RNA–Protein interactions for RNA: ENST00000493815.5

PDLIM7-208, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best)

Gene PDLIM7, Length 1,686 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-208ENST00000493815 CST9Q5W186 159 aa21.51■■□□□ 1.03
PDLIM7-208ENST00000493815 CWC27Q6UX04 472 aaKnown RBP21.51■■□□□ 1.03
PDLIM7-208ENST00000493815 SH3BP5LQ7L8J4 393 aa21.51■■□□□ 1.03
PDLIM7-208ENST00000493815 FAM151AQ8WW52 585 aa21.51■■□□□ 1.03
PDLIM7-208ENST00000493815 STRBPQ96SI9 672 aaKnown RBP21.51■■□□□ 1.03
PDLIM7-208ENST00000493815 CRNKL1Q9BZJ0 848 aaKnown RBP21.51■■□□□ 1.03
PDLIM7-208ENST00000493815 DIAPH3Q9NSV4 1193 aa21.51■■□□□ 1.03
PDLIM7-208ENST00000493815 SAP30BPQ9UHR5 308 aaKnown RBP21.51■■□□□ 1.03
PDLIM7-208ENST00000493815 PRKG1Q13976 671 aa21.5■■□□□ 1.03
PDLIM7-208ENST00000493815 BMP2KLQ5H9B9 411 aa21.5■■□□□ 1.03
PDLIM7-208ENST00000493815 ZSCAN29Q8IWY8 852 aaPredicted RBP21.5■■□□□ 1.03
PDLIM7-208ENST00000493815 DDTLA6NHG4 134 aaPredicted RBP21.5■■□□□ 1.03
PDLIM7-208ENST00000493815 ENTPD3O75355 529 aa21.5■■□□□ 1.03
PDLIM7-208ENST00000493815 SLURP2P0DP57 97 aa21.5■■□□□ 1.03
PDLIM7-208ENST00000493815 C1QTNF8P60827 252 aa21.5■■□□□ 1.03
PDLIM7-208ENST00000493815 OSBPL5Q9H0X9 879 aaPredicted RBP21.5■■□□□ 1.03
PDLIM7-208ENST00000493815 PPP2R3BQ9Y5P8 575 aa21.5■■□□□ 1.03
PDLIM7-208ENST00000493815 SLC4A4Q9Y6R1 1079 aa21.5■■□□□ 1.03
PDLIM7-208ENST00000493815 CERS3Q8IU89 383 aa21.49■■□□□ 1.03
PDLIM7-208ENST00000493815 AK9Q5TCS8 1911 aa21.49■■□□□ 1.03
PDLIM7-208ENST00000493815 MOB2Q70IA6 237 aa21.48■■□□□ 1.03
PDLIM7-208ENST00000493815 ZNF589Q86UQ0 364 aaPredicted RBP21.48■■□□□ 1.03
PDLIM7-208ENST00000493815 HELLSQ9NRZ9 838 aa21.48■■□□□ 1.03
PDLIM7-208ENST00000493815 PALD1Q9ULE6 856 aa21.48■■□□□ 1.03
PDLIM7-208ENST00000493815 SSC5DA1L4H1 1573 aa21.47■■□□□ 1.03
PDLIM7-208ENST00000493815 CHMLP26374 656 aa21.47■■□□□ 1.03
PDLIM7-208ENST00000493815 MCMDC2Q4G0Z9 681 aa21.47■■□□□ 1.03
PDLIM7-208ENST00000493815 MIGA2Q7L4E1 593 aa21.47■■□□□ 1.03
PDLIM7-208ENST00000493815 IL25Q9H293 177 aa21.47■■□□□ 1.03
PDLIM7-208ENST00000493815 NPM3O75607 178 aaKnown RBP21.47■■□□□ 1.03
PDLIM7-208ENST00000493815 CSRNP1Q96S65 589 aa21.47■■□□□ 1.03
PDLIM7-208ENST00000493815 DCP1AQ9NPI6 582 aaPredicted RBP21.47■■□□□ 1.03
PDLIM7-208ENST00000493815 MKRN1Q9UHC7 482 aaKnown RBP21.47■■□□□ 1.03
PDLIM7-208ENST00000493815 CDK5RAP2Q96SN8 1893 aa21.46■■□□□ 1.03
PDLIM7-208ENST00000493815 HIP1O00291 1037 aa21.46■■□□□ 1.03
PDLIM7-208ENST00000493815 EVX2Q03828 476 aa21.46■■□□□ 1.03
PDLIM7-208ENST00000493815 SUPT20HL1Q3ZLR7 823 aa21.46■■□□□ 1.03
PDLIM7-208ENST00000493815 VPS53Q5VIR6 699 aa21.46■■□□□ 1.03
PDLIM7-208ENST00000493815 TICAM2Q86XR7 235 aa21.46■■□□□ 1.03
PDLIM7-208ENST00000493815 GSG1L2A8MUP6 293 aa21.45■■□□□ 1.02
PDLIM7-208ENST00000493815 APPP05067 770 aa21.45■■□□□ 1.02
PDLIM7-208ENST00000493815 HTRA3P83110 453 aa21.45■■□□□ 1.02
PDLIM7-208ENST00000493815 MCM9Q9NXL9 1143 aa21.45■■□□□ 1.02
PDLIM7-208ENST00000493815 FAM196BA6NMK8 535 aa21.44■■□□□ 1.02
PDLIM7-208ENST00000493815 NF2P35240 595 aa21.44■■□□□ 1.02
PDLIM7-208ENST00000493815 APLP1P51693 650 aa21.44■■□□□ 1.02
PDLIM7-208ENST00000493815 TTLL12Q14166 644 aaPredicted RBP21.44■■□□□ 1.02
PDLIM7-208ENST00000493815 RPAP1Q9BWH6 1393 aaPredicted RBP21.44■■□□□ 1.02
PDLIM7-208ENST00000493815 TMEM88BA6NKF7 163 aa21.44■■□□□ 1.02
PDLIM7-208ENST00000493815 FOXP2O15409 715 aa21.44■■□□□ 1.02
PDLIM7-208ENST00000493815 CYP2D6P10635 497 aa21.44■■□□□ 1.02
PDLIM7-208ENST00000493815 GBA2Q9HCG7 927 aaPredicted RBP21.44■■□□□ 1.02
PDLIM7-208ENST00000493815 EPB41L4AQ9HCS5 686 aaPredicted RBP21.44■■□□□ 1.02
PDLIM7-208ENST00000493815 ATP8A2Q9NTI2 1148 aa21.44■■□□□ 1.02
PDLIM7-208ENST00000493815 ATRNL1Q5VV63 1379 aa21.43■■□□□ 1.02
PDLIM7-208ENST00000493815 CYP2D7A0A087X1C5 515 aa21.43■■□□□ 1.02
PDLIM7-208ENST00000493815 SMIM22K7EJ46 135 aa21.43■■□□□ 1.02
PDLIM7-208ENST00000493815 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.43■■□□□ 1.02
PDLIM7-208ENST00000493815 FOCADQ5VW36 1801 aa21.43■■□□□ 1.02
PDLIM7-208ENST00000493815 CCDC171Q6TFL3 1326 aa21.42■■□□□ 1.02
PDLIM7-208ENST00000493815 UBE2Q2LH0YL09 131 aa21.42■■□□□ 1.02
PDLIM7-208ENST00000493815 GNAT2P19087 354 aa21.42■■□□□ 1.02
PDLIM7-208ENST00000493815 PLCD1P51178 756 aa21.42■■□□□ 1.02
PDLIM7-208ENST00000493815 ANGEL1Q9UNK9 670 aaKnown RBP21.42■■□□□ 1.02
PDLIM7-208ENST00000493815 PATL2C9JE40 543 aaKnown RBP21.41■■□□□ 1.02
PDLIM7-208ENST00000493815 USP17L12C9JPN9 530 aa21.41■■□□□ 1.02
PDLIM7-208ENST00000493815 USP17L21D6R901 530 aa21.41■■□□□ 1.02
PDLIM7-208ENST00000493815 POLR3DP05423 398 aaPredicted RBP21.41■■□□□ 1.02
PDLIM7-208ENST00000493815 C2orf69Q8N8R5 385 aa21.41■■□□□ 1.02
PDLIM7-208ENST00000493815 DHX36Q9H2U1 1008 aaKnown RBP21.41■■□□□ 1.02
PDLIM7-208ENST00000493815 ABT1Q9ULW3 272 aaKnown RBP21.41■■□□□ 1.02
PDLIM7-208ENST00000493815 PPP1R12BO60237 982 aaPredicted RBP21.4■■□□□ 1.02
PDLIM7-208ENST00000493815 USP2O75604 605 aaPredicted RBP21.4■■□□□ 1.02
PDLIM7-208ENST00000493815 IFNL3Q8IZI9 196 aa21.4■■□□□ 1.02
PDLIM7-208ENST00000493815 DDRGK1Q96HY6 314 aa21.4■■□□□ 1.02
PDLIM7-208ENST00000493815 PI4KBQ9UBF8 816 aa21.4■■□□□ 1.02
PDLIM7-208ENST00000493815 TRPM7Q96QT4 1865 aa21.4■■□□□ 1.02
PDLIM7-208ENST00000493815 HSPD1P10809 573 aaKnown RBP21.4■■□□□ 1.02
PDLIM7-208ENST00000493815 TDO2P48775 406 aa21.4■■□□□ 1.02
PDLIM7-208ENST00000493815 CTR9Q6PD62 1173 aa21.4■■□□□ 1.02
PDLIM7-208ENST00000493815 COL2A1P02458 1487 aaPredicted RBP21.39■■□□□ 1.01
PDLIM7-208ENST00000493815 CDC45O75419 566 aa21.39■■□□□ 1.01
PDLIM7-208ENST00000493815 HSPA6P17066 643 aa21.39■■□□□ 1.01
PDLIM7-208ENST00000493815 NAV1Q8NEY1 1877 aa21.39■■□□□ 1.01
PDLIM7-208ENST00000493815 BAZ2AQ9UIF9 1905 aaKnown RBP21.39■■□□□ 1.01
PDLIM7-208ENST00000493815 HLA-DOAP06340 250 aa21.38■■□□□ 1.01
PDLIM7-208ENST00000493815 HUNKP57058 714 aa21.38■■□□□ 1.01
PDLIM7-208ENST00000493815 DCAF15Q66K64 600 aa21.38■■□□□ 1.01
PDLIM7-208ENST00000493815 ARMC9Q7Z3E5 817 aa21.38■■□□□ 1.01
PDLIM7-208ENST00000493815 SAPCD2Q86UD0 394 aa21.38■■□□□ 1.01
PDLIM7-208ENST00000493815 STK11IPQ8N1F8 1099 aa21.38■■□□□ 1.01
PDLIM7-208ENST00000493815 RUFY2Q8WXA3 655 aa21.38■■□□□ 1.01
PDLIM7-208ENST00000493815 NACAP1Q9BZK3 213 aa21.38■■□□□ 1.01
PDLIM7-208ENST00000493815 DNAJC18Q9H819 358 aa21.38■■□□□ 1.01
PDLIM7-208ENST00000493815 XPO5Q9HAV4 1204 aaKnown RBP eCLIP21.38■■□□□ 1.012e-6■■■■■ 52.9
PDLIM7-208ENST00000493815 CREBZFQ9NS37 354 aa21.38■■□□□ 1.01
PDLIM7-208ENST00000493815 MYH1P12882 1939 aa21.38■■□□□ 1.01
PDLIM7-208ENST00000493815 MINDY4BA8MYZ0 360 aa21.37■■□□□ 1.01
PDLIM7-208ENST00000493815 SGSM2O43147 1006 aa21.37■■□□□ 1.01
PDLIM7-208ENST00000493815 GIMAP6Q6P9H5 292 aa21.37■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms