RNA–Protein interactions for RNA: ENST00000494016.1

CPSF7-213, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 2

Gene CPSF7, Length 656 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-213ENST00000494016 PRMT3O60678 531 aa7.46□□□□□ -1.22
CPSF7-213ENST00000494016 TMCO4Q5TGY1 634 aa7.46□□□□□ -1.22
CPSF7-213ENST00000494016 C16orf71Q8IYS4 520 aaPredicted RBP7.46□□□□□ -1.22
CPSF7-213ENST00000494016 GPR161Q8N6U8 529 aaKnown RBP7.46□□□□□ -1.22
CPSF7-213ENST00000494016 RGS22Q8NE09 1264 aa7.46□□□□□ -1.22
CPSF7-213ENST00000494016 ZIC5Q96T25 663 aa7.46□□□□□ -1.22
CPSF7-213ENST00000494016 STK31Q9BXU1 1019 aa7.46□□□□□ -1.22
CPSF7-213ENST00000494016 PHAXQ9H814 394 aaKnown RBP7.46□□□□□ -1.22
CPSF7-213ENST00000494016 USP21Q9UK80 565 aa7.46□□□□□ -1.22
CPSF7-213ENST00000494016 HCN4Q9Y3Q4 1203 aa7.46□□□□□ -1.22
CPSF7-213ENST00000494016 GPC6Q9Y625 555 aaPredicted RBP7.46□□□□□ -1.22
CPSF7-213ENST00000494016 HEG1Q9ULI3 1381 aa7.46□□□□□ -1.22
CPSF7-213ENST00000494016 FAM208AQ9UK61 1670 aaKnown RBP7.45□□□□□ -1.22
CPSF7-213ENST00000494016 BTBD11A6QL63 1104 aa7.45□□□□□ -1.22
CPSF7-213ENST00000494016 HOXB7P09629 217 aa7.45□□□□□ -1.22
CPSF7-213ENST00000494016 ATP8B2P98198 1209 aa7.45□□□□□ -1.22
CPSF7-213ENST00000494016 UBAP2LQ14157 1087 aaKnown RBP7.45□□□□□ -1.22
CPSF7-213ENST00000494016 EFHC2Q5JST6 749 aa7.45□□□□□ -1.22
CPSF7-213ENST00000494016 SLC4A10Q6U841 1118 aa7.45□□□□□ -1.22
CPSF7-213ENST00000494016 NLRP8Q86W28 1048 aa7.45□□□□□ -1.22
CPSF7-213ENST00000494016 TRAIPQ9BWF2 469 aa7.45□□□□□ -1.22
CPSF7-213ENST00000494016 PHACTR1Q9C0D0 580 aa7.45□□□□□ -1.22
CPSF7-213ENST00000494016 CXXC1Q9P0U4 656 aaPredicted RBP7.45□□□□□ -1.22
CPSF7-213ENST00000494016 TRPC5Q9UL62 973 aaPredicted RBP7.45□□□□□ -1.22
CPSF7-213ENST00000494016 USTQ9Y2C2 406 aa7.45□□□□□ -1.22
CPSF7-213ENST00000494016 SIPA1L3O60292 1781 aaPredicted RBP7.45□□□□□ -1.22
CPSF7-213ENST00000494016 COL14A1Q05707 1796 aaKnown RBP7.45□□□□□ -1.22
CPSF7-213ENST00000494016 ADAMTS7Q9UKP4 1686 aa7.44□□□□□ -1.22
CPSF7-213ENST00000494016 A0A1W2PNR3 127 aa7.44□□□□□ -1.22
CPSF7-213ENST00000494016 SMARCA5O60264 1052 aaPredicted RBP7.44□□□□□ -1.22
CPSF7-213ENST00000494016 GDF11O95390 407 aa7.44□□□□□ -1.22
CPSF7-213ENST00000494016 RBM25P49756 843 aaKnown RBP7.44□□□□□ -1.22
CPSF7-213ENST00000494016 FKBP5Q13451 457 aaPredicted RBP7.44□□□□□ -1.22
CPSF7-213ENST00000494016 ARSJQ5FYB0 599 aaPredicted RBP7.44□□□□□ -1.22
CPSF7-213ENST00000494016 BMP2KLQ5H9B9 411 aa7.44□□□□□ -1.22
CPSF7-213ENST00000494016 ALDH16A1Q8IZ83 802 aa7.44□□□□□ -1.22
CPSF7-213ENST00000494016 GTPBP3Q969Y2 492 aaKnown RBP7.44□□□□□ -1.22
CPSF7-213ENST00000494016 USP44Q9H0E7 712 aa7.44□□□□□ -1.22
CPSF7-213ENST00000494016 OVOS2A0A0G2JMS6 1433 aa7.44□□□□□ -1.22
CPSF7-213ENST00000494016 N4BP2Q86UW6 1770 aaPredicted RBP7.43□□□□□ -1.22
CPSF7-213ENST00000494016 GNAI2P04899 355 aa7.43□□□□□ -1.22
CPSF7-213ENST00000494016 EIF2S2P20042 333 aaKnown RBP7.43□□□□□ -1.22
CPSF7-213ENST00000494016 GSK3AP49840 483 aa7.43□□□□□ -1.22
CPSF7-213ENST00000494016 TEFQ10587 303 aa7.43□□□□□ -1.22
CPSF7-213ENST00000494016 C1orf141Q5JVX7 400 aa7.43□□□□□ -1.22
CPSF7-213ENST00000494016 BICDL1Q6ZP65 573 aa7.43□□□□□ -1.22
CPSF7-213ENST00000494016 RHPN1Q8TCX5 695 aa7.43□□□□□ -1.22
CPSF7-213ENST00000494016 OTUD7AQ8TE49 926 aaPredicted RBP7.43□□□□□ -1.22
CPSF7-213ENST00000494016 C22orf23Q9BZE7 217 aa7.43□□□□□ -1.22
CPSF7-213ENST00000494016 NLRP2Q9NX02 1062 aa7.43□□□□□ -1.22
CPSF7-213ENST00000494016 MTMR7Q9Y216 660 aa7.43□□□□□ -1.22
CPSF7-213ENST00000494016 SCN11AQ9UI33 1791 aa7.42□□□□□ -1.22
CPSF7-213ENST00000494016 PRAMEF22A3QJZ6 481 aa7.42□□□□□ -1.22
CPSF7-213ENST00000494016 GNAI3P08754 354 aa7.42□□□□□ -1.22
CPSF7-213ENST00000494016 GSPT1P15170 499 aaKnown RBP7.42□□□□□ -1.22
CPSF7-213ENST00000494016 ATP2B4P23634 1241 aa7.42□□□□□ -1.22
CPSF7-213ENST00000494016 CHRNA2Q15822 529 aa7.42□□□□□ -1.22
CPSF7-213ENST00000494016 FOXR1Q6PIV2 292 aa7.42□□□□□ -1.22
CPSF7-213ENST00000494016 RETREG2Q8NC44 543 aa7.42□□□□□ -1.22
CPSF7-213ENST00000494016 COL26A1Q96A83 441 aa7.42□□□□□ -1.22
CPSF7-213ENST00000494016 VTI1AQ96AJ9 217 aa7.42□□□□□ -1.22
CPSF7-213ENST00000494016 CHPF2Q9P2E5 772 aa7.42□□□□□ -1.22
CPSF7-213ENST00000494016 THSD7AQ9UPZ6 1657 aa7.41□□□□□ -1.22
CPSF7-213ENST00000494016 PNMA6EA0A0J9YXQ4 647 aa7.41□□□□□ -1.22
CPSF7-213ENST00000494016 CARNS1A5YM72 827 aa7.41□□□□□ -1.22
CPSF7-213ENST00000494016 HMMRO75330 724 aa7.41□□□□□ -1.22
CPSF7-213ENST00000494016 ANXA1P04083 346 aa7.41□□□□□ -1.22
CPSF7-213ENST00000494016 PHKG2P15735 406 aa7.41□□□□□ -1.22
CPSF7-213ENST00000494016 MFAP1P55081 439 aaKnown RBP7.41□□□□□ -1.22
CPSF7-213ENST00000494016 RASSF7Q02833 373 aa7.41□□□□□ -1.22
CPSF7-213ENST00000494016 RTN1Q16799 776 aa7.41□□□□□ -1.22
CPSF7-213ENST00000494016 PROSER3Q2NL68 480 aa7.41□□□□□ -1.22
CPSF7-213ENST00000494016 BEND3Q5T5X7 828 aa7.41□□□□□ -1.22
CPSF7-213ENST00000494016 TTC22Q5TAA0 569 aa7.41□□□□□ -1.22
CPSF7-213ENST00000494016 SAMD5Q5TGI4 173 aa7.41□□□□□ -1.22
CPSF7-213ENST00000494016 FIGNL1Q6PIW4 674 aa7.41□□□□□ -1.22
CPSF7-213ENST00000494016 DEFB132Q7Z7B7 95 aa7.41□□□□□ -1.22
CPSF7-213ENST00000494016 KLRG1Q96E93 195 aa7.41□□□□□ -1.22
CPSF7-213ENST00000494016 ZCCHC2Q9C0B9 1178 aaKnown RBP7.41□□□□□ -1.22
CPSF7-213ENST00000494016 UPF2Q9HAU5 1272 aaKnown RBP7.41□□□□□ -1.22
CPSF7-213ENST00000494016 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.41□□□□□ -1.22
CPSF7-213ENST00000494016 NDFIP2Q9NV92 336 aa7.41□□□□□ -1.22
CPSF7-213ENST00000494016 SPG7Q9UQ90 795 aa7.41□□□□□ -1.22
CPSF7-213ENST00000494016 CPDO75976 1380 aa7.41□□□□□ -1.22
CPSF7-213ENST00000494016 ABCC6O95255 1503 aa7.41□□□□□ -1.22
CPSF7-213ENST00000494016 PI4KAP2A4QPH2 592 aa7.4□□□□□ -1.22
CPSF7-213ENST00000494016 GPR25O00155 361 aa7.4□□□□□ -1.22
CPSF7-213ENST00000494016 CYP27B1O15528 508 aa7.4□□□□□ -1.22
CPSF7-213ENST00000494016 SSFA2P28290 1259 aa7.4□□□□□ -1.22
CPSF7-213ENST00000494016 GAS6Q14393 721 aa7.4□□□□□ -1.22
CPSF7-213ENST00000494016 PI4KAP1Q8N8J0 262 aa7.4□□□□□ -1.22
CPSF7-213ENST00000494016 SSH3Q8TE77 659 aa7.4□□□□□ -1.22
CPSF7-213ENST00000494016 DNAAF4Q8WXU2 420 aa7.4□□□□□ -1.22
CPSF7-213ENST00000494016 RAPGEF4Q8WZA2 1011 aa7.4□□□□□ -1.22
CPSF7-213ENST00000494016 MYO19Q96H55 970 aa7.4□□□□□ -1.22
CPSF7-213ENST00000494016 TRERF1Q96PN7 1200 aa7.4□□□□□ -1.22
CPSF7-213ENST00000494016 KIF2CQ99661 725 aa7.4□□□□□ -1.22
CPSF7-213ENST00000494016 CFHR5Q9BXR6 569 aa7.4□□□□□ -1.22
CPSF7-213ENST00000494016 COL25A1Q9BXS0 654 aaPredicted RBP7.4□□□□□ -1.22
CPSF7-213ENST00000494016 SLC52A2Q9HAB3 445 aa7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms