□□□□□ -0.73
LRCH3-219ENST00000494069 PIH1D3Q9NQM4 214 aaKnown RBP10.49□□□□□ -0.73
LRCH3-219ENST00000494069 LRP2BPQ9P2M1 347 aa10.49□□□□□ -0.73
LRCH3-219ENST00000494069 FRMD4AQ9P2Q2 1039 aaPredicted RBP10.49□□□□□ -0.73
LRCH3-219ENST00000494069 RCAN3Q9UKA8 241 aa10.49□□□□□ -0.73
LRCH3-219ENST00000494069 TRIM17Q9Y577 477 aa10.49□□□□□ -0.73
LRCH3-219ENST00000494069 NDUFB9Q9Y6M9 179 aa10.49□□□□□ -0.73
LRCH3-219ENST00000494069 LAMB1P07942 1786 aa10.49□□□□□ -0.73
LRCH3-219ENST00000494069 PPATQ06203 517 aa10.48□□□□□ -0.73
LRCH3-219ENST00000494069 SNAPC2Q13487 334 aa10.48□□□□□ -0.73
LRCH3-219ENST00000494069 TAF1CQ15572 869 aaPredicted RBP10.48□□□□□ -0.73
LRCH3-219ENST00000494069 PKN2Q16513 984 aaKnown RBP10.48□□□□□ -0.73
LRCH3-219ENST00000494069 CCDC158Q5M9N0 1113 aa10.48□□□□□ -0.73
LRCH3-219ENST00000494069 ADGRA1Q86SQ6 560 aa10.48□□□□□ -0.73
LRCH3-219ENST00000494069 CCDC84Q86UT8 332 aaPredicted RBP10.48□□□□□ -0.73
LRCH3-219ENST00000494069 SH3RF3Q8TEJ3 882 aaPredicted RBP10.48□□□□□ -0.73
LRCH3-219ENST00000494069 IL1RAPL2Q9NP60 686 aa10.48□□□□□ -0.73
LRCH3-219ENST00000494069 HTTP42858 3142 aa10.47□□□□□ -0.73
LRCH3-219ENST00000494069 APBB1O00213 710 aa10.47□□□□□ -0.73
LRCH3-219ENST00000494069 ECM2O94769 699 aaPredicted RBP10.47□□□□□ -0.73
LRCH3-219ENST00000494069 LDHCP07864 332 aa10.47□□□□□ -0.73
LRCH3-219ENST00000494069 CETPP11597 493 aa10.47□□□□□ -0.73
LRCH3-219ENST00000494069 GSTO1P78417 241 aa10.47□□□□□ -0.73
LRCH3-219ENST00000494069 SP3Q02447 781 aa10.47□□□□□ -0.73
LRCH3-219ENST00000494069 MAP3K10Q02779 954 aa10.47□□□□□ -0.73
LRCH3-219ENST00000494069 MOGSQ13724 837 aa10.47□□□□□ -0.73
LRCH3-219ENST00000494069 NOL9Q5SY16 702 aaKnown RBP10.47□□□□□ -0.73
LRCH3-219ENST00000494069 NAA16Q6N069 864 aaPredicted RBP10.47□□□□□ -0.73
LRCH3-219ENST00000494069 FBXO46Q6PJ61 603 aaPredicted RBP10.47□□□□□ -0.73
LRCH3-219ENST00000494069 AACSQ86V21 672 aa10.47□□□□□ -0.73
LRCH3-219ENST00000494069 BCL11AQ9H165 835 aa10.47□□□□□ -0.73
LRCH3-219ENST00000494069 ANTXR1Q9H6X2 564 aa10.47□□□□□ -0.73
LRCH3-219ENST00000494069 ZFYVE28Q9HCC9 887 aa10.47□□□□□ -0.73
LRCH3-219ENST00000494069 ZBTB40Q9NUA8 1239 aa10.47□□□□□ -0.73
LRCH3-219ENST00000494069 GABBR2O75899 941 aa10.46□□□□□ -0.73
LRCH3-219ENST00000494069 MLLT1Q03111 559 aaPredicted RBP10.46□□□□□ -0.73
LRCH3-219ENST00000494069 RRP1BQ14684 758 aaKnown RBP10.46□□□□□ -0.73
LRCH3-219ENST00000494069 TEX11Q8IYF3 940 aa10.46□□□□□ -0.73
LRCH3-219ENST00000494069 RHPN1Q8TCX5 695 aa10.46□□□□□ -0.73
LRCH3-219ENST00000494069 ERO1AQ96HE7 468 aa10.46□□□□□ -0.73
LRCH3-219ENST00000494069 ZNF512BQ96KM6 892 aaPredicted RBP10.46□□□□□ -0.73
LRCH3-219ENST00000494069 ARHGAP39Q9C0H5 1083 aa10.46□□□□□ -0.73
LRCH3-219ENST00000494069 OSBPL5Q9H0X9 879 aaPredicted RBP10.46□□□□□ -0.73
LRCH3-219ENST00000494069 AATFQ9NY61 560 aaKnown RBP eCLIP10.46□□□□□ -0.73
LRCH3-219ENST00000494069 KCNH4Q9UQ05 1017 aa10.46□□□□□ -0.73
LRCH3-219ENST00000494069 MYO5AQ9Y4I1 1855 aaKnown RBP10.45□□□□□ -0.74
LRCH3-219ENST00000494069 TLR2O60603 784 aa10.45□□□□□ -0.74
LRCH3-219ENST00000494069 PTPRAP18433 802 aa10.45□□□□□ -0.74
LRCH3-219ENST00000494069 DYNLL1P63167 89 aaKnown RBP10.45□□□□□ -0.74
LRCH3-219ENST00000494069 GPAT2Q6NUI2 795 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms