RNA–Protein interactions for RNA: ENST00000494047.5

RFC4-214, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 1,393 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-214ENST00000494047 BMP15O95972 392 aa13.27□□□□□ -0.29
RFC4-214ENST00000494047 FGAP02671 866 aa13.27□□□□□ -0.29
RFC4-214ENST00000494047 SFPQP23246 707 aaKnown RBP eCLIP13.27□□□□□ -0.29
RFC4-214ENST00000494047 METAP2P50579 478 aaKnown RBP eCLIP13.27□□□□□ -0.29
RFC4-214ENST00000494047 GNL2Q13823 731 aaKnown RBP13.27□□□□□ -0.29
RFC4-214ENST00000494047 SLC39A14Q15043 492 aa13.27□□□□□ -0.29
RFC4-214ENST00000494047 METTL24Q5JXM2 366 aa13.27□□□□□ -0.29
RFC4-214ENST00000494047 CEP135Q66GS9 1140 aa13.27□□□□□ -0.29
RFC4-214ENST00000494047 KANK3Q6NY19 840 aa13.27□□□□□ -0.29
RFC4-214ENST00000494047 OSBP2Q969R2 916 aa13.27□□□□□ -0.29
RFC4-214ENST00000494047 SRRTQ9BXP5 876 aaKnown RBP13.27□□□□□ -0.29
RFC4-214ENST00000494047 RNF41Q9H4P4 317 aaPredicted RBP13.27□□□□□ -0.29
RFC4-214ENST00000494047 ZBTB3Q9H5J0 574 aa13.27□□□□□ -0.29
RFC4-214ENST00000494047 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.27□□□□□ -0.29
RFC4-214ENST00000494047 LAMB2P55268 1798 aa13.27□□□□□ -0.29
RFC4-214ENST00000494047 CUTAO60888 179 aa13.26□□□□□ -0.29
RFC4-214ENST00000494047 ZPR1O75312 459 aa13.26□□□□□ -0.29
RFC4-214ENST00000494047 PCP11498 1178 aaKnown RBP13.26□□□□□ -0.29
RFC4-214ENST00000494047 CTSWP56202 376 aa13.26□□□□□ -0.29
RFC4-214ENST00000494047 CCT2P78371 535 aaKnown RBP13.26□□□□□ -0.29
RFC4-214ENST00000494047 KIF23Q02241 960 aaPredicted RBP13.26□□□□□ -0.29
RFC4-214ENST00000494047 PUM3Q15397 648 aaKnown RBP13.26□□□□□ -0.29
RFC4-214ENST00000494047 LRRC24Q50LG9 513 aa13.26□□□□□ -0.29
RFC4-214ENST00000494047 OLFM4Q6UX06 510 aa13.26□□□□□ -0.29
RFC4-214ENST00000494047 DHX40Q8IX18 779 aaKnown RBP13.26□□□□□ -0.29
RFC4-214ENST00000494047 TRIML1Q8N9V2 468 aa13.26□□□□□ -0.29
RFC4-214ENST00000494047 LPIN2Q92539 896 aa13.26□□□□□ -0.29
RFC4-214ENST00000494047 ERO1AQ96HE7 468 aa13.26□□□□□ -0.29
RFC4-214ENST00000494047 NACAP1Q9BZK3 213 aa13.26□□□□□ -0.29
RFC4-214ENST00000494047 RTL9Q8NET4 1388 aa13.26□□□□□ -0.29
RFC4-214ENST00000494047 PDE8AO60658 829 aa13.25□□□□□ -0.29
RFC4-214ENST00000494047 SKILP12757 684 aa13.25□□□□□ -0.29
RFC4-214ENST00000494047 GYS1P13807 737 aa13.25□□□□□ -0.29
RFC4-214ENST00000494047 XBP1P17861 261 aa13.25□□□□□ -0.29
RFC4-214ENST00000494047 MAP3K12Q12852 859 aa13.25□□□□□ -0.29
RFC4-214ENST00000494047 LDHAL6AQ6ZMR3 332 aa13.25□□□□□ -0.29
RFC4-214ENST00000494047 TRIM22Q8IYM9 498 aa13.25□□□□□ -0.29
RFC4-214ENST00000494047 PYM1Q9BRP8 204 aaKnown RBP13.25□□□□□ -0.29
RFC4-214ENST00000494047 CCDC69A6NI79 296 aa13.24□□□□□ -0.29
RFC4-214ENST00000494047 SH2B2O14492 632 aaPredicted RBP13.24□□□□□ -0.29
RFC4-214ENST00000494047 RGL2O15211 777 aa13.24□□□□□ -0.29
RFC4-214ENST00000494047 TPM1P09493 284 aa13.24□□□□□ -0.29
RFC4-214ENST00000494047 SLC5A1P13866 664 aa13.24□□□□□ -0.29
RFC4-214ENST00000494047 FDPSP14324 419 aaKnown RBP13.24□□□□□ -0.29
RFC4-214ENST00000494047 U2AF2P26368 475 aaKnown RBP eCLIP13.24□□□□□ -0.294e-7■■□□□ 12.4
RFC4-214ENST00000494047 SYKP43405 635 aa13.24□□□□□ -0.29
RFC4-214ENST00000494047 TPRNQ4KMQ1 711 aa13.24□□□□□ -0.29
RFC4-214ENST00000494047 RILPL1Q5EBL4 403 aa13.24□□□□□ -0.29
RFC4-214ENST00000494047 C11orf57Q6ZUT1 292 aaPredicted RBP13.24□□□□□ -0.29
RFC4-214ENST00000494047 NYAP1Q6ZVC0 841 aa13.24□□□□□ -0.29
RFC4-214ENST00000494047 SMIM5Q71RC9 77 aa13.24□□□□□ -0.29
RFC4-214ENST00000494047 CACTINQ8WUQ7 758 aaKnown RBP13.24□□□□□ -0.29
RFC4-214ENST00000494047 LRRC2Q9BYS8 371 aa13.24□□□□□ -0.29
RFC4-214ENST00000494047 GOLPH3LQ9H4A5 285 aa13.24□□□□□ -0.29
RFC4-214ENST00000494047 CNNM1Q9NRU3 951 aa13.24□□□□□ -0.29
RFC4-214ENST00000494047 NARFQ9UHQ1 456 aa13.24□□□□□ -0.29
RFC4-214ENST00000494047 TUBE1Q9UJT0 475 aa13.24□□□□□ -0.29
RFC4-214ENST00000494047 ZBTB1Q9Y2K1 713 aa13.24□□□□□ -0.29
RFC4-214ENST00000494047 RIPOR2Q9Y4F9 1068 aa13.24□□□□□ -0.29
RFC4-214ENST00000494047 PARP3Q9Y6F1 533 aa13.24□□□□□ -0.29
RFC4-214ENST00000494047 ERICH2A1L162 156 aa13.23□□□□□ -0.29
RFC4-214ENST00000494047 ZBTB43O43298 467 aa13.23□□□□□ -0.29
RFC4-214ENST00000494047 ZNF202O95125 648 aa13.23□□□□□ -0.29
RFC4-214ENST00000494047 PDE8BO95263 885 aa13.23□□□□□ -0.29
RFC4-214ENST00000494047 A1BGP04217 495 aa13.23□□□□□ -0.29
RFC4-214ENST00000494047 MMP10P09238 476 aa13.23□□□□□ -0.29
RFC4-214ENST00000494047 IL6STP40189 918 aaPredicted RBP13.23□□□□□ -0.29
RFC4-214ENST00000494047 IARSP41252 1262 aaKnown RBP13.23□□□□□ -0.29
RFC4-214ENST00000494047 EIF5P55010 431 aaKnown RBP13.23□□□□□ -0.29
RFC4-214ENST00000494047 MYL5Q02045 173 aa13.23□□□□□ -0.29
RFC4-214ENST00000494047 CEBPZQ03701 1054 aaKnown RBP13.23□□□□□ -0.29
RFC4-214ENST00000494047 AOPEPQ8N6M6 819 aa13.23□□□□□ -0.29
RFC4-214ENST00000494047 AIDAQ96BJ3 306 aa13.23□□□□□ -0.29
RFC4-214ENST00000494047 C16orf45Q96MC5 204 aaPredicted RBP13.23□□□□□ -0.29
RFC4-214ENST00000494047 ALG1Q9BT22 464 aa13.23□□□□□ -0.29
RFC4-214ENST00000494047 OGFRQ9NZT2 677 aa13.23□□□□□ -0.29
RFC4-214ENST00000494047 NUP98P52948 1817 aa13.23□□□□□ -0.29
RFC4-214ENST00000494047 ZSCAN12O43309 604 aa13.22□□□□□ -0.29
RFC4-214ENST00000494047 ITGA6P23229 1130 aa13.22□□□□□ -0.29
RFC4-214ENST00000494047 ZAP70P43403 619 aa13.22□□□□□ -0.29
RFC4-214ENST00000494047 TUBB4BP68371 445 aa13.22□□□□□ -0.29
RFC4-214ENST00000494047 PARP10Q53GL7 1025 aa13.22□□□□□ -0.29
RFC4-214ENST00000494047 CCDC102BQ68D86 513 aa13.22□□□□□ -0.29
RFC4-214ENST00000494047 APOA5Q6Q788 366 aa13.22□□□□□ -0.29
RFC4-214ENST00000494047 CCAR2Q8N163 923 aaKnown RBP13.22□□□□□ -0.29
RFC4-214ENST00000494047 ZNF579Q8NAF0 562 aaKnown RBP13.22□□□□□ -0.29
RFC4-214ENST00000494047 NCOA5Q9HCD5 579 aaKnown RBP13.22□□□□□ -0.29
RFC4-214ENST00000494047 IQSEC3Q9UPP2 1182 aaPredicted RBP13.22□□□□□ -0.29
RFC4-214ENST00000494047 HPS5Q9UPZ3 1129 aa13.22□□□□□ -0.29
RFC4-214ENST00000494047 HPSEQ9Y251 543 aa13.22□□□□□ -0.29
RFC4-214ENST00000494047 PHLPP2Q6ZVD8 1323 aa13.21□□□□□ -0.29
RFC4-214ENST00000494047 PATL2C9JE40 543 aaKnown RBP13.21□□□□□ -0.29
RFC4-214ENST00000494047 GRIN3BO60391 1043 aa13.21□□□□□ -0.29
RFC4-214ENST00000494047 KIF20AO95235 890 aa13.21□□□□□ -0.29
RFC4-214ENST00000494047 IFNAR1P17181 557 aa13.21□□□□□ -0.29
RFC4-214ENST00000494047 NDUFA8P51970 172 aa13.21□□□□□ -0.29
RFC4-214ENST00000494047 TGFB2P61812 414 aa13.21□□□□□ -0.29
RFC4-214ENST00000494047 GABPB1Q06547 395 aaPredicted RBP13.21□□□□□ -0.29
RFC4-214ENST00000494047 SSRP1Q08945 709 aaKnown RBP13.21□□□□□ -0.29
RFC4-214ENST00000494047 GPR162Q16538 588 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms